Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
LIN7CQ9NUP9 HMGB1P12-201ENST00000438594 598 ntBASIC3.63□□□□□ -1.83
LIN7CQ9NUP9 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.63□□□□□ -1.83
LIN7CQ9NUP9 ARL2BPP10-201ENST00000446487 531 ntBASIC3.63□□□□□ -1.83
LIN7CQ9NUP9 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.63□□□□□ -1.83
LIN7CQ9NUP9 ABCF2P2-201ENST00000450549 296 ntBASIC3.63□□□□□ -1.83
LIN7CQ9NUP9 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
LIN7CQ9NUP9 AC010469.1-201ENST00000463864 576 ntBASIC3.63□□□□□ -1.83
LIN7CQ9NUP9 AC006512.1-201ENST00000468816 291 ntBASIC3.63□□□□□ -1.83
LIN7CQ9NUP9 KRTAP5-14P-201ENST00000502328 121 ntBASIC3.63□□□□□ -1.83
LIN7CQ9NUP9 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.63□□□□□ -1.83
LIN7CQ9NUP9 SNORD27.1-201ENST00000516319 72 ntBASIC3.63□□□□□ -1.83
LIN7CQ9NUP9 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.63□□□□□ -1.83
LIN7CQ9NUP9 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.63□□□□□ -1.83
LIN7CQ9NUP9 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.63□□□□□ -1.83
LIN7CQ9NUP9 AP001781.1-201ENST00000530977 207 ntBASIC3.63□□□□□ -1.83
LIN7CQ9NUP9 AL512360.1-201ENST00000555346 234 ntBASIC3.63□□□□□ -1.83
LIN7CQ9NUP9 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.63□□□□□ -1.83
LIN7CQ9NUP9 HMGB1P6-201ENST00000569046 646 ntBASIC3.63□□□□□ -1.83
LIN7CQ9NUP9 MIR4700-201ENST00000578311 74 ntBASIC3.63□□□□□ -1.83
LIN7CQ9NUP9 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.63□□□□□ -1.83
LIN7CQ9NUP9 AC067852.3-201ENST00000589177 561 ntBASIC3.63□□□□□ -1.83
LIN7CQ9NUP9 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.63□□□□□ -1.83
LIN7CQ9NUP9 AC008638.3-201ENST00000603341 463 ntBASIC3.63□□□□□ -1.83
LIN7CQ9NUP9 AC007363.1-201ENST00000604736 620 ntBASIC3.63□□□□□ -1.83
LIN7CQ9NUP9 AP001330.5-201ENST00000607176 411 ntBASIC3.63□□□□□ -1.83
LIN7CQ9NUP9 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.63□□□□□ -1.83
LIN7CQ9NUP9 AC090132.2-201ENST00000615881 347 ntBASIC3.63□□□□□ -1.83
LIN7CQ9NUP9 RN7SL722P-201ENST00000617780 284 ntBASIC3.63□□□□□ -1.83
LIN7CQ9NUP9 RN7SL565P-201ENST00000618246 284 ntBASIC3.63□□□□□ -1.83
LIN7CQ9NUP9 AP005019.3-201ENST00000620418 560 ntBASIC3.63□□□□□ -1.83
LIN7CQ9NUP9 AC005609.4-201ENST00000625071 447 ntBASIC3.63□□□□□ -1.83
LIN7CQ9NUP9 AC006065.6-201ENST00000625201 545 ntBASIC3.63□□□□□ -1.83
LIN7CQ9NUP9 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.63□□□□□ -1.83
LIN7CQ9NUP9 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
LIN7CQ9NUP9 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
LIN7CQ9NUP9 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
LIN7CQ9NUP9 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
LIN7CQ9NUP9 OR56B2P-202ENST00000641377 2453 ntBASIC3.63□□□□□ -1.83
LIN7CQ9NUP9 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.63□□□□□ -1.83
LIN7CQ9NUP9 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
LIN7CQ9NUP9 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
LIN7CQ9NUP9 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
LIN7CQ9NUP9 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
LIN7CQ9NUP9 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.62□□□□□ -1.83
LIN7CQ9NUP9 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC3.62□□□□□ -1.83
LIN7CQ9NUP9 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.62□□□□□ -1.83
LIN7CQ9NUP9 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.62□□□□□ -1.83
LIN7CQ9NUP9 MARK2P15-201ENST00000432204 2186 ntBASIC3.62□□□□□ -1.83
LIN7CQ9NUP9 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
LIN7CQ9NUP9 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
LIN7CQ9NUP9 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.62□□□□□ -1.83
LIN7CQ9NUP9 AL137003.2-201ENST00000606924 2538 ntBASIC3.62□□□□□ -1.83
LIN7CQ9NUP9 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
LIN7CQ9NUP9 Y_RNA.9-201ENST00000362354 101 ntBASIC3.62□□□□□ -1.83
LIN7CQ9NUP9 SNORA24.1-201ENST00000384401 135 ntBASIC3.62□□□□□ -1.83
LIN7CQ9NUP9 RNU6-14P-201ENST00000384630 106 ntBASIC3.62□□□□□ -1.83
LIN7CQ9NUP9 SNORD115-47-201ENST00000391226 86 ntBASIC3.62□□□□□ -1.83
LIN7CQ9NUP9 BTF3P7-201ENST00000407097 488 ntBASIC3.62□□□□□ -1.83
LIN7CQ9NUP9 MIR1911-201ENST00000410783 80 ntBASIC3.62□□□□□ -1.83
LIN7CQ9NUP9 AL160275.2-201ENST00000412010 394 ntBASIC3.62□□□□□ -1.83
LIN7CQ9NUP9 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
LIN7CQ9NUP9 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.62□□□□□ -1.83
LIN7CQ9NUP9 ZNF90P2-204ENST00000419323 1075 ntBASIC3.62□□□□□ -1.83
LIN7CQ9NUP9 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.62□□□□□ -1.83
LIN7CQ9NUP9 NDUFB4P7-201ENST00000423198 363 ntBASIC3.62□□□□□ -1.83
LIN7CQ9NUP9 AC091390.3-201ENST00000426478 338 ntBASIC3.62□□□□□ -1.83
LIN7CQ9NUP9 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.62□□□□□ -1.83
LIN7CQ9NUP9 RPL7P54-201ENST00000438336 674 ntBASIC3.62□□□□□ -1.83
LIN7CQ9NUP9 RPL23AP93-201ENST00000440847 484 ntBASIC3.62□□□□□ -1.83
LIN7CQ9NUP9 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.62□□□□□ -1.83
LIN7CQ9NUP9 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.62□□□□□ -1.83
LIN7CQ9NUP9 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.62□□□□□ -1.83
LIN7CQ9NUP9 RPS27AP17-201ENST00000463344 455 ntBASIC3.62□□□□□ -1.83
LIN7CQ9NUP9 AL121769.1-201ENST00000469473 401 ntBASIC3.62□□□□□ -1.83
LIN7CQ9NUP9 RN7SL812P-201ENST00000493791 279 ntBASIC3.62□□□□□ -1.83
LIN7CQ9NUP9 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.62□□□□□ -1.83
LIN7CQ9NUP9 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.62□□□□□ -1.83
LIN7CQ9NUP9 Y_RNA.693-201ENST00000516641 110 ntBASIC3.62□□□□□ -1.83
LIN7CQ9NUP9 RN7SKP92-201ENST00000517266 244 ntBASIC3.62□□□□□ -1.83
LIN7CQ9NUP9 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.62□□□□□ -1.83
LIN7CQ9NUP9 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.62□□□□□ -1.83
LIN7CQ9NUP9 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.62□□□□□ -1.83
LIN7CQ9NUP9 OR5AQ1P-201ENST00000527596 927 ntBASIC3.62□□□□□ -1.83
LIN7CQ9NUP9 HIGD1AP5-201ENST00000529959 259 ntBASIC3.62□□□□□ -1.83
LIN7CQ9NUP9 AC103843.2-201ENST00000530523 682 ntBASIC3.62□□□□□ -1.83
LIN7CQ9NUP9 OR5B19P-201ENST00000531766 928 ntBASIC3.62□□□□□ -1.83
LIN7CQ9NUP9 AC004024.1-201ENST00000549244 247 ntBASIC3.62□□□□□ -1.83
LIN7CQ9NUP9 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.62□□□□□ -1.83
LIN7CQ9NUP9 AP005205.1-201ENST00000563503 508 ntBASIC3.62□□□□□ -1.83
LIN7CQ9NUP9 MIR4330-201ENST00000579077 105 ntBASIC3.62□□□□□ -1.83
LIN7CQ9NUP9 AC024619.4-201ENST00000580924 316 ntBASIC3.62□□□□□ -1.83
LIN7CQ9NUP9 AC002545.1-201ENST00000592511 181 ntBASIC3.62□□□□□ -1.83
LIN7CQ9NUP9 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.62□□□□□ -1.83
LIN7CQ9NUP9 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
LIN7CQ9NUP9 AC019278.1-201ENST00000623516 479 ntBASIC3.62□□□□□ -1.83
LIN7CQ9NUP9 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.62□□□□□ -1.83
LIN7CQ9NUP9 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
LIN7CQ9NUP9 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
LIN7CQ9NUP9 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms