Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 MTND4LP32-201ENST00000636111 270 ntBASIC4.93□□□□□ -1.62
PDLIM7Q9NR12 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.93□□□□□ -1.62
PDLIM7Q9NR12 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.93□□□□□ -1.62
PDLIM7Q9NR12 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PDLIM7Q9NR12 AL158163.1-201ENST00000603915 1649 ntBASIC4.93□□□□□ -1.62
PDLIM7Q9NR12 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.93□□□□□ -1.62
PDLIM7Q9NR12 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PDLIM7Q9NR12 NXPH1-205ENST00000602349 1953 ntBASIC4.93□□□□□ -1.62
PDLIM7Q9NR12 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.92□□□□□ -1.62
PDLIM7Q9NR12 AC004972.1-201ENST00000623934 2209 ntBASIC4.92□□□□□ -1.62
PDLIM7Q9NR12 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.92□□□□□ -1.62
PDLIM7Q9NR12 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
PDLIM7Q9NR12 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PDLIM7Q9NR12 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.92□□□□□ -1.62
PDLIM7Q9NR12 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PDLIM7Q9NR12 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.92□□□□□ -1.62
PDLIM7Q9NR12 Y_RNA.100-201ENST00000363141 102 ntBASIC4.92□□□□□ -1.62
PDLIM7Q9NR12 RNU6-254P-201ENST00000363377 107 ntBASIC4.92□□□□□ -1.62
PDLIM7Q9NR12 Y_RNA.202-201ENST00000364083 110 ntBASIC4.92□□□□□ -1.62
PDLIM7Q9NR12 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.92□□□□□ -1.62
PDLIM7Q9NR12 RNU4-66P-201ENST00000365199 138 ntBASIC4.92□□□□□ -1.62
PDLIM7Q9NR12 MIR454-201ENST00000390180 115 ntBASIC4.92□□□□□ -1.62
PDLIM7Q9NR12 VN1R36P-201ENST00000414936 291 ntBASIC4.92□□□□□ -1.62
PDLIM7Q9NR12 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PDLIM7Q9NR12 PSMA2P3-201ENST00000429685 675 ntBASIC4.92□□□□□ -1.62
PDLIM7Q9NR12 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.92□□□□□ -1.62
PDLIM7Q9NR12 RPL23AP52-201ENST00000439311 478 ntBASIC4.92□□□□□ -1.62
PDLIM7Q9NR12 BX276092.4-201ENST00000452056 248 ntBASIC4.92□□□□□ -1.62
PDLIM7Q9NR12 AC104308.1-201ENST00000454621 333 ntBASIC4.92□□□□□ -1.62
PDLIM7Q9NR12 Y_RNA.639-201ENST00000458981 102 ntBASIC4.92□□□□□ -1.62
PDLIM7Q9NR12 Y_RNA.631-201ENST00000459607 101 ntBASIC4.92□□□□□ -1.62
PDLIM7Q9NR12 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
PDLIM7Q9NR12 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.92□□□□□ -1.62
PDLIM7Q9NR12 KLHL2P1-201ENST00000508691 521 ntBASIC4.92□□□□□ -1.62
PDLIM7Q9NR12 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC4.92□□□□□ -1.62
PDLIM7Q9NR12 RPL7P20-201ENST00000520308 745 ntBASIC4.92□□□□□ -1.62
PDLIM7Q9NR12 NCAPGP2-201ENST00000557911 754 ntBASIC4.92□□□□□ -1.62
PDLIM7Q9NR12 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.92□□□□□ -1.62
PDLIM7Q9NR12 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.92□□□□□ -1.62
PDLIM7Q9NR12 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.92□□□□□ -1.62
PDLIM7Q9NR12 SNRPGP17-201ENST00000603780 214 ntBASIC4.92□□□□□ -1.62
PDLIM7Q9NR12 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.92□□□□□ -1.62
PDLIM7Q9NR12 AC084781.2-201ENST00000615568 161 ntBASIC4.92□□□□□ -1.62
PDLIM7Q9NR12 AC040168.1-201ENST00000623594 991 ntBASIC4.92□□□□□ -1.62
PDLIM7Q9NR12 AL592182.3-201ENST00000642132 3304 ntBASIC4.92□□□□□ -1.62
PDLIM7Q9NR12 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
PDLIM7Q9NR12 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PDLIM7Q9NR12 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PDLIM7Q9NR12 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PDLIM7Q9NR12 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
PDLIM7Q9NR12 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PDLIM7Q9NR12 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PDLIM7Q9NR12 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.91□□□□□ -1.62
PDLIM7Q9NR12 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC4.91□□□□□ -1.62
PDLIM7Q9NR12 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
PDLIM7Q9NR12 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PDLIM7Q9NR12 RNU5A-8P-201ENST00000364102 114 ntBASIC4.91□□□□□ -1.62
PDLIM7Q9NR12 RNU1-63P-201ENST00000383902 164 ntBASIC4.91□□□□□ -1.62
PDLIM7Q9NR12 RNU6-38P-201ENST00000384085 107 ntBASIC4.91□□□□□ -1.62
PDLIM7Q9NR12 RNU6-1297P-201ENST00000384415 104 ntBASIC4.91□□□□□ -1.62
PDLIM7Q9NR12 MIR558-201ENST00000384920 94 ntBASIC4.91□□□□□ -1.62
PDLIM7Q9NR12 RNA5SP372-201ENST00000390836 115 ntBASIC4.91□□□□□ -1.62
PDLIM7Q9NR12 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PDLIM7Q9NR12 RPL5P18-201ENST00000406671 891 ntBASIC4.91□□□□□ -1.62
PDLIM7Q9NR12 BEND7P1-201ENST00000422058 457 ntBASIC4.91□□□□□ -1.62
PDLIM7Q9NR12 MTATP6P16-201ENST00000434543 526 ntBASIC4.91□□□□□ -1.62
PDLIM7Q9NR12 MTND3P2-201ENST00000438452 342 ntBASIC4.91□□□□□ -1.62
PDLIM7Q9NR12 AL162151.2-201ENST00000448875 158 ntBASIC4.91□□□□□ -1.62
PDLIM7Q9NR12 RPS29P15-201ENST00000458329 171 ntBASIC4.91□□□□□ -1.62
PDLIM7Q9NR12 RNU6-333P-201ENST00000459117 107 ntBASIC4.91□□□□□ -1.62
PDLIM7Q9NR12 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.91□□□□□ -1.62
PDLIM7Q9NR12 VN1R105P-201ENST00000486595 910 ntBASIC4.91□□□□□ -1.62
PDLIM7Q9NR12 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.91□□□□□ -1.62
PDLIM7Q9NR12 RN7SL691P-201ENST00000494487 301 ntBASIC4.91□□□□□ -1.62
PDLIM7Q9NR12 AC146944.2-203ENST00000502493 354 ntBASIC4.91□□□□□ -1.62
PDLIM7Q9NR12 AC139495.1-202ENST00000513164 354 ntBASIC4.91□□□□□ -1.62
PDLIM7Q9NR12 RN7SKP219-201ENST00000516825 296 ntBASIC4.91□□□□□ -1.62
PDLIM7Q9NR12 RN7SKP277-201ENST00000516895 283 ntBASIC4.91□□□□□ -1.62
PDLIM7Q9NR12 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC4.91□□□□□ -1.62
PDLIM7Q9NR12 AL352979.3-201ENST00000553515 247 ntBASIC4.91□□□□□ -1.62
PDLIM7Q9NR12 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.91□□□□□ -1.62
PDLIM7Q9NR12 POLR3GP2-201ENST00000588366 668 ntBASIC4.91□□□□□ -1.62
PDLIM7Q9NR12 AP001330.4-201ENST00000604350 154 ntBASIC4.91□□□□□ -1.62
PDLIM7Q9NR12 AC010201.1-201ENST00000605051 540 ntBASIC4.91□□□□□ -1.62
PDLIM7Q9NR12 AL022345.1-201ENST00000607292 135 ntBASIC4.91□□□□□ -1.62
PDLIM7Q9NR12 AC103710.2-201ENST00000609912 942 ntBASIC4.91□□□□□ -1.62
PDLIM7Q9NR12 AC245517.5-201ENST00000611529 162 ntBASIC4.91□□□□□ -1.62
PDLIM7Q9NR12 uc_338.15-201ENST00000615470 191 ntBASIC4.91□□□□□ -1.62
PDLIM7Q9NR12 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC4.91□□□□□ -1.62
PDLIM7Q9NR12 AC039056.2-201ENST00000622261 511 ntBASIC4.91□□□□□ -1.62
PDLIM7Q9NR12 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
PDLIM7Q9NR12 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
PDLIM7Q9NR12 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.91□□□□□ -1.62
PDLIM7Q9NR12 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PDLIM7Q9NR12 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.9□□□□□ -1.62
PDLIM7Q9NR12 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
PDLIM7Q9NR12 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
PDLIM7Q9NR12 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.62
PDLIM7Q9NR12 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.9□□□□□ -1.62
PDLIM7Q9NR12 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms