Protein–RNA interactions for Protein: Q9BRK5

SDF4, 45 kDa calcium-binding protein, humanhuman

Predictions only

Length 362 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4Q9BRK5 RNU6-637P-201ENST00000384050 107 ntBASIC3.79□□□□□ -1.8
SDF4Q9BRK5 RNU6-114P-201ENST00000384704 105 ntBASIC3.79□□□□□ -1.8
SDF4Q9BRK5 U3.20-201ENST00000390909 217 ntBASIC3.79□□□□□ -1.8
SDF4Q9BRK5 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SDF4Q9BRK5 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC3.79□□□□□ -1.8
SDF4Q9BRK5 ARF4P2-201ENST00000430209 526 ntBASIC3.79□□□□□ -1.8
SDF4Q9BRK5 SNRPEP4-201ENST00000435815 279 ntBASIC3.79□□□□□ -1.8
SDF4Q9BRK5 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.79□□□□□ -1.8
SDF4Q9BRK5 AL592447.1-201ENST00000447592 540 ntBASIC3.79□□□□□ -1.8
SDF4Q9BRK5 AC125238.1-201ENST00000448842 249 ntBASIC3.79□□□□□ -1.8
SDF4Q9BRK5 AC012181.1-201ENST00000479895 423 ntBASIC3.79□□□□□ -1.8
SDF4Q9BRK5 RPL21P13-201ENST00000488305 481 ntBASIC3.79□□□□□ -1.8
SDF4Q9BRK5 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SDF4Q9BRK5 AL359273.1-201ENST00000510918 627 ntBASIC3.79□□□□□ -1.8
SDF4Q9BRK5 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.79□□□□□ -1.8
SDF4Q9BRK5 MTND5P4-201ENST00000514978 288 ntBASIC3.79□□□□□ -1.8
SDF4Q9BRK5 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.79□□□□□ -1.8
SDF4Q9BRK5 NAP1L1P1-201ENST00000524793 1063 ntBASIC3.79□□□□□ -1.8
SDF4Q9BRK5 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SDF4Q9BRK5 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.79□□□□□ -1.8
SDF4Q9BRK5 AC125611.2-201ENST00000551907 647 ntBASIC3.79□□□□□ -1.8
SDF4Q9BRK5 AC009094.1-201ENST00000564443 426 ntBASIC3.79□□□□□ -1.8
SDF4Q9BRK5 ISCA1P3-201ENST00000577104 373 ntBASIC3.79□□□□□ -1.8
SDF4Q9BRK5 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.79□□□□□ -1.8
SDF4Q9BRK5 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.79□□□□□ -1.8
SDF4Q9BRK5 AL162713.1-201ENST00000604480 262 ntBASIC3.79□□□□□ -1.8
SDF4Q9BRK5 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC3.79□□□□□ -1.8
SDF4Q9BRK5 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC3.79□□□□□ -1.8
SDF4Q9BRK5 AC073476.4-201ENST00000628409 72 ntBASIC3.79□□□□□ -1.8
SDF4Q9BRK5 CR383658.2-201ENST00000547576 1525 ntBASIC3.79□□□□□ -1.8
SDF4Q9BRK5 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.78□□□□□ -1.8
SDF4Q9BRK5 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SDF4Q9BRK5 AC004972.1-201ENST00000623934 2209 ntBASIC3.78□□□□□ -1.8
SDF4Q9BRK5 AC007256.1-201ENST00000392253 2765 ntBASIC3.78□□□□□ -1.8
SDF4Q9BRK5 AC009902.3-201ENST00000606235 2172 ntBASIC3.78□□□□□ -1.8
SDF4Q9BRK5 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
SDF4Q9BRK5 MIR1290-201ENST00000408735 78 ntBASIC3.78□□□□□ -1.8
SDF4Q9BRK5 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SDF4Q9BRK5 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
SDF4Q9BRK5 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.78□□□□□ -1.8
SDF4Q9BRK5 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.78□□□□□ -1.8
SDF4Q9BRK5 AC233728.2-201ENST00000425348 757 ntBASIC3.78□□□□□ -1.8
SDF4Q9BRK5 HMGN2P20-201ENST00000437531 273 ntBASIC3.78□□□□□ -1.8
SDF4Q9BRK5 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC3.78□□□□□ -1.8
SDF4Q9BRK5 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC3.78□□□□□ -1.8
SDF4Q9BRK5 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC3.78□□□□□ -1.8
SDF4Q9BRK5 AC021146.5-201ENST00000503544 545 ntBASIC3.78□□□□□ -1.8
SDF4Q9BRK5 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.78□□□□□ -1.8
SDF4Q9BRK5 AC022690.1-201ENST00000526681 550 ntBASIC3.78□□□□□ -1.8
SDF4Q9BRK5 HIGD1AP10-201ENST00000527837 282 ntBASIC3.78□□□□□ -1.8
SDF4Q9BRK5 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
SDF4Q9BRK5 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.78□□□□□ -1.8
SDF4Q9BRK5 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.78□□□□□ -1.8
SDF4Q9BRK5 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.78□□□□□ -1.8
SDF4Q9BRK5 AC015917.1-201ENST00000579654 510 ntBASIC3.78□□□□□ -1.8
SDF4Q9BRK5 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC3.78□□□□□ -1.8
SDF4Q9BRK5 VN1R90P-201ENST00000595717 726 ntBASIC3.78□□□□□ -1.8
SDF4Q9BRK5 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.78□□□□□ -1.8
SDF4Q9BRK5 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.78□□□□□ -1.8
SDF4Q9BRK5 AC018714.1-201ENST00000605028 208 ntBASIC3.78□□□□□ -1.8
SDF4Q9BRK5 AC097468.3-201ENST00000607956 456 ntBASIC3.78□□□□□ -1.8
SDF4Q9BRK5 AC009570.1-201ENST00000609599 745 ntBASIC3.78□□□□□ -1.8
SDF4Q9BRK5 AL442067.2-201ENST00000614033 363 ntBASIC3.78□□□□□ -1.8
SDF4Q9BRK5 AL356321.1-201ENST00000621360 228 ntBASIC3.78□□□□□ -1.8
SDF4Q9BRK5 AC079597.1-201ENST00000624306 508 ntBASIC3.78□□□□□ -1.8
SDF4Q9BRK5 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.78□□□□□ -1.8
SDF4Q9BRK5 PCMTD1P7-201ENST00000634506 357 ntBASIC3.78□□□□□ -1.8
SDF4Q9BRK5 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SDF4Q9BRK5 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
SDF4Q9BRK5 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
SDF4Q9BRK5 NF1-214ENST00000490416 1329 ntTSL 3 BASIC3.77□□□□□ -1.81
SDF4Q9BRK5 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.77□□□□□ -1.81
SDF4Q9BRK5 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
SDF4Q9BRK5 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
SDF4Q9BRK5 Y_RNA.18-201ENST00000362461 102 ntBASIC3.77□□□□□ -1.81
SDF4Q9BRK5 RNU5E-8P-201ENST00000363502 116 ntBASIC3.77□□□□□ -1.81
SDF4Q9BRK5 SNORA38.1-201ENST00000364172 131 ntBASIC3.77□□□□□ -1.81
SDF4Q9BRK5 RNU6-853P-201ENST00000364306 107 ntBASIC3.77□□□□□ -1.81
SDF4Q9BRK5 Y_RNA.302-201ENST00000364997 102 ntBASIC3.77□□□□□ -1.81
SDF4Q9BRK5 RNU6-253P-201ENST00000384730 105 ntBASIC3.77□□□□□ -1.81
SDF4Q9BRK5 MIR491-201ENST00000384877 84 ntBASIC3.77□□□□□ -1.81
SDF4Q9BRK5 MIR493-201ENST00000385254 89 ntBASIC3.77□□□□□ -1.81
SDF4Q9BRK5 MIR591-201ENST00000385290 95 ntBASIC3.77□□□□□ -1.81
SDF4Q9BRK5 AC109780.2-201ENST00000413467 845 ntBASIC3.77□□□□□ -1.81
SDF4Q9BRK5 AC110794.1-201ENST00000505816 425 ntBASIC3.77□□□□□ -1.81
SDF4Q9BRK5 LTV1P1-201ENST00000510683 1237 ntBASIC3.77□□□□□ -1.81
SDF4Q9BRK5 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.77□□□□□ -1.81
SDF4Q9BRK5 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.77□□□□□ -1.81
SDF4Q9BRK5 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.77□□□□□ -1.81
SDF4Q9BRK5 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC3.77□□□□□ -1.81
SDF4Q9BRK5 ERHP1-201ENST00000523006 310 ntBASIC3.77□□□□□ -1.81
SDF4Q9BRK5 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.77□□□□□ -1.81
SDF4Q9BRK5 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.77□□□□□ -1.81
SDF4Q9BRK5 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SDF4Q9BRK5 ELOCP32-201ENST00000548625 324 ntBASIC3.77□□□□□ -1.81
SDF4Q9BRK5 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.77□□□□□ -1.81
SDF4Q9BRK5 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.77□□□□□ -1.81
SDF4Q9BRK5 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.77□□□□□ -1.81
SDF4Q9BRK5 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.77□□□□□ -1.81
SDF4Q9BRK5 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms