Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 MIR433-201ENST00000384837 93 ntBASIC6.18□□□□□ -1.42
LRCH3Q96II8 HSPA8P15-201ENST00000401676 786 ntBASIC6.18□□□□□ -1.42
LRCH3Q96II8 RAB28P5-201ENST00000427490 651 ntBASIC6.18□□□□□ -1.42
LRCH3Q96II8 TEX41-205ENST00000431734 529 ntTSL 4 BASIC6.18□□□□□ -1.42
LRCH3Q96II8 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC6.18□□□□□ -1.42
LRCH3Q96II8 AC005002.2-201ENST00000438228 269 ntBASIC6.18□□□□□ -1.42
LRCH3Q96II8 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC6.18□□□□□ -1.42
LRCH3Q96II8 AC016925.1-201ENST00000458303 298 ntBASIC6.18□□□□□ -1.42
LRCH3Q96II8 RNU6-953P-201ENST00000459154 107 ntBASIC6.18□□□□□ -1.42
LRCH3Q96II8 snoU13.20-201ENST00000459180 104 ntBASIC6.18□□□□□ -1.42
LRCH3Q96II8 U8.21-201ENST00000459536 136 ntBASIC6.18□□□□□ -1.42
LRCH3Q96II8 AC091959.1-201ENST00000495857 238 ntBASIC6.18□□□□□ -1.42
LRCH3Q96II8 SNRPGP16-201ENST00000533275 226 ntBASIC6.18□□□□□ -1.42
LRCH3Q96II8 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC6.18□□□□□ -1.42
LRCH3Q96II8 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.18□□□□□ -1.42
LRCH3Q96II8 RPL23AP87-202ENST00000573039 466 ntBASIC6.18□□□□□ -1.42
LRCH3Q96II8 MIR548AC-201ENST00000585049 88 ntBASIC6.18□□□□□ -1.42
LRCH3Q96II8 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
LRCH3Q96II8 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
LRCH3Q96II8 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.18□□□□□ -1.42
LRCH3Q96II8 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
LRCH3Q96II8 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.18□□□□□ -1.42
LRCH3Q96II8 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
LRCH3Q96II8 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
LRCH3Q96II8 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
LRCH3Q96II8 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.17□□□□□ -1.42
LRCH3Q96II8 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
LRCH3Q96II8 AC010332.2-201ENST00000613083 1904 ntBASIC6.17□□□□□ -1.42
LRCH3Q96II8 AP001541.1-201ENST00000623322 1904 ntBASIC6.17□□□□□ -1.42
LRCH3Q96II8 AC009229.4-201ENST00000623854 1947 ntBASIC6.17□□□□□ -1.42
LRCH3Q96II8 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.17□□□□□ -1.42
LRCH3Q96II8 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
LRCH3Q96II8 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.17□□□□□ -1.42
LRCH3Q96II8 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
LRCH3Q96II8 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
LRCH3Q96II8 SNORA40-201ENST00000388090 126 ntBASIC6.17□□□□□ -1.42
LRCH3Q96II8 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
LRCH3Q96II8 RNU6-817P-201ENST00000391083 104 ntBASIC6.17□□□□□ -1.42
LRCH3Q96II8 AL353621.1-201ENST00000418219 243 ntBASIC6.17□□□□□ -1.42
LRCH3Q96II8 OOSP1P1-201ENST00000423265 274 ntBASIC6.17□□□□□ -1.42
LRCH3Q96II8 AC034236.1-201ENST00000469891 373 ntBASIC6.17□□□□□ -1.42
LRCH3Q96II8 ANXA2P1-201ENST00000505539 926 ntBASIC6.17□□□□□ -1.42
LRCH3Q96II8 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC6.17□□□□□ -1.42
LRCH3Q96II8 AC074255.1-201ENST00000511259 501 ntBASIC6.17□□□□□ -1.42
LRCH3Q96II8 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.17□□□□□ -1.42
LRCH3Q96II8 Y_RNA.706-201ENST00000516933 99 ntBASIC6.17□□□□□ -1.42
LRCH3Q96II8 RNU6-844P-201ENST00000517175 102 ntBASIC6.17□□□□□ -1.42
LRCH3Q96II8 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC6.17□□□□□ -1.42
LRCH3Q96II8 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC6.17□□□□□ -1.42
LRCH3Q96II8 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC6.17□□□□□ -1.42
LRCH3Q96II8 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
LRCH3Q96II8 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC6.17□□□□□ -1.42
LRCH3Q96II8 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.17□□□□□ -1.42
LRCH3Q96II8 Z99571.1-201ENST00000636677 394 ntBASIC6.17□□□□□ -1.42
LRCH3Q96II8 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.17□□□□□ -1.42
LRCH3Q96II8 AC116158.1-201ENST00000560231 2129 ntBASIC6.17□□□□□ -1.42
LRCH3Q96II8 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
LRCH3Q96II8 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
LRCH3Q96II8 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
LRCH3Q96II8 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
LRCH3Q96II8 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC6.17□□□□□ -1.42
LRCH3Q96II8 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
LRCH3Q96II8 AC110774.1-201ENST00000623567 2018 ntBASIC6.16□□□□□ -1.42
LRCH3Q96II8 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
LRCH3Q96II8 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
LRCH3Q96II8 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
LRCH3Q96II8 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
LRCH3Q96II8 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC6.16□□□□□ -1.42
LRCH3Q96II8 AC007685.1-201ENST00000329806 452 ntBASIC6.16□□□□□ -1.42
LRCH3Q96II8 RNU6-1301P-201ENST00000362724 104 ntBASIC6.16□□□□□ -1.42
LRCH3Q96II8 RNVU1-3-201ENST00000364313 161 ntBASIC6.16□□□□□ -1.42
LRCH3Q96II8 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
LRCH3Q96II8 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
LRCH3Q96II8 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.16□□□□□ -1.42
LRCH3Q96II8 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC6.16□□□□□ -1.42
LRCH3Q96II8 AP000936.3-201ENST00000438127 255 ntBASIC6.16□□□□□ -1.42
LRCH3Q96II8 AC007395.1-201ENST00000451333 677 ntBASIC6.16□□□□□ -1.42
LRCH3Q96II8 AL137159.1-201ENST00000452808 512 ntBASIC6.16□□□□□ -1.42
LRCH3Q96II8 AC234775.1-201ENST00000454247 670 ntBASIC6.16□□□□□ -1.42
LRCH3Q96II8 RPS23P7-201ENST00000466210 444 ntBASIC6.16□□□□□ -1.42
LRCH3Q96II8 RPL23AP2-201ENST00000471227 466 ntBASIC6.16□□□□□ -1.42
LRCH3Q96II8 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC6.16□□□□□ -1.42
LRCH3Q96II8 CYCTP-201ENST00000504253 315 ntBASIC6.16□□□□□ -1.42
LRCH3Q96II8 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC6.16□□□□□ -1.42
LRCH3Q96II8 AC136624.4-201ENST00000573044 370 ntBASIC6.16□□□□□ -1.42
LRCH3Q96II8 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC6.16□□□□□ -1.42
LRCH3Q96II8 ZNF826P-207ENST00000622273 1910 ntBASIC6.16□□□□□ -1.42
LRCH3Q96II8 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
LRCH3Q96II8 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
LRCH3Q96II8 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
LRCH3Q96II8 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
LRCH3Q96II8 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
LRCH3Q96II8 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
LRCH3Q96II8 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
LRCH3Q96II8 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
LRCH3Q96II8 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
LRCH3Q96II8 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
LRCH3Q96II8 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
LRCH3Q96II8 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
LRCH3Q96II8 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms