Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CFAP43Q8NDM7 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC2.52□□□□□ -2.01
CFAP43Q8NDM7 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC2.52□□□□□ -2.01
CFAP43Q8NDM7 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC2.52□□□□□ -2.01
CFAP43Q8NDM7 CD24P2-201ENST00000565486 219 ntBASIC2.52□□□□□ -2.01
CFAP43Q8NDM7 AC024614.2-201ENST00000577584 372 ntBASIC2.52□□□□□ -2.01
CFAP43Q8NDM7 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2.52□□□□□ -2.01
CFAP43Q8NDM7 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.52□□□□□ -2.01
CFAP43Q8NDM7 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CFAP43Q8NDM7 RNU6-60P-201ENST00000364792 103 ntBASIC2.51□□□□□ -2.01
CFAP43Q8NDM7 RNU6-174P-201ENST00000410406 106 ntBASIC2.51□□□□□ -2.01
CFAP43Q8NDM7 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.51□□□□□ -2.01
CFAP43Q8NDM7 CALM1P2-201ENST00000452941 448 ntBASIC2.51□□□□□ -2.01
CFAP43Q8NDM7 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.51□□□□□ -2.01
CFAP43Q8NDM7 AC012181.1-201ENST00000479895 423 ntBASIC2.51□□□□□ -2.01
CFAP43Q8NDM7 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC2.51□□□□□ -2.01
CFAP43Q8NDM7 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC2.51□□□□□ -2.01
CFAP43Q8NDM7 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC2.51□□□□□ -2.01
CFAP43Q8NDM7 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CFAP43Q8NDM7 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.51□□□□□ -2.01
CFAP43Q8NDM7 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
CFAP43Q8NDM7 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CFAP43Q8NDM7 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CFAP43Q8NDM7 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
CFAP43Q8NDM7 AL136133.1-201ENST00000413694 376 ntBASIC2.5□□□□□ -2.01
CFAP43Q8NDM7 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.5□□□□□ -2.01
CFAP43Q8NDM7 MTND4LP12-201ENST00000448237 295 ntBASIC2.5□□□□□ -2.01
CFAP43Q8NDM7 Z99714.1-201ENST00000450463 807 ntBASIC2.5□□□□□ -2.01
CFAP43Q8NDM7 AC243772.1-201ENST00000451620 410 ntBASIC2.5□□□□□ -2.01
CFAP43Q8NDM7 AC239798.3-201ENST00000454459 408 ntBASIC2.5□□□□□ -2.01
CFAP43Q8NDM7 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC2.5□□□□□ -2.01
CFAP43Q8NDM7 RPS29P20-201ENST00000489592 171 ntBASIC2.5□□□□□ -2.01
CFAP43Q8NDM7 AC005156.1-201ENST00000613371 573 ntBASIC2.5□□□□□ -2.01
CFAP43Q8NDM7 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CFAP43Q8NDM7 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.5□□□□□ -2.01
CFAP43Q8NDM7 MCTS2P-201ENST00000394552 546 ntBASIC2.5□□□□□ -2.01
CFAP43Q8NDM7 SSXP9-201ENST00000417503 292 ntBASIC2.5□□□□□ -2.01
CFAP43Q8NDM7 AC106901.1-201ENST00000425086 698 ntBASIC2.5□□□□□ -2.01
CFAP43Q8NDM7 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.5□□□□□ -2.01
CFAP43Q8NDM7 AP001804.3-201ENST00000525146 880 ntBASIC2.5□□□□□ -2.01
CFAP43Q8NDM7 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC2.5□□□□□ -2.01
CFAP43Q8NDM7 SNORD53B-201ENST00000577887 78 ntBASIC2.5□□□□□ -2.01
CFAP43Q8NDM7 AC105429.2-201ENST00000610567 517 ntBASIC2.5□□□□□ -2.01
CFAP43Q8NDM7 AL158801.5-201ENST00000623123 465 ntBASIC2.5□□□□□ -2.01
CFAP43Q8NDM7 MIR4278-201ENST00000636094 69 ntBASIC2.5□□□□□ -2.01
CFAP43Q8NDM7 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
CFAP43Q8NDM7 AC244505.5-201ENST00000443639 207 ntBASIC2.49□□□□□ -2.01
CFAP43Q8NDM7 AC090515.1-201ENST00000465295 476 ntBASIC2.49□□□□□ -2.01
CFAP43Q8NDM7 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC2.49□□□□□ -2.01
CFAP43Q8NDM7 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.49□□□□□ -2.01
CFAP43Q8NDM7 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC2.49□□□□□ -2.01
CFAP43Q8NDM7 AL159169.2-201ENST00000610061 1269 ntBASIC2.49□□□□□ -2.01
CFAP43Q8NDM7 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
CFAP43Q8NDM7 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC2.49□□□□□ -2.01
CFAP43Q8NDM7 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CFAP43Q8NDM7 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.48□□□□□ -2.01
CFAP43Q8NDM7 RNA5SP167-201ENST00000365461 116 ntBASIC2.48□□□□□ -2.01
CFAP43Q8NDM7 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.48□□□□□ -2.01
CFAP43Q8NDM7 SUMO2P12-201ENST00000405924 140 ntBASIC2.48□□□□□ -2.01
CFAP43Q8NDM7 RNU2-37P-201ENST00000410695 177 ntBASIC2.48□□□□□ -2.01
CFAP43Q8NDM7 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.48□□□□□ -2.01
CFAP43Q8NDM7 HMGN1P8-201ENST00000463578 288 ntBASIC2.48□□□□□ -2.01
CFAP43Q8NDM7 AC008526.1-201ENST00000509149 338 ntBASIC2.48□□□□□ -2.01
CFAP43Q8NDM7 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.48□□□□□ -2.01
CFAP43Q8NDM7 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CFAP43Q8NDM7 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.48□□□□□ -2.01
CFAP43Q8NDM7 MIR598-201ENST00000384868 97 ntBASIC2.47□□□□□ -2.01
CFAP43Q8NDM7 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
CFAP43Q8NDM7 ERHP2-201ENST00000402323 299 ntBASIC2.47□□□□□ -2.01
CFAP43Q8NDM7 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2.47□□□□□ -2.01
CFAP43Q8NDM7 TEX41-202ENST00000414256 604 ntTSL 5 BASIC2.47□□□□□ -2.01
CFAP43Q8NDM7 TRAPPC2P10-201ENST00000415662 323 ntBASIC2.47□□□□□ -2.01
CFAP43Q8NDM7 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.47□□□□□ -2.01
CFAP43Q8NDM7 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.47□□□□□ -2.01
CFAP43Q8NDM7 RNU6-1223P-201ENST00000517124 104 ntBASIC2.47□□□□□ -2.01
CFAP43Q8NDM7 AC016957.1-201ENST00000534895 309 ntBASIC2.47□□□□□ -2.01
CFAP43Q8NDM7 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.47□□□□□ -2.01
CFAP43Q8NDM7 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.47□□□□□ -2.01
CFAP43Q8NDM7 BX649567.1-201ENST00000642071 1134 ntBASIC2.47□□□□□ -2.01
CFAP43Q8NDM7 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CFAP43Q8NDM7 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.47□□□□□ -2.01
CFAP43Q8NDM7 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
CFAP43Q8NDM7 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
CFAP43Q8NDM7 KATNBL1P3-201ENST00000443475 909 ntBASIC2.47□□□□□ -2.01
CFAP43Q8NDM7 RPL7P31-201ENST00000450192 724 ntBASIC2.47□□□□□ -2.01
CFAP43Q8NDM7 RPS15AP36-201ENST00000492022 382 ntBASIC2.47□□□□□ -2.01
CFAP43Q8NDM7 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC2.47□□□□□ -2.01
CFAP43Q8NDM7 AC015720.1-201ENST00000565251 277 ntBASIC2.47□□□□□ -2.01
CFAP43Q8NDM7 AC013444.2-201ENST00000603317 787 ntBASIC2.47□□□□□ -2.01
CFAP43Q8NDM7 AC136443.5-201ENST00000603741 370 ntBASIC2.47□□□□□ -2.01
CFAP43Q8NDM7 OR4G11P-202ENST00000642116 1414 ntBASIC2.47□□□□□ -2.01
CFAP43Q8NDM7 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
CFAP43Q8NDM7 MIR96-201ENST00000362288 78 ntBASIC2.46□□□□□ -2.02
CFAP43Q8NDM7 MIR124-3-201ENST00000384866 87 ntBASIC2.46□□□□□ -2.02
CFAP43Q8NDM7 AC073264.1-201ENST00000411508 416 ntBASIC2.46□□□□□ -2.02
CFAP43Q8NDM7 RLIMP2-201ENST00000427891 1563 ntBASIC2.46□□□□□ -2.02
CFAP43Q8NDM7 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.46□□□□□ -2.02
CFAP43Q8NDM7 HMGN1P7-201ENST00000491722 313 ntBASIC2.46□□□□□ -2.02
CFAP43Q8NDM7 AC084851.1-201ENST00000529105 249 ntBASIC2.46□□□□□ -2.02
CFAP43Q8NDM7 OR4K8P-201ENST00000578842 1048 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms