Protein–RNA interactions for Protein: Q8NCR9

CLRN3, Clarin-3, humanhuman

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3Q8NCR9 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.05□□□□□ -1.76
CLRN3Q8NCR9 AL139148.1-201ENST00000427122 680 ntBASIC4.05□□□□□ -1.76
CLRN3Q8NCR9 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.05□□□□□ -1.76
CLRN3Q8NCR9 AC073063.1-201ENST00000434352 607 ntBASIC4.05□□□□□ -1.76
CLRN3Q8NCR9 NDUFB4P6-201ENST00000436819 366 ntBASIC4.05□□□□□ -1.76
CLRN3Q8NCR9 HMGB3P11-201ENST00000440127 604 ntBASIC4.05□□□□□ -1.76
CLRN3Q8NCR9 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.05□□□□□ -1.76
CLRN3Q8NCR9 AL513533.1-201ENST00000453728 415 ntBASIC4.05□□□□□ -1.76
CLRN3Q8NCR9 AC005532.2-201ENST00000467154 373 ntBASIC4.05□□□□□ -1.76
CLRN3Q8NCR9 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC4.05□□□□□ -1.76
CLRN3Q8NCR9 HMGB1P30-201ENST00000492455 606 ntBASIC4.05□□□□□ -1.76
CLRN3Q8NCR9 AC146944.2-203ENST00000502493 354 ntBASIC4.05□□□□□ -1.76
CLRN3Q8NCR9 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.05□□□□□ -1.76
CLRN3Q8NCR9 NENFP3-201ENST00000503735 313 ntBASIC4.05□□□□□ -1.76
CLRN3Q8NCR9 AC139495.1-202ENST00000513164 354 ntBASIC4.05□□□□□ -1.76
CLRN3Q8NCR9 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC4.05□□□□□ -1.76
CLRN3Q8NCR9 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.05□□□□□ -1.76
CLRN3Q8NCR9 GLYCAM1-201ENST00000546596 285 ntBASIC4.05□□□□□ -1.76
CLRN3Q8NCR9 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.05□□□□□ -1.76
CLRN3Q8NCR9 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.05□□□□□ -1.76
CLRN3Q8NCR9 MIR3154-201ENST00000577829 84 ntBASIC4.05□□□□□ -1.76
CLRN3Q8NCR9 AP005403.1-201ENST00000579720 229 ntBASIC4.05□□□□□ -1.76
CLRN3Q8NCR9 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.05□□□□□ -1.76
CLRN3Q8NCR9 MIR4795-201ENST00000584182 89 ntBASIC4.05□□□□□ -1.76
CLRN3Q8NCR9 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC4.05□□□□□ -1.76
CLRN3Q8NCR9 AC104662.1-201ENST00000604448 511 ntBASIC4.05□□□□□ -1.76
CLRN3Q8NCR9 MIR6823-201ENST00000622118 61 ntBASIC4.05□□□□□ -1.76
CLRN3Q8NCR9 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.05□□□□□ -1.76
CLRN3Q8NCR9 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC4.05□□□□□ -1.76
CLRN3Q8NCR9 MIR1302-1-201ENST00000637932 143 ntBASIC4.05□□□□□ -1.76
CLRN3Q8NCR9 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
CLRN3Q8NCR9 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CLRN3Q8NCR9 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
CLRN3Q8NCR9 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CLRN3Q8NCR9 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.05□□□□□ -1.76
CLRN3Q8NCR9 LARP1BP1-201ENST00000506036 1359 ntBASIC4.04□□□□□ -1.76
CLRN3Q8NCR9 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
CLRN3Q8NCR9 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
CLRN3Q8NCR9 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CLRN3Q8NCR9 AL159987.1-201ENST00000347911 293 ntBASIC4.04□□□□□ -1.76
CLRN3Q8NCR9 RNU6-254P-201ENST00000363377 107 ntBASIC4.04□□□□□ -1.76
CLRN3Q8NCR9 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
CLRN3Q8NCR9 RNU2-37P-201ENST00000410695 177 ntBASIC4.04□□□□□ -1.76
CLRN3Q8NCR9 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC4.04□□□□□ -1.76
CLRN3Q8NCR9 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC4.04□□□□□ -1.76
CLRN3Q8NCR9 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC4.04□□□□□ -1.76
CLRN3Q8NCR9 AL158156.1-201ENST00000422509 473 ntBASIC4.04□□□□□ -1.76
CLRN3Q8NCR9 EIF4HP2-201ENST00000424380 563 ntBASIC4.04□□□□□ -1.76
CLRN3Q8NCR9 AC009238.2-201ENST00000431026 355 ntBASIC4.04□□□□□ -1.76
CLRN3Q8NCR9 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.04□□□□□ -1.76
CLRN3Q8NCR9 RPL7P28-201ENST00000437739 740 ntBASIC4.04□□□□□ -1.76
CLRN3Q8NCR9 RPL23AP89-201ENST00000439324 255 ntBASIC4.04□□□□□ -1.76
CLRN3Q8NCR9 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.04□□□□□ -1.76
CLRN3Q8NCR9 AL161636.2-201ENST00000445179 927 ntBASIC4.04□□□□□ -1.76
CLRN3Q8NCR9 HSFY6P-201ENST00000445573 403 ntBASIC4.04□□□□□ -1.76
CLRN3Q8NCR9 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC4.04□□□□□ -1.76
CLRN3Q8NCR9 AC007998.1-201ENST00000474156 672 ntBASIC4.04□□□□□ -1.76
CLRN3Q8NCR9 RPL7AP6-201ENST00000477943 801 ntBASIC4.04□□□□□ -1.76
CLRN3Q8NCR9 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.04□□□□□ -1.76
CLRN3Q8NCR9 RN7SL649P-201ENST00000496974 275 ntBASIC4.04□□□□□ -1.76
CLRN3Q8NCR9 NDUFA5P12-201ENST00000503796 343 ntBASIC4.04□□□□□ -1.76
CLRN3Q8NCR9 PPBPP1-201ENST00000510807 373 ntBASIC4.04□□□□□ -1.76
CLRN3Q8NCR9 AC008716.1-201ENST00000511084 513 ntBASIC4.04□□□□□ -1.76
CLRN3Q8NCR9 ZNF519P4-201ENST00000514008 125 ntBASIC4.04□□□□□ -1.76
CLRN3Q8NCR9 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC4.04□□□□□ -1.76
CLRN3Q8NCR9 RNU6-256P-201ENST00000516747 97 ntBASIC4.04□□□□□ -1.76
CLRN3Q8NCR9 AC069113.1-201ENST00000517763 267 ntBASIC4.04□□□□□ -1.76
CLRN3Q8NCR9 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC4.04□□□□□ -1.76
CLRN3Q8NCR9 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.04□□□□□ -1.76
CLRN3Q8NCR9 ZNF192P1-203ENST00000565888 810 ntBASIC4.04□□□□□ -1.76
CLRN3Q8NCR9 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.04□□□□□ -1.76
CLRN3Q8NCR9 RN7SL708P-201ENST00000580952 299 ntBASIC4.04□□□□□ -1.76
CLRN3Q8NCR9 RN7SL356P-201ENST00000582228 248 ntBASIC4.04□□□□□ -1.76
CLRN3Q8NCR9 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC4.04□□□□□ -1.76
CLRN3Q8NCR9 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
CLRN3Q8NCR9 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC4.04□□□□□ -1.76
CLRN3Q8NCR9 RPSAP75-201ENST00000605848 301 ntBASIC4.04□□□□□ -1.76
CLRN3Q8NCR9 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CLRN3Q8NCR9 uc_338.15-201ENST00000615470 191 ntBASIC4.04□□□□□ -1.76
CLRN3Q8NCR9 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.04□□□□□ -1.76
CLRN3Q8NCR9 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.04□□□□□ -1.76
CLRN3Q8NCR9 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CLRN3Q8NCR9 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
CLRN3Q8NCR9 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CLRN3Q8NCR9 AC016588.2-201ENST00000632484 3021 ntBASIC4.04□□□□□ -1.76
CLRN3Q8NCR9 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.04□□□□□ -1.76
CLRN3Q8NCR9 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
CLRN3Q8NCR9 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.04□□□□□ -1.76
CLRN3Q8NCR9 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CLRN3Q8NCR9 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CLRN3Q8NCR9 AC022336.2-201ENST00000568966 2538 ntBASIC4.03□□□□□ -1.76
CLRN3Q8NCR9 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.03□□□□□ -1.76
CLRN3Q8NCR9 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CLRN3Q8NCR9 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
CLRN3Q8NCR9 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CLRN3Q8NCR9 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.03□□□□□ -1.76
CLRN3Q8NCR9 RNA5SP433-201ENST00000364491 114 ntBASIC4.03□□□□□ -1.76
CLRN3Q8NCR9 Y_RNA.301-201ENST00000364990 103 ntBASIC4.03□□□□□ -1.76
CLRN3Q8NCR9 MDM4-202ENST00000367180 547 ntTSL 3 BASIC4.03□□□□□ -1.76
CLRN3Q8NCR9 MIR578-201ENST00000384828 96 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms