Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 HSPE1P8-201ENST00000406997 288 ntBASIC3.57□□□□□ -1.84
CLIP4Q8N3C7 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
CLIP4Q8N3C7 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.57□□□□□ -1.84
CLIP4Q8N3C7 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.57□□□□□ -1.84
CLIP4Q8N3C7 MTND3P17-201ENST00000416968 344 ntBASIC3.57□□□□□ -1.84
CLIP4Q8N3C7 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.57□□□□□ -1.84
CLIP4Q8N3C7 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CLIP4Q8N3C7 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.57□□□□□ -1.84
CLIP4Q8N3C7 FAR2P4-202ENST00000425399 584 ntBASIC3.57□□□□□ -1.84
CLIP4Q8N3C7 MTCO2P11-201ENST00000431069 680 ntBASIC3.57□□□□□ -1.84
CLIP4Q8N3C7 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.57□□□□□ -1.84
CLIP4Q8N3C7 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.57□□□□□ -1.84
CLIP4Q8N3C7 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.57□□□□□ -1.84
CLIP4Q8N3C7 RPL23AP33-201ENST00000442301 452 ntBASIC3.57□□□□□ -1.84
CLIP4Q8N3C7 AL590399.6-201ENST00000446396 307 ntBASIC3.57□□□□□ -1.84
CLIP4Q8N3C7 AC132479.1-201ENST00000449160 144 ntBASIC3.57□□□□□ -1.84
CLIP4Q8N3C7 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.57□□□□□ -1.84
CLIP4Q8N3C7 AL359385.1-201ENST00000456509 365 ntBASIC3.57□□□□□ -1.84
CLIP4Q8N3C7 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC3.57□□□□□ -1.84
CLIP4Q8N3C7 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.57□□□□□ -1.84
CLIP4Q8N3C7 RPL7P19-201ENST00000469948 618 ntBASIC3.57□□□□□ -1.84
CLIP4Q8N3C7 NUP58P1-201ENST00000502546 1738 ntBASIC3.57□□□□□ -1.84
CLIP4Q8N3C7 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CLIP4Q8N3C7 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.57□□□□□ -1.84
CLIP4Q8N3C7 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CLIP4Q8N3C7 NDUFB4P9-201ENST00000511646 388 ntBASIC3.57□□□□□ -1.84
CLIP4Q8N3C7 AC105914.1-201ENST00000511798 226 ntBASIC3.57□□□□□ -1.84
CLIP4Q8N3C7 AC074344.1-201ENST00000512823 224 ntBASIC3.57□□□□□ -1.84
CLIP4Q8N3C7 RNU6-445P-201ENST00000516949 107 ntBASIC3.57□□□□□ -1.84
CLIP4Q8N3C7 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CLIP4Q8N3C7 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.57□□□□□ -1.84
CLIP4Q8N3C7 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.57□□□□□ -1.84
CLIP4Q8N3C7 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.57□□□□□ -1.84
CLIP4Q8N3C7 AL121576.1-201ENST00000556055 276 ntBASIC3.57□□□□□ -1.84
CLIP4Q8N3C7 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.57□□□□□ -1.84
CLIP4Q8N3C7 HMGB1P33-201ENST00000563485 527 ntBASIC3.57□□□□□ -1.84
CLIP4Q8N3C7 MIR3118-1-201ENST00000581787 76 ntBASIC3.57□□□□□ -1.84
CLIP4Q8N3C7 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.57□□□□□ -1.84
CLIP4Q8N3C7 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.57□□□□□ -1.84
CLIP4Q8N3C7 AL009028.1-201ENST00000604895 802 ntBASIC3.57□□□□□ -1.84
CLIP4Q8N3C7 AL591034.3-201ENST00000605511 685 ntBASIC3.57□□□□□ -1.84
CLIP4Q8N3C7 AC004067.1-201ENST00000608733 700 ntBASIC3.57□□□□□ -1.84
CLIP4Q8N3C7 AL355472.4-201ENST00000610233 626 ntBASIC3.57□□□□□ -1.84
CLIP4Q8N3C7 RNVU1-4-201ENST00000612985 164 ntBASIC3.57□□□□□ -1.84
CLIP4Q8N3C7 AC002553.4-201ENST00000616896 331 ntBASIC3.57□□□□□ -1.84
CLIP4Q8N3C7 AL596245.1-201ENST00000618994 362 ntBASIC3.57□□□□□ -1.84
CLIP4Q8N3C7 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC3.57□□□□□ -1.84
CLIP4Q8N3C7 AC006065.5-201ENST00000623427 349 ntBASIC3.57□□□□□ -1.84
CLIP4Q8N3C7 AC112484.5-201ENST00000624189 228 ntBASIC3.57□□□□□ -1.84
CLIP4Q8N3C7 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.57□□□□□ -1.84
CLIP4Q8N3C7 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.57□□□□□ -1.84
CLIP4Q8N3C7 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.57□□□□□ -1.84
CLIP4Q8N3C7 AC099654.14-201ENST00000638599 341 ntBASIC3.57□□□□□ -1.84
CLIP4Q8N3C7 MIR492-201ENST00000638676 116 ntBASIC3.57□□□□□ -1.84
CLIP4Q8N3C7 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CLIP4Q8N3C7 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
CLIP4Q8N3C7 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.57□□□□□ -1.84
CLIP4Q8N3C7 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
CLIP4Q8N3C7 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.56□□□□□ -1.84
CLIP4Q8N3C7 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CLIP4Q8N3C7 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.56□□□□□ -1.84
CLIP4Q8N3C7 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CLIP4Q8N3C7 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.56□□□□□ -1.84
CLIP4Q8N3C7 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.56□□□□□ -1.84
CLIP4Q8N3C7 MTND5P33-201ENST00000571250 1450 ntBASIC3.56□□□□□ -1.84
CLIP4Q8N3C7 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.56□□□□□ -1.84
CLIP4Q8N3C7 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.56□□□□□ -1.84
CLIP4Q8N3C7 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.56□□□□□ -1.84
CLIP4Q8N3C7 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.56□□□□□ -1.84
CLIP4Q8N3C7 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.56□□□□□ -1.84
CLIP4Q8N3C7 RNA5SP258-201ENST00000362750 119 ntBASIC3.56□□□□□ -1.84
CLIP4Q8N3C7 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.56□□□□□ -1.84
CLIP4Q8N3C7 RNU6-97P-201ENST00000363387 104 ntBASIC3.56□□□□□ -1.84
CLIP4Q8N3C7 RNU6-1090P-201ENST00000364065 94 ntBASIC3.56□□□□□ -1.84
CLIP4Q8N3C7 RNU6-282P-201ENST00000365357 103 ntBASIC3.56□□□□□ -1.84
CLIP4Q8N3C7 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
CLIP4Q8N3C7 U1.1-201ENST00000384101 164 ntBASIC3.56□□□□□ -1.84
CLIP4Q8N3C7 RPS26P8-201ENST00000393490 348 ntBASIC3.56□□□□□ -1.84
CLIP4Q8N3C7 HLFP1-201ENST00000402375 499 ntBASIC3.56□□□□□ -1.84
CLIP4Q8N3C7 MTND4LP20-201ENST00000402379 270 ntBASIC3.56□□□□□ -1.84
CLIP4Q8N3C7 RPL21P65-201ENST00000406094 466 ntBASIC3.56□□□□□ -1.84
CLIP4Q8N3C7 RAP1BP3-201ENST00000407180 549 ntBASIC3.56□□□□□ -1.84
CLIP4Q8N3C7 RNU2-15P-201ENST00000410692 191 ntBASIC3.56□□□□□ -1.84
CLIP4Q8N3C7 CCDC58P2-201ENST00000417131 366 ntBASIC3.56□□□□□ -1.84
CLIP4Q8N3C7 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.56□□□□□ -1.84
CLIP4Q8N3C7 AC019097.1-201ENST00000424783 735 ntBASIC3.56□□□□□ -1.84
CLIP4Q8N3C7 AC133104.1-201ENST00000429100 218 ntBASIC3.56□□□□□ -1.84
CLIP4Q8N3C7 CKS1BP5-201ENST00000434172 273 ntBASIC3.56□□□□□ -1.84
CLIP4Q8N3C7 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.56□□□□□ -1.84
CLIP4Q8N3C7 HMGB1P31-201ENST00000437242 427 ntBASIC3.56□□□□□ -1.84
CLIP4Q8N3C7 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.56□□□□□ -1.84
CLIP4Q8N3C7 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.56□□□□□ -1.84
CLIP4Q8N3C7 RN7SL330P-201ENST00000469709 307 ntBASIC3.56□□□□□ -1.84
CLIP4Q8N3C7 AC023598.1-201ENST00000472521 361 ntBASIC3.56□□□□□ -1.84
CLIP4Q8N3C7 TRBV12-2-201ENST00000489763 344 ntBASIC3.56□□□□□ -1.84
CLIP4Q8N3C7 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.56□□□□□ -1.84
CLIP4Q8N3C7 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.56□□□□□ -1.84
CLIP4Q8N3C7 AC008549.1-201ENST00000512900 643 ntBASIC3.56□□□□□ -1.84
CLIP4Q8N3C7 NPM1P41-201ENST00000512920 831 ntBASIC3.56□□□□□ -1.84
CLIP4Q8N3C7 Vault.3-201ENST00000516676 95 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms