Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.48□□□□□ -1.85
SHFQ7M4L6 AL136380.1-201ENST00000447970 162 ntBASIC3.48□□□□□ -1.85
SHFQ7M4L6 NPM1P49-201ENST00000448027 714 ntBASIC3.48□□□□□ -1.85
SHFQ7M4L6 USP9YP32-201ENST00000452432 430 ntBASIC3.48□□□□□ -1.85
SHFQ7M4L6 NANOGP10-201ENST00000453325 895 ntBASIC3.48□□□□□ -1.85
SHFQ7M4L6 AC234775.1-201ENST00000454247 670 ntBASIC3.48□□□□□ -1.85
SHFQ7M4L6 AC108059.3-201ENST00000456388 214 ntBASIC3.48□□□□□ -1.85
SHFQ7M4L6 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.48□□□□□ -1.85
SHFQ7M4L6 RPL21P11-201ENST00000461458 483 ntBASIC3.48□□□□□ -1.85
SHFQ7M4L6 MTCO2P29-201ENST00000465212 189 ntBASIC3.48□□□□□ -1.85
SHFQ7M4L6 RPS3AP14-201ENST00000483907 780 ntBASIC3.48□□□□□ -1.85
SHFQ7M4L6 AL132838.2-201ENST00000492041 314 ntBASIC3.48□□□□□ -1.85
SHFQ7M4L6 FTH1P9-201ENST00000513251 355 ntBASIC3.48□□□□□ -1.85
SHFQ7M4L6 RNA5SP208-201ENST00000516156 78 ntBASIC3.48□□□□□ -1.85
SHFQ7M4L6 Vault.1-201ENST00000516474 102 ntBASIC3.48□□□□□ -1.85
SHFQ7M4L6 RN7SKP83-201ENST00000516512 178 ntBASIC3.48□□□□□ -1.85
SHFQ7M4L6 RNU6-314P-201ENST00000516574 104 ntBASIC3.48□□□□□ -1.85
SHFQ7M4L6 RNU6-445P-201ENST00000516949 107 ntBASIC3.48□□□□□ -1.85
SHFQ7M4L6 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.48□□□□□ -1.85
SHFQ7M4L6 AP003730.1-201ENST00000524605 285 ntBASIC3.48□□□□□ -1.85
SHFQ7M4L6 AP004371.1-201ENST00000525240 214 ntBASIC3.48□□□□□ -1.85
SHFQ7M4L6 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.48□□□□□ -1.85
SHFQ7M4L6 DEFB108D-201ENST00000527787 222 ntBASIC3.48□□□□□ -1.85
SHFQ7M4L6 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.48□□□□□ -1.85
SHFQ7M4L6 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.48□□□□□ -1.85
SHFQ7M4L6 AL845331.3-202ENST00000562856 261 ntBASIC3.48□□□□□ -1.85
SHFQ7M4L6 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.48□□□□□ -1.85
SHFQ7M4L6 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.48□□□□□ -1.85
SHFQ7M4L6 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.48□□□□□ -1.85
SHFQ7M4L6 SNRPGP15-201ENST00000600149 222 ntBASIC3.48□□□□□ -1.85
SHFQ7M4L6 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.48□□□□□ -1.85
SHFQ7M4L6 AP000860.1-201ENST00000605250 559 ntBASIC3.48□□□□□ -1.85
SHFQ7M4L6 AC092954.2-201ENST00000609103 430 ntBASIC3.48□□□□□ -1.85
SHFQ7M4L6 AC068944.2-201ENST00000610373 403 ntBASIC3.48□□□□□ -1.85
SHFQ7M4L6 U6atac.1-201ENST00000616025 117 ntBASIC3.48□□□□□ -1.85
SHFQ7M4L6 AC006338.1-201ENST00000618453 749 ntBASIC3.48□□□□□ -1.85
SHFQ7M4L6 AC073534.2-201ENST00000620377 381 ntBASIC3.48□□□□□ -1.85
SHFQ7M4L6 AC092628.2-201ENST00000622492 339 ntBASIC3.48□□□□□ -1.85
SHFQ7M4L6 CR381653.2-201ENST00000624041 768 ntBASIC3.48□□□□□ -1.85
SHFQ7M4L6 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
SHFQ7M4L6 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SHFQ7M4L6 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.47□□□□□ -1.85
SHFQ7M4L6 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.47□□□□□ -1.85
SHFQ7M4L6 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SHFQ7M4L6 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
SHFQ7M4L6 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SHFQ7M4L6 RNU6-169P-201ENST00000365336 107 ntBASIC3.47□□□□□ -1.85
SHFQ7M4L6 RNU6-432P-201ENST00000384196 109 ntBASIC3.47□□□□□ -1.85
SHFQ7M4L6 RNU6-754P-201ENST00000391166 107 ntBASIC3.47□□□□□ -1.85
SHFQ7M4L6 CALM2P3-201ENST00000400429 449 ntBASIC3.47□□□□□ -1.85
SHFQ7M4L6 RNU4-55P-201ENST00000410731 137 ntBASIC3.47□□□□□ -1.85
SHFQ7M4L6 AC016397.1-201ENST00000412463 242 ntBASIC3.47□□□□□ -1.85
SHFQ7M4L6 ELOCP4-201ENST00000420090 333 ntBASIC3.47□□□□□ -1.85
SHFQ7M4L6 EIF1P1-201ENST00000421436 341 ntBASIC3.47□□□□□ -1.85
SHFQ7M4L6 AC069157.1-201ENST00000421749 137 ntBASIC3.47□□□□□ -1.85
SHFQ7M4L6 RPL21P109-201ENST00000422213 475 ntBASIC3.47□□□□□ -1.85
SHFQ7M4L6 AC093156.1-201ENST00000440382 670 ntBASIC3.47□□□□□ -1.85
SHFQ7M4L6 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.47□□□□□ -1.85
SHFQ7M4L6 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.47□□□□□ -1.85
SHFQ7M4L6 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC3.47□□□□□ -1.85
SHFQ7M4L6 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.47□□□□□ -1.85
SHFQ7M4L6 HMGB3P8-201ENST00000449709 577 ntBASIC3.47□□□□□ -1.85
SHFQ7M4L6 PSPHP1-201ENST00000450062 261 ntBASIC3.47□□□□□ -1.85
SHFQ7M4L6 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.47□□□□□ -1.85
SHFQ7M4L6 RPS29P33-201ENST00000456717 146 ntBASIC3.47□□□□□ -1.85
SHFQ7M4L6 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.47□□□□□ -1.85
SHFQ7M4L6 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.47□□□□□ -1.85
SHFQ7M4L6 AC004801.2-202ENST00000463559 283 ntBASIC3.47□□□□□ -1.85
SHFQ7M4L6 RPL23AP14-201ENST00000468281 468 ntBASIC3.47□□□□□ -1.85
SHFQ7M4L6 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.47□□□□□ -1.85
SHFQ7M4L6 HMGB1P22-201ENST00000505315 124 ntBASIC3.47□□□□□ -1.85
SHFQ7M4L6 SAP18P1-201ENST00000512058 390 ntBASIC3.47□□□□□ -1.85
SHFQ7M4L6 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.47□□□□□ -1.85
SHFQ7M4L6 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SHFQ7M4L6 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.47□□□□□ -1.85
SHFQ7M4L6 ZNF519P2-201ENST00000557032 169 ntBASIC3.47□□□□□ -1.85
SHFQ7M4L6 MIR3186-201ENST00000577404 85 ntBASIC3.47□□□□□ -1.85
SHFQ7M4L6 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.47□□□□□ -1.85
SHFQ7M4L6 MIR4330-201ENST00000579077 105 ntBASIC3.47□□□□□ -1.85
SHFQ7M4L6 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.47□□□□□ -1.85
SHFQ7M4L6 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.47□□□□□ -1.85
SHFQ7M4L6 AC005255.1-201ENST00000593748 216 ntBASIC3.47□□□□□ -1.85
SHFQ7M4L6 AL391646.1-201ENST00000603860 190 ntBASIC3.47□□□□□ -1.85
SHFQ7M4L6 AC091167.4-201ENST00000605079 184 ntBASIC3.47□□□□□ -1.85
SHFQ7M4L6 AL136363.1-201ENST00000605349 337 ntBASIC3.47□□□□□ -1.85
SHFQ7M4L6 AC103710.2-201ENST00000609912 942 ntBASIC3.47□□□□□ -1.85
SHFQ7M4L6 MIR6130-201ENST00000619419 109 ntBASIC3.47□□□□□ -1.85
SHFQ7M4L6 AL136313.1-201ENST00000624804 202 ntBASIC3.47□□□□□ -1.85
SHFQ7M4L6 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.47□□□□□ -1.85
SHFQ7M4L6 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SHFQ7M4L6 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.47□□□□□ -1.85
SHFQ7M4L6 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.46□□□□□ -1.85
SHFQ7M4L6 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.46□□□□□ -1.86
SHFQ7M4L6 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
SHFQ7M4L6 AC073073.2-201ENST00000609827 2578 ntBASIC3.46□□□□□ -1.86
SHFQ7M4L6 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
SHFQ7M4L6 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SHFQ7M4L6 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SHFQ7M4L6 RNU5E-8P-201ENST00000363502 116 ntBASIC3.46□□□□□ -1.86
SHFQ7M4L6 RNA5SP235-201ENST00000365411 114 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms