Protein–RNA interactions for Protein: Q6Q0C0

TRAF7, E3 ubiquitin-protein ligase TRAF7, humanhuman

Predictions only

Length 670 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF7Q6Q0C0 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TRAF7Q6Q0C0 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TRAF7Q6Q0C0 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TRAF7Q6Q0C0 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TRAF7Q6Q0C0 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
TRAF7Q6Q0C0 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
TRAF7Q6Q0C0 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TRAF7Q6Q0C0 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TRAF7Q6Q0C0 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TRAF7Q6Q0C0 XIAPP3-201ENST00000312918 795 ntBASIC6.16□□□□□ -1.42
TRAF7Q6Q0C0 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC6.16□□□□□ -1.42
TRAF7Q6Q0C0 Y_RNA.27-201ENST00000362540 103 ntBASIC6.16□□□□□ -1.42
TRAF7Q6Q0C0 RNU4-84P-201ENST00000364200 139 ntBASIC6.16□□□□□ -1.42
TRAF7Q6Q0C0 RNU6-294P-201ENST00000364999 102 ntBASIC6.16□□□□□ -1.42
TRAF7Q6Q0C0 RNU6-214P-201ENST00000384130 107 ntBASIC6.16□□□□□ -1.42
TRAF7Q6Q0C0 AL590762.4-201ENST00000425885 253 ntBASIC6.16□□□□□ -1.42
TRAF7Q6Q0C0 AL353597.2-202ENST00000434901 373 ntBASIC6.16□□□□□ -1.42
TRAF7Q6Q0C0 RPS27AP9-201ENST00000477681 438 ntBASIC6.16□□□□□ -1.42
TRAF7Q6Q0C0 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC6.16□□□□□ -1.42
TRAF7Q6Q0C0 AC108078.2-201ENST00000510750 236 ntBASIC6.16□□□□□ -1.42
TRAF7Q6Q0C0 AC092436.3-201ENST00000511788 257 ntBASIC6.16□□□□□ -1.42
TRAF7Q6Q0C0 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC6.16□□□□□ -1.42
TRAF7Q6Q0C0 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.16□□□□□ -1.42
TRAF7Q6Q0C0 AC006363.1-201ENST00000603806 463 ntBASIC6.16□□□□□ -1.42
TRAF7Q6Q0C0 U2.17-201ENST00000611454 95 ntBASIC6.16□□□□□ -1.42
TRAF7Q6Q0C0 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
TRAF7Q6Q0C0 AC103710.2-202ENST00000641454 2853 ntBASIC6.16□□□□□ -1.42
TRAF7Q6Q0C0 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
TRAF7Q6Q0C0 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
TRAF7Q6Q0C0 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TRAF7Q6Q0C0 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TRAF7Q6Q0C0 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
TRAF7Q6Q0C0 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
TRAF7Q6Q0C0 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC6.16□□□□□ -1.42
TRAF7Q6Q0C0 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TRAF7Q6Q0C0 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
TRAF7Q6Q0C0 AC005224.3-201ENST00000584683 2140 ntBASIC6.16□□□□□ -1.42
TRAF7Q6Q0C0 AP001642.1-201ENST00000624727 2117 ntBASIC6.16□□□□□ -1.42
TRAF7Q6Q0C0 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
TRAF7Q6Q0C0 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.15□□□□□ -1.42
TRAF7Q6Q0C0 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
TRAF7Q6Q0C0 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.15□□□□□ -1.42
TRAF7Q6Q0C0 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.15□□□□□ -1.42
TRAF7Q6Q0C0 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
TRAF7Q6Q0C0 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
TRAF7Q6Q0C0 RNA5SP443-201ENST00000363083 132 ntBASIC6.15□□□□□ -1.42
TRAF7Q6Q0C0 RNU1-106P-201ENST00000384382 164 ntBASIC6.15□□□□□ -1.42
TRAF7Q6Q0C0 RNA5SP339-201ENST00000390987 122 ntBASIC6.15□□□□□ -1.42
TRAF7Q6Q0C0 RNU6-550P-201ENST00000391057 101 ntBASIC6.15□□□□□ -1.42
TRAF7Q6Q0C0 RPL21P109-201ENST00000422213 475 ntBASIC6.15□□□□□ -1.42
TRAF7Q6Q0C0 PPIAP3-201ENST00000450588 505 ntBASIC6.15□□□□□ -1.42
TRAF7Q6Q0C0 HSPE1P25-201ENST00000455484 251 ntBASIC6.15□□□□□ -1.42
TRAF7Q6Q0C0 RPL7AP6-201ENST00000477943 801 ntBASIC6.15□□□□□ -1.42
TRAF7Q6Q0C0 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC6.15□□□□□ -1.42
TRAF7Q6Q0C0 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC6.15□□□□□ -1.42
TRAF7Q6Q0C0 AC009643.1-201ENST00000532030 391 ntBASIC6.15□□□□□ -1.42
TRAF7Q6Q0C0 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC6.15□□□□□ -1.42
TRAF7Q6Q0C0 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC6.15□□□□□ -1.42
TRAF7Q6Q0C0 HMGN2P47-201ENST00000559378 272 ntBASIC6.15□□□□□ -1.42
TRAF7Q6Q0C0 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC6.15□□□□□ -1.42
TRAF7Q6Q0C0 AC007566.2-201ENST00000603642 413 ntBASIC6.15□□□□□ -1.42
TRAF7Q6Q0C0 NANOGP3-201ENST00000605855 286 ntBASIC6.15□□□□□ -1.42
TRAF7Q6Q0C0 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC6.15□□□□□ -1.42
TRAF7Q6Q0C0 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC6.15□□□□□ -1.42
TRAF7Q6Q0C0 LARS-201ENST00000274562 2213 ntTSL 2 BASIC6.15□□□□□ -1.43
TRAF7Q6Q0C0 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
TRAF7Q6Q0C0 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.43
TRAF7Q6Q0C0 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.43
TRAF7Q6Q0C0 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
TRAF7Q6Q0C0 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.15□□□□□ -1.43
TRAF7Q6Q0C0 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC6.15□□□□□ -1.43
TRAF7Q6Q0C0 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.15□□□□□ -1.43
TRAF7Q6Q0C0 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
TRAF7Q6Q0C0 AC068769.1-201ENST00000474767 2426 ntBASIC6.15□□□□□ -1.43
TRAF7Q6Q0C0 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
TRAF7Q6Q0C0 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC6.15□□□□□ -1.43
TRAF7Q6Q0C0 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
TRAF7Q6Q0C0 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
TRAF7Q6Q0C0 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
TRAF7Q6Q0C0 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
TRAF7Q6Q0C0 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.14□□□□□ -1.43
TRAF7Q6Q0C0 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
TRAF7Q6Q0C0 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
TRAF7Q6Q0C0 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.14□□□□□ -1.43
TRAF7Q6Q0C0 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
TRAF7Q6Q0C0 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
TRAF7Q6Q0C0 RNU5E-7P-201ENST00000365290 117 ntBASIC6.14□□□□□ -1.43
TRAF7Q6Q0C0 Y_RNA.542-201ENST00000384641 111 ntBASIC6.14□□□□□ -1.43
TRAF7Q6Q0C0 RNU2-50P-201ENST00000410494 143 ntBASIC6.14□□□□□ -1.43
TRAF7Q6Q0C0 RN7SKP159-201ENST00000410657 292 ntBASIC6.14□□□□□ -1.43
TRAF7Q6Q0C0 RPL31P2-201ENST00000413849 377 ntBASIC6.14□□□□□ -1.43
TRAF7Q6Q0C0 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC6.14□□□□□ -1.43
TRAF7Q6Q0C0 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.14□□□□□ -1.43
TRAF7Q6Q0C0 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
TRAF7Q6Q0C0 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC6.14□□□□□ -1.43
TRAF7Q6Q0C0 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC6.14□□□□□ -1.43
TRAF7Q6Q0C0 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC6.14□□□□□ -1.43
TRAF7Q6Q0C0 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC6.14□□□□□ -1.43
TRAF7Q6Q0C0 RNU1-88P-201ENST00000459274 128 ntBASIC6.14□□□□□ -1.43
TRAF7Q6Q0C0 RPSAP50-201ENST00000481955 852 ntBASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 148.8 ms