Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 AC104057.1-201ENST00000515547 497 ntBASIC4.64□□□□□ -1.67
KRT40Q6A162 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.64□□□□□ -1.67
KRT40Q6A162 GNRHR2P1-201ENST00000555315 631 ntBASIC4.64□□□□□ -1.67
KRT40Q6A162 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.64□□□□□ -1.67
KRT40Q6A162 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC4.64□□□□□ -1.67
KRT40Q6A162 MIR5685-201ENST00000579080 79 ntBASIC4.64□□□□□ -1.67
KRT40Q6A162 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.64□□□□□ -1.67
KRT40Q6A162 SRGNP1-201ENST00000603392 451 ntBASIC4.64□□□□□ -1.67
KRT40Q6A162 BNIP3P10-201ENST00000605360 577 ntBASIC4.64□□□□□ -1.67
KRT40Q6A162 AC128687.2-201ENST00000609657 566 ntBASIC4.64□□□□□ -1.67
KRT40Q6A162 MIR6868-201ENST00000611215 58 ntBASIC4.64□□□□□ -1.67
KRT40Q6A162 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.64□□□□□ -1.67
KRT40Q6A162 AC233309.1-201ENST00000619522 751 ntBASIC4.64□□□□□ -1.67
KRT40Q6A162 AC012314.7-201ENST00000619693 93 ntBASIC4.64□□□□□ -1.67
KRT40Q6A162 AC009318.4-201ENST00000620496 486 ntBASIC4.64□□□□□ -1.67
KRT40Q6A162 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
KRT40Q6A162 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
KRT40Q6A162 AC006026.1-201ENST00000444025 1803 ntBASIC4.64□□□□□ -1.67
KRT40Q6A162 MTND5P28-201ENST00000438005 1594 ntBASIC4.64□□□□□ -1.67
KRT40Q6A162 MTND5P17-201ENST00000418405 1603 ntBASIC4.64□□□□□ -1.67
KRT40Q6A162 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.64□□□□□ -1.67
KRT40Q6A162 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
KRT40Q6A162 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.63□□□□□ -1.67
KRT40Q6A162 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
KRT40Q6A162 FRG1BP-201ENST00000278882 761 ntBASIC4.63□□□□□ -1.67
KRT40Q6A162 AL161781.1-201ENST00000354277 403 ntBASIC4.63□□□□□ -1.67
KRT40Q6A162 RNU6-28P-201ENST00000362378 107 ntBASIC4.63□□□□□ -1.67
KRT40Q6A162 RNU6-1243P-201ENST00000364028 107 ntBASIC4.63□□□□□ -1.67
KRT40Q6A162 RNU6-878P-201ENST00000384578 110 ntBASIC4.63□□□□□ -1.67
KRT40Q6A162 Y_RNA.529-201ENST00000384586 119 ntBASIC4.63□□□□□ -1.67
KRT40Q6A162 RNU6-178P-201ENST00000384631 104 ntBASIC4.63□□□□□ -1.67
KRT40Q6A162 RNU6-1158P-201ENST00000391167 107 ntBASIC4.63□□□□□ -1.67
KRT40Q6A162 AL356421.1-201ENST00000403255 413 ntBASIC4.63□□□□□ -1.67
KRT40Q6A162 AC069218.2-201ENST00000411665 344 ntBASIC4.63□□□□□ -1.67
KRT40Q6A162 RAB9AP3-201ENST00000412737 573 ntBASIC4.63□□□□□ -1.67
KRT40Q6A162 AC108032.1-201ENST00000416706 207 ntBASIC4.63□□□□□ -1.67
KRT40Q6A162 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.63□□□□□ -1.67
KRT40Q6A162 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC4.63□□□□□ -1.67
KRT40Q6A162 AL606489.2-201ENST00000433886 234 ntBASIC4.63□□□□□ -1.67
KRT40Q6A162 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.63□□□□□ -1.67
KRT40Q6A162 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.63□□□□□ -1.67
KRT40Q6A162 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.63□□□□□ -1.67
KRT40Q6A162 RAB9AP1-201ENST00000449393 573 ntBASIC4.63□□□□□ -1.67
KRT40Q6A162 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.63□□□□□ -1.67
KRT40Q6A162 RPS11P1-201ENST00000451072 473 ntBASIC4.63□□□□□ -1.67
KRT40Q6A162 APOOP2-201ENST00000461561 539 ntBASIC4.63□□□□□ -1.67
KRT40Q6A162 PLGLA-201ENST00000465668 449 ntBASIC4.63□□□□□ -1.67
KRT40Q6A162 RN7SL271P-201ENST00000487601 295 ntBASIC4.63□□□□□ -1.67
KRT40Q6A162 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
KRT40Q6A162 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.63□□□□□ -1.67
KRT40Q6A162 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC4.63□□□□□ -1.67
KRT40Q6A162 HMGB3P26-201ENST00000560051 582 ntBASIC4.63□□□□□ -1.67
KRT40Q6A162 AC044792.1-201ENST00000593294 196 ntBASIC4.63□□□□□ -1.67
KRT40Q6A162 AP001429.1-201ENST00000602568 530 ntBASIC4.63□□□□□ -1.67
KRT40Q6A162 NRBF2P5-201ENST00000603087 788 ntBASIC4.63□□□□□ -1.67
KRT40Q6A162 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.63□□□□□ -1.67
KRT40Q6A162 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
KRT40Q6A162 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
KRT40Q6A162 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.63□□□□□ -1.67
KRT40Q6A162 AC097714.1-201ENST00000511272 1647 ntBASIC4.63□□□□□ -1.67
KRT40Q6A162 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
KRT40Q6A162 AC068254.2-201ENST00000623938 3577 ntBASIC4.63□□□□□ -1.67
KRT40Q6A162 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.62□□□□□ -1.67
KRT40Q6A162 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.62□□□□□ -1.67
KRT40Q6A162 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC4.62□□□□□ -1.67
KRT40Q6A162 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.62□□□□□ -1.67
KRT40Q6A162 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.62□□□□□ -1.67
KRT40Q6A162 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
KRT40Q6A162 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
KRT40Q6A162 RNU4-73P-201ENST00000363164 141 ntBASIC4.62□□□□□ -1.67
KRT40Q6A162 Y_RNA.234-201ENST00000364409 97 ntBASIC4.62□□□□□ -1.67
KRT40Q6A162 RNY4P16-201ENST00000364768 94 ntBASIC4.62□□□□□ -1.67
KRT40Q6A162 SNORA20.2-201ENST00000383922 131 ntBASIC4.62□□□□□ -1.67
KRT40Q6A162 RNU6-456P-201ENST00000384493 107 ntBASIC4.62□□□□□ -1.67
KRT40Q6A162 ENSAP1-201ENST00000392855 326 ntBASIC4.62□□□□□ -1.67
KRT40Q6A162 AL590704.1-201ENST00000402856 794 ntBASIC4.62□□□□□ -1.67
KRT40Q6A162 RNA5SP39-201ENST00000411245 120 ntBASIC4.62□□□□□ -1.67
KRT40Q6A162 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.62□□□□□ -1.67
KRT40Q6A162 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.62□□□□□ -1.67
KRT40Q6A162 TBCAP1-201ENST00000436520 327 ntBASIC4.62□□□□□ -1.67
KRT40Q6A162 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC4.62□□□□□ -1.67
KRT40Q6A162 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.62□□□□□ -1.67
KRT40Q6A162 SNRPGP6-201ENST00000451124 220 ntBASIC4.62□□□□□ -1.67
KRT40Q6A162 AP1S2P1-201ENST00000457344 379 ntBASIC4.62□□□□□ -1.67
KRT40Q6A162 RPS20P20-201ENST00000460498 340 ntBASIC4.62□□□□□ -1.67
KRT40Q6A162 RPS26P15-201ENST00000488067 348 ntBASIC4.62□□□□□ -1.67
KRT40Q6A162 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.62□□□□□ -1.67
KRT40Q6A162 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC4.62□□□□□ -1.67
KRT40Q6A162 SNORA74D-201ENST00000516404 141 ntBASIC4.62□□□□□ -1.67
KRT40Q6A162 AC090572.1-201ENST00000519251 160 ntBASIC4.62□□□□□ -1.67
KRT40Q6A162 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.62□□□□□ -1.67
KRT40Q6A162 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.62□□□□□ -1.67
KRT40Q6A162 AP003072.2-201ENST00000527756 676 ntBASIC4.62□□□□□ -1.67
KRT40Q6A162 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.62□□□□□ -1.67
KRT40Q6A162 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC4.62□□□□□ -1.67
KRT40Q6A162 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.62□□□□□ -1.67
KRT40Q6A162 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.62□□□□□ -1.67
KRT40Q6A162 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.62□□□□□ -1.67
KRT40Q6A162 MIR4298-201ENST00000584380 73 ntBASIC4.62□□□□□ -1.67
KRT40Q6A162 NF1P5-201ENST00000588287 448 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms