Protein–RNA interactions for Protein: Q15012

LAPTM4A, Lysosomal-associated transmembrane protein 4A, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4AQ15012 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
LAPTM4AQ15012 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
LAPTM4AQ15012 RN7SKP17-201ENST00000411242 351 ntBASIC5.61□□□□□ -1.51
LAPTM4AQ15012 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.61□□□□□ -1.51
LAPTM4AQ15012 AC013403.1-201ENST00000436954 263 ntBASIC5.61□□□□□ -1.51
LAPTM4AQ15012 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC5.61□□□□□ -1.51
LAPTM4AQ15012 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.61□□□□□ -1.51
LAPTM4AQ15012 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC5.61□□□□□ -1.51
LAPTM4AQ15012 AC022730.1-201ENST00000473114 568 ntBASIC5.61□□□□□ -1.51
LAPTM4AQ15012 RPL26P26-201ENST00000480251 434 ntBASIC5.61□□□□□ -1.51
LAPTM4AQ15012 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
LAPTM4AQ15012 SNORA40.9-201ENST00000515895 93 ntBASIC5.61□□□□□ -1.51
LAPTM4AQ15012 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC5.61□□□□□ -1.51
LAPTM4AQ15012 SOD1P3-201ENST00000518682 454 ntBASIC5.61□□□□□ -1.51
LAPTM4AQ15012 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
LAPTM4AQ15012 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
LAPTM4AQ15012 MIR212-201ENST00000586026 110 ntBASIC5.61□□□□□ -1.51
LAPTM4AQ15012 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.61□□□□□ -1.51
LAPTM4AQ15012 AC068831.7-201ENST00000616954 363 ntBASIC5.61□□□□□ -1.51
LAPTM4AQ15012 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.61□□□□□ -1.51
LAPTM4AQ15012 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
LAPTM4AQ15012 AL773545.4-201ENST00000637262 310 ntBASIC5.61□□□□□ -1.51
LAPTM4AQ15012 AL513478.4-201ENST00000641636 310 ntBASIC5.61□□□□□ -1.51
LAPTM4AQ15012 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
LAPTM4AQ15012 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
LAPTM4AQ15012 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
LAPTM4AQ15012 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
LAPTM4AQ15012 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
LAPTM4AQ15012 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.61□□□□□ -1.51
LAPTM4AQ15012 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
LAPTM4AQ15012 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
LAPTM4AQ15012 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
LAPTM4AQ15012 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.6□□□□□ -1.51
LAPTM4AQ15012 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LAPTM4AQ15012 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
LAPTM4AQ15012 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LAPTM4AQ15012 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LAPTM4AQ15012 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
LAPTM4AQ15012 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
LAPTM4AQ15012 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
LAPTM4AQ15012 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC5.6□□□□□ -1.51
LAPTM4AQ15012 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LAPTM4AQ15012 RNU6-1272P-201ENST00000362776 107 ntBASIC5.6□□□□□ -1.51
LAPTM4AQ15012 RNA5SP234-201ENST00000363916 119 ntBASIC5.6□□□□□ -1.51
LAPTM4AQ15012 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LAPTM4AQ15012 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
LAPTM4AQ15012 RN7SKP216-201ENST00000411050 312 ntBASIC5.6□□□□□ -1.51
LAPTM4AQ15012 RNU6-516P-201ENST00000411381 104 ntBASIC5.6□□□□□ -1.51
LAPTM4AQ15012 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.6□□□□□ -1.51
LAPTM4AQ15012 RPL21P50-201ENST00000417698 477 ntBASIC5.6□□□□□ -1.51
LAPTM4AQ15012 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.6□□□□□ -1.51
LAPTM4AQ15012 BX323845.3-201ENST00000428215 527 ntBASIC5.6□□□□□ -1.51
LAPTM4AQ15012 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC5.6□□□□□ -1.51
LAPTM4AQ15012 AL714022.1-201ENST00000439897 151 ntBASIC5.6□□□□□ -1.51
LAPTM4AQ15012 AL031681.1-201ENST00000443304 400 ntBASIC5.6□□□□□ -1.51
LAPTM4AQ15012 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC5.6□□□□□ -1.51
LAPTM4AQ15012 AL133351.3-201ENST00000454998 193 ntBASIC5.6□□□□□ -1.51
LAPTM4AQ15012 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.6□□□□□ -1.51
LAPTM4AQ15012 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC5.6□□□□□ -1.51
LAPTM4AQ15012 RN7SL326P-201ENST00000477493 296 ntBASIC5.6□□□□□ -1.51
LAPTM4AQ15012 RN7SL502P-201ENST00000481857 290 ntBASIC5.6□□□□□ -1.51
LAPTM4AQ15012 RPS4XP13-201ENST00000483219 789 ntBASIC5.6□□□□□ -1.51
LAPTM4AQ15012 RN7SL284P-201ENST00000498823 275 ntBASIC5.6□□□□□ -1.51
LAPTM4AQ15012 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.6□□□□□ -1.51
LAPTM4AQ15012 AC093767.1-201ENST00000504523 156 ntBASIC5.6□□□□□ -1.51
LAPTM4AQ15012 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.6□□□□□ -1.51
LAPTM4AQ15012 COX7A2P2-201ENST00000505291 250 ntBASIC5.6□□□□□ -1.51
LAPTM4AQ15012 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC5.6□□□□□ -1.51
LAPTM4AQ15012 RNA5SP206-201ENST00000516703 121 ntBASIC5.6□□□□□ -1.51
LAPTM4AQ15012 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC5.6□□□□□ -1.51
LAPTM4AQ15012 MIR6885-201ENST00000612241 66 ntBASIC5.6□□□□□ -1.51
LAPTM4AQ15012 uc_338.26-201ENST00000612659 160 ntBASIC5.6□□□□□ -1.51
LAPTM4AQ15012 AC007998.5-201ENST00000622938 237 ntBASIC5.6□□□□□ -1.51
LAPTM4AQ15012 MIR6844-201ENST00000637122 62 ntBASIC5.6□□□□□ -1.51
LAPTM4AQ15012 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
LAPTM4AQ15012 AL449283.1-201ENST00000602631 3403 ntBASIC5.6□□□□□ -1.51
LAPTM4AQ15012 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LAPTM4AQ15012 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
LAPTM4AQ15012 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LAPTM4AQ15012 AL592148.3-201ENST00000608771 2646 ntBASIC5.6□□□□□ -1.51
LAPTM4AQ15012 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LAPTM4AQ15012 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LAPTM4AQ15012 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
LAPTM4AQ15012 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LAPTM4AQ15012 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
LAPTM4AQ15012 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
LAPTM4AQ15012 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.59□□□□□ -1.51
LAPTM4AQ15012 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.59□□□□□ -1.51
LAPTM4AQ15012 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
LAPTM4AQ15012 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LAPTM4AQ15012 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
LAPTM4AQ15012 GTF2IP4-201ENST00000453092 2054 ntBASIC5.59□□□□□ -1.51
LAPTM4AQ15012 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LAPTM4AQ15012 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
LAPTM4AQ15012 Y_RNA.251-201ENST00000364551 99 ntBASIC5.59□□□□□ -1.51
LAPTM4AQ15012 MIR578-201ENST00000384828 96 ntBASIC5.59□□□□□ -1.51
LAPTM4AQ15012 SNORD94-201ENST00000386037 137 ntBASIC5.59□□□□□ -1.51
LAPTM4AQ15012 RNU11-201ENST00000387069 134 ntBASIC5.59□□□□□ -1.51
LAPTM4AQ15012 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
LAPTM4AQ15012 AL354868.1-201ENST00000417077 482 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms