Protein–RNA interactions for Protein: Q00587

CDC42EP1, Cdc42 effector protein 1, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1Q00587 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.36□□□□□ -1.71
CDC42EP1Q00587 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.36□□□□□ -1.71
CDC42EP1Q00587 AC006254.3-201ENST00000603353 884 ntBASIC4.36□□□□□ -1.71
CDC42EP1Q00587 AC025449.1-201ENST00000603896 529 ntBASIC4.36□□□□□ -1.71
CDC42EP1Q00587 AC245389.1-201ENST00000605141 529 ntBASIC4.36□□□□□ -1.71
CDC42EP1Q00587 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.36□□□□□ -1.71
CDC42EP1Q00587 AL031666.3-201ENST00000609320 1006 ntBASIC4.36□□□□□ -1.71
CDC42EP1Q00587 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CDC42EP1Q00587 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.36□□□□□ -1.71
CDC42EP1Q00587 AC006065.5-201ENST00000623427 349 ntBASIC4.36□□□□□ -1.71
CDC42EP1Q00587 AC000123.3-201ENST00000624029 4975 ntBASIC4.36□□□□□ -1.71
CDC42EP1Q00587 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
CDC42EP1Q00587 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.36□□□□□ -1.71
CDC42EP1Q00587 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CDC42EP1Q00587 MARK2P15-201ENST00000432204 2186 ntBASIC4.36□□□□□ -1.71
CDC42EP1Q00587 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CDC42EP1Q00587 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.35□□□□□ -1.71
CDC42EP1Q00587 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.35□□□□□ -1.71
CDC42EP1Q00587 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.35□□□□□ -1.71
CDC42EP1Q00587 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CDC42EP1Q00587 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.35□□□□□ -1.71
CDC42EP1Q00587 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.35□□□□□ -1.71
CDC42EP1Q00587 RNU6-1120P-201ENST00000362988 108 ntBASIC4.35□□□□□ -1.71
CDC42EP1Q00587 SNORD56.2-201ENST00000363242 71 ntBASIC4.35□□□□□ -1.71
CDC42EP1Q00587 RNA5SP399-201ENST00000364003 117 ntBASIC4.35□□□□□ -1.71
CDC42EP1Q00587 RNU6-637P-201ENST00000384050 107 ntBASIC4.35□□□□□ -1.71
CDC42EP1Q00587 PTMAP2-201ENST00000397627 327 ntBASIC4.35□□□□□ -1.71
CDC42EP1Q00587 RPS4XP8-201ENST00000402039 771 ntBASIC4.35□□□□□ -1.71
CDC42EP1Q00587 RNU2-9P-201ENST00000410194 145 ntBASIC4.35□□□□□ -1.71
CDC42EP1Q00587 AL137014.1-201ENST00000420490 1226 ntBASIC4.35□□□□□ -1.71
CDC42EP1Q00587 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.35□□□□□ -1.71
CDC42EP1Q00587 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.35□□□□□ -1.71
CDC42EP1Q00587 TBCAP1-201ENST00000436520 327 ntBASIC4.35□□□□□ -1.71
CDC42EP1Q00587 RPL35AP22-201ENST00000436855 335 ntBASIC4.35□□□□□ -1.71
CDC42EP1Q00587 BNIP3P2-201ENST00000441221 577 ntBASIC4.35□□□□□ -1.71
CDC42EP1Q00587 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC4.35□□□□□ -1.71
CDC42EP1Q00587 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.35□□□□□ -1.71
CDC42EP1Q00587 AC007967.1-201ENST00000455422 1159 ntBASIC4.35□□□□□ -1.71
CDC42EP1Q00587 AC022364.2-201ENST00000457963 554 ntBASIC4.35□□□□□ -1.71
CDC42EP1Q00587 RNU6-420P-201ENST00000458780 107 ntBASIC4.35□□□□□ -1.71
CDC42EP1Q00587 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.35□□□□□ -1.71
CDC42EP1Q00587 RPS3AP50-201ENST00000487064 803 ntBASIC4.35□□□□□ -1.71
CDC42EP1Q00587 RN7SL323P-201ENST00000494712 295 ntBASIC4.35□□□□□ -1.71
CDC42EP1Q00587 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC4.35□□□□□ -1.71
CDC42EP1Q00587 IGKV2-38-201ENST00000517443 247 ntBASIC4.35□□□□□ -1.71
CDC42EP1Q00587 AC103783.1-201ENST00000520506 373 ntBASIC4.35□□□□□ -1.71
CDC42EP1Q00587 IGLV3-26-201ENST00000520756 302 ntBASIC4.35□□□□□ -1.71
CDC42EP1Q00587 HMGN1P28-201ENST00000521340 364 ntBASIC4.35□□□□□ -1.71
CDC42EP1Q00587 OR4R1P-201ENST00000529879 463 ntBASIC4.35□□□□□ -1.71
CDC42EP1Q00587 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.35□□□□□ -1.71
CDC42EP1Q00587 AL121579.1-201ENST00000555129 305 ntBASIC4.35□□□□□ -1.71
CDC42EP1Q00587 RPL21P12-201ENST00000559810 515 ntBASIC4.35□□□□□ -1.71
CDC42EP1Q00587 AL162413.1-201ENST00000603198 110 ntBASIC4.35□□□□□ -1.71
CDC42EP1Q00587 AC012669.1-201ENST00000603209 283 ntBASIC4.35□□□□□ -1.71
CDC42EP1Q00587 AL357078.3-201ENST00000607528 618 ntBASIC4.35□□□□□ -1.71
CDC42EP1Q00587 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.35□□□□□ -1.71
CDC42EP1Q00587 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CDC42EP1Q00587 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
CDC42EP1Q00587 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.35□□□□□ -1.71
CDC42EP1Q00587 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CDC42EP1Q00587 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.35□□□□□ -1.71
CDC42EP1Q00587 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.35□□□□□ -1.71
CDC42EP1Q00587 LINC01109-201ENST00000603837 3081 ntBASIC4.35□□□□□ -1.71
CDC42EP1Q00587 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.34□□□□□ -1.71
CDC42EP1Q00587 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CDC42EP1Q00587 AC244517.1-201ENST00000606030 2086 ntBASIC4.34□□□□□ -1.71
CDC42EP1Q00587 AC083843.3-201ENST00000623679 2186 ntBASIC4.34□□□□□ -1.71
CDC42EP1Q00587 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.34□□□□□ -1.71
CDC42EP1Q00587 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.34□□□□□ -1.71
CDC42EP1Q00587 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CDC42EP1Q00587 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.34□□□□□ -1.71
CDC42EP1Q00587 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.34□□□□□ -1.71
CDC42EP1Q00587 U3.11-201ENST00000364476 212 ntBASIC4.34□□□□□ -1.71
CDC42EP1Q00587 MIR1-2-201ENST00000384961 85 ntBASIC4.34□□□□□ -1.71
CDC42EP1Q00587 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CDC42EP1Q00587 RNU6-712P-201ENST00000410558 100 ntBASIC4.34□□□□□ -1.71
CDC42EP1Q00587 SNORA57.3-201ENST00000411095 141 ntBASIC4.34□□□□□ -1.71
CDC42EP1Q00587 MRPL50P2-201ENST00000416821 482 ntBASIC4.34□□□□□ -1.71
CDC42EP1Q00587 BEND7P1-201ENST00000422058 457 ntBASIC4.34□□□□□ -1.71
CDC42EP1Q00587 HLA-N-201ENST00000437516 135 ntBASIC4.34□□□□□ -1.71
CDC42EP1Q00587 AC083863.1-201ENST00000438811 231 ntBASIC4.34□□□□□ -1.71
CDC42EP1Q00587 FDX1P2-201ENST00000450769 375 ntBASIC4.34□□□□□ -1.71
CDC42EP1Q00587 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.34□□□□□ -1.71
CDC42EP1Q00587 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.34□□□□□ -1.71
CDC42EP1Q00587 SNORA84-201ENST00000459229 133 ntBASIC4.34□□□□□ -1.71
CDC42EP1Q00587 RPL36AP51-201ENST00000487216 318 ntBASIC4.34□□□□□ -1.71
CDC42EP1Q00587 AC068305.1-201ENST00000497406 726 ntBASIC4.34□□□□□ -1.71
CDC42EP1Q00587 RNU4-60P-201ENST00000517239 135 ntBASIC4.34□□□□□ -1.71
CDC42EP1Q00587 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.34□□□□□ -1.71
CDC42EP1Q00587 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC4.34□□□□□ -1.71
CDC42EP1Q00587 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC4.34□□□□□ -1.71
CDC42EP1Q00587 AC126177.3-201ENST00000551839 688 ntBASIC4.34□□□□□ -1.71
CDC42EP1Q00587 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.34□□□□□ -1.71
CDC42EP1Q00587 AC105224.1-201ENST00000587055 421 ntBASIC4.34□□□□□ -1.71
CDC42EP1Q00587 AC008752.3-201ENST00000588113 712 ntBASIC4.34□□□□□ -1.71
CDC42EP1Q00587 GLUD1P4-201ENST00000590914 418 ntBASIC4.34□□□□□ -1.71
CDC42EP1Q00587 AL020991.1-201ENST00000612314 373 ntBASIC4.34□□□□□ -1.71
CDC42EP1Q00587 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.34□□□□□ -1.71
CDC42EP1Q00587 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CDC42EP1Q00587 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms