Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 RNU1-52P-201ENST00000384190 164 ntBASIC2.5□□□□□ -2.01
TPM4P67936 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.5□□□□□ -2.01
TPM4P67936 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.5□□□□□ -2.01
TPM4P67936 CCNB1IP1P3-201ENST00000454702 829 ntBASIC2.5□□□□□ -2.01
TPM4P67936 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC2.5□□□□□ -2.01
TPM4P67936 MTCO3P2-201ENST00000457365 171 ntBASIC2.5□□□□□ -2.01
TPM4P67936 RNU6-420P-201ENST00000458780 107 ntBASIC2.5□□□□□ -2.01
TPM4P67936 AL049714.1-201ENST00000466686 347 ntBASIC2.5□□□□□ -2.01
TPM4P67936 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
TPM4P67936 AL359273.1-201ENST00000510918 627 ntBASIC2.5□□□□□ -2.01
TPM4P67936 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.5□□□□□ -2.01
TPM4P67936 MRPS36P2-201ENST00000512569 299 ntBASIC2.5□□□□□ -2.01
TPM4P67936 AC026801.2-201ENST00000515352 425 ntBASIC2.5□□□□□ -2.01
TPM4P67936 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.5□□□□□ -2.01
TPM4P67936 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC2.5□□□□□ -2.01
TPM4P67936 MIR3921-201ENST00000577308 85 ntBASIC2.5□□□□□ -2.01
TPM4P67936 AL020997.3-201ENST00000602843 359 ntBASIC2.5□□□□□ -2.01
TPM4P67936 AC024220.1-201ENST00000603675 484 ntBASIC2.5□□□□□ -2.01
TPM4P67936 AC112503.2-201ENST00000609005 552 ntBASIC2.5□□□□□ -2.01
TPM4P67936 HMGB1P24-202ENST00000615653 685 ntBASIC2.5□□□□□ -2.01
TPM4P67936 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.5□□□□□ -2.01
TPM4P67936 AC009159.1-201ENST00000618386 642 ntBASIC2.5□□□□□ -2.01
TPM4P67936 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.5□□□□□ -2.01
TPM4P67936 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.5□□□□□ -2.01
TPM4P67936 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.5□□□□□ -2.01
TPM4P67936 MTND5P11-201ENST00000511037 1812 ntBASIC2.49□□□□□ -2.01
TPM4P67936 DEFB108F-201ENST00000344638 222 ntBASIC2.49□□□□□ -2.01
TPM4P67936 RNU6-7-201ENST00000364784 107 ntBASIC2.49□□□□□ -2.01
TPM4P67936 RNU6-8-201ENST00000365467 107 ntBASIC2.49□□□□□ -2.01
TPM4P67936 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.49□□□□□ -2.01
TPM4P67936 ARL2BPP3-201ENST00000421226 480 ntBASIC2.49□□□□□ -2.01
TPM4P67936 COTL1P1-201ENST00000422309 375 ntBASIC2.49□□□□□ -2.01
TPM4P67936 MTND4P24-201ENST00000424002 397 ntBASIC2.49□□□□□ -2.01
TPM4P67936 SRIP2-201ENST00000428470 166 ntBASIC2.49□□□□□ -2.01
TPM4P67936 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.49□□□□□ -2.01
TPM4P67936 RAC1P7-201ENST00000445367 377 ntBASIC2.49□□□□□ -2.01
TPM4P67936 COX6CP12-201ENST00000446748 202 ntBASIC2.49□□□□□ -2.01
TPM4P67936 RPS15AP27-201ENST00000449183 343 ntBASIC2.49□□□□□ -2.01
TPM4P67936 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.49□□□□□ -2.01
TPM4P67936 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.49□□□□□ -2.01
TPM4P67936 RNU7-23P-201ENST00000459465 62 ntBASIC2.49□□□□□ -2.01
TPM4P67936 MRPL42P6-201ENST00000486397 371 ntBASIC2.49□□□□□ -2.01
TPM4P67936 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
TPM4P67936 RNU6-416P-201ENST00000516265 103 ntBASIC2.49□□□□□ -2.01
TPM4P67936 RNU1-40P-201ENST00000516816 164 ntBASIC2.49□□□□□ -2.01
TPM4P67936 RNU1-97P-201ENST00000516872 164 ntBASIC2.49□□□□□ -2.01
TPM4P67936 RNU6-928P-201ENST00000516876 104 ntBASIC2.49□□□□□ -2.01
TPM4P67936 MTCYBP20-201ENST00000524239 1129 ntBASIC2.49□□□□□ -2.01
TPM4P67936 DEFB108D-201ENST00000527787 222 ntBASIC2.49□□□□□ -2.01
TPM4P67936 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.49□□□□□ -2.01
TPM4P67936 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.49□□□□□ -2.01
TPM4P67936 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC2.49□□□□□ -2.01
TPM4P67936 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.49□□□□□ -2.01
TPM4P67936 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.49□□□□□ -2.01
TPM4P67936 AC011471.1-201ENST00000585766 187 ntBASIC2.49□□□□□ -2.01
TPM4P67936 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC2.49□□□□□ -2.01
TPM4P67936 MIR6132-201ENST00000622083 109 ntBASIC2.49□□□□□ -2.01
TPM4P67936 AC004777.1-201ENST00000624317 287 ntBASIC2.49□□□□□ -2.01
TPM4P67936 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
TPM4P67936 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.49□□□□□ -2.01
TPM4P67936 GNG5P1-201ENST00000255500 204 ntBASIC2.48□□□□□ -2.01
TPM4P67936 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.48□□□□□ -2.01
TPM4P67936 SNORA67.4-201ENST00000384688 142 ntBASIC2.48□□□□□ -2.01
TPM4P67936 RNA5SP171-201ENST00000391071 115 ntBASIC2.48□□□□□ -2.01
TPM4P67936 AL024474.1-201ENST00000404655 591 ntBASIC2.48□□□□□ -2.01
TPM4P67936 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.48□□□□□ -2.01
TPM4P67936 NANOGP5-201ENST00000424456 877 ntBASIC2.48□□□□□ -2.01
TPM4P67936 RPL7P44-201ENST00000424827 742 ntBASIC2.48□□□□□ -2.01
TPM4P67936 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
TPM4P67936 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC2.48□□□□□ -2.01
TPM4P67936 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.48□□□□□ -2.01
TPM4P67936 AC011753.1-201ENST00000451001 220 ntBASIC2.48□□□□□ -2.01
TPM4P67936 Z82190.1-201ENST00000454534 490 ntBASIC2.48□□□□□ -2.01
TPM4P67936 RNU7-26P-201ENST00000458980 63 ntBASIC2.48□□□□□ -2.01
TPM4P67936 AL135752.1-201ENST00000479477 471 ntBASIC2.48□□□□□ -2.01
TPM4P67936 MTCYBP17-201ENST00000503579 789 ntBASIC2.48□□□□□ -2.01
TPM4P67936 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.48□□□□□ -2.01
TPM4P67936 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.48□□□□□ -2.01
TPM4P67936 AC025755.1-201ENST00000521306 278 ntBASIC2.48□□□□□ -2.01
TPM4P67936 OR5AK1P-201ENST00000524837 922 ntBASIC2.48□□□□□ -2.01
TPM4P67936 GTF2IP8-201ENST00000560687 584 ntBASIC2.48□□□□□ -2.01
TPM4P67936 AC095057.3-201ENST00000567102 1157 ntBASIC2.48□□□□□ -2.01
TPM4P67936 VN1R78P-201ENST00000597393 564 ntBASIC2.48□□□□□ -2.01
TPM4P67936 AC013444.2-201ENST00000603317 787 ntBASIC2.48□□□□□ -2.01
TPM4P67936 AL355802.4-201ENST00000607635 548 ntBASIC2.48□□□□□ -2.01
TPM4P67936 AC096586.1-201ENST00000610267 561 ntBASIC2.48□□□□□ -2.01
TPM4P67936 AC009831.4-201ENST00000620744 325 ntBASIC2.48□□□□□ -2.01
TPM4P67936 AL137003.2-201ENST00000606924 2538 ntBASIC2.48□□□□□ -2.01
TPM4P67936 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
TPM4P67936 AC009902.3-201ENST00000606235 2172 ntBASIC2.47□□□□□ -2.01
TPM4P67936 SNORD51.1-201ENST00000365405 77 ntBASIC2.47□□□□□ -2.01
TPM4P67936 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
TPM4P67936 RNU6-1005P-201ENST00000384519 107 ntBASIC2.47□□□□□ -2.01
TPM4P67936 OR51A3P-201ENST00000413596 924 ntBASIC2.47□□□□□ -2.01
TPM4P67936 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.47□□□□□ -2.01
TPM4P67936 HMGN2P38-201ENST00000423806 265 ntBASIC2.47□□□□□ -2.01
TPM4P67936 AC098614.2-201ENST00000426040 255 ntBASIC2.47□□□□□ -2.01
TPM4P67936 MTCO3P30-201ENST00000426425 670 ntBASIC2.47□□□□□ -2.01
TPM4P67936 RPL31P54-201ENST00000429803 370 ntBASIC2.47□□□□□ -2.01
TPM4P67936 TPTE2P1-204ENST00000435256 593 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms