Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AP000873.5-201ENST00000533906 236 ntBASIC2.56□□□□□ -2
CLDN6P56747 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC2.56□□□□□ -2
CLDN6P56747 HPRT1P3-201ENST00000539521 576 ntBASIC2.56□□□□□ -2
CLDN6P56747 CR383656.7-201ENST00000548164 174 ntBASIC2.56□□□□□ -2
CLDN6P56747 AC128657.1-201ENST00000549459 145 ntBASIC2.56□□□□□ -2
CLDN6P56747 SETP7-201ENST00000552169 453 ntBASIC2.56□□□□□ -2
CLDN6P56747 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.56□□□□□ -2
CLDN6P56747 AC044913.1-201ENST00000557200 430 ntBASIC2.56□□□□□ -2
CLDN6P56747 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC2.56□□□□□ -2
CLDN6P56747 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.56□□□□□ -2
CLDN6P56747 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.56□□□□□ -2
CLDN6P56747 AC013444.2-201ENST00000603317 787 ntBASIC2.56□□□□□ -2
CLDN6P56747 AL031176.1-201ENST00000604554 466 ntBASIC2.56□□□□□ -2
CLDN6P56747 AL133507.1-201ENST00000605269 557 ntBASIC2.56□□□□□ -2
CLDN6P56747 AL020991.1-201ENST00000612314 373 ntBASIC2.56□□□□□ -2
CLDN6P56747 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.56□□□□□ -2
CLDN6P56747 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.56□□□□□ -2
CLDN6P56747 Z99129.2-201ENST00000619967 314 ntBASIC2.56□□□□□ -2
CLDN6P56747 AC073348.1-201ENST00000623002 331 ntBASIC2.56□□□□□ -2
CLDN6P56747 AC027309.3-201ENST00000623419 351 ntBASIC2.56□□□□□ -2
CLDN6P56747 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.56□□□□□ -2
CLDN6P56747 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.56□□□□□ -2
CLDN6P56747 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.56□□□□□ -2
CLDN6P56747 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
CLDN6P56747 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.56□□□□□ -2
CLDN6P56747 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CLDN6P56747 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.55□□□□□ -2
CLDN6P56747 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.55□□□□□ -2
CLDN6P56747 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC2.55□□□□□ -2
CLDN6P56747 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CLDN6P56747 MIR181B1-201ENST00000385240 110 ntBASIC2.55□□□□□ -2
CLDN6P56747 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.55□□□□□ -2
CLDN6P56747 SNORD88.1-201ENST00000408684 91 ntBASIC2.55□□□□□ -2
CLDN6P56747 SUCLA2P2-201ENST00000417269 1309 ntBASIC2.55□□□□□ -2
CLDN6P56747 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.55□□□□□ -2
CLDN6P56747 MTCO2P1-201ENST00000424648 477 ntBASIC2.55□□□□□ -2
CLDN6P56747 UBE2D3P3-201ENST00000426992 425 ntBASIC2.55□□□□□ -2
CLDN6P56747 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC2.55□□□□□ -2
CLDN6P56747 AC092573.2-201ENST00000434546 243 ntBASIC2.55□□□□□ -2
CLDN6P56747 AC024082.2-201ENST00000434771 238 ntBASIC2.55□□□□□ -2
CLDN6P56747 MUPP-201ENST00000438111 566 ntBASIC2.55□□□□□ -2
CLDN6P56747 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.55□□□□□ -2
CLDN6P56747 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.55□□□□□ -2
CLDN6P56747 AC010099.1-201ENST00000455434 375 ntBASIC2.55□□□□□ -2
CLDN6P56747 AC104164.3-201ENST00000467363 1258 ntBASIC2.55□□□□□ -2
CLDN6P56747 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.55□□□□□ -2
CLDN6P56747 RNA5SP320-201ENST00000516263 124 ntBASIC2.55□□□□□ -2
CLDN6P56747 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.55□□□□□ -2
CLDN6P56747 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC2.55□□□□□ -2
CLDN6P56747 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.55□□□□□ -2
CLDN6P56747 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.55□□□□□ -2
CLDN6P56747 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.55□□□□□ -2
CLDN6P56747 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.55□□□□□ -2
CLDN6P56747 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.55□□□□□ -2
CLDN6P56747 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.55□□□□□ -2
CLDN6P56747 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2.55□□□□□ -2
CLDN6P56747 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.55□□□□□ -2
CLDN6P56747 AP000526.1-201ENST00000603308 1388 ntBASIC2.55□□□□□ -2
CLDN6P56747 AP000254.1-201ENST00000609934 520 ntBASIC2.55□□□□□ -2
CLDN6P56747 AC078880.5-201ENST00000617845 421 ntBASIC2.55□□□□□ -2
CLDN6P56747 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
CLDN6P56747 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.54□□□□□ -2
CLDN6P56747 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.54□□□□□ -2
CLDN6P56747 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.54□□□□□ -2
CLDN6P56747 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.54□□□□□ -2
CLDN6P56747 SNORD62.1-201ENST00000362541 86 ntBASIC2.54□□□□□ -2
CLDN6P56747 RNU6-468P-201ENST00000384003 109 ntBASIC2.54□□□□□ -2
CLDN6P56747 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.54□□□□□ -2
CLDN6P56747 MIR1289-2-201ENST00000408360 111 ntBASIC2.54□□□□□ -2
CLDN6P56747 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.54□□□□□ -2
CLDN6P56747 HMGN2P30-201ENST00000423237 256 ntBASIC2.54□□□□□ -2
CLDN6P56747 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.54□□□□□ -2
CLDN6P56747 AL121871.1-201ENST00000443413 436 ntBASIC2.54□□□□□ -2
CLDN6P56747 snoU13.15-201ENST00000459407 104 ntBASIC2.54□□□□□ -2
CLDN6P56747 RPL31P60-201ENST00000478450 367 ntBASIC2.54□□□□□ -2
CLDN6P56747 NAA50-206ENST00000493454 964 ntTSL 2 BASIC2.54□□□□□ -2
CLDN6P56747 KLRA1P-201ENST00000503499 986 ntBASIC2.54□□□□□ -2
CLDN6P56747 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.54□□□□□ -2
CLDN6P56747 EEF1A1P37-201ENST00000522748 715 ntBASIC2.54□□□□□ -2
CLDN6P56747 AC087272.1-201ENST00000523624 533 ntBASIC2.54□□□□□ -2
CLDN6P56747 OR7K1P-201ENST00000546439 926 ntBASIC2.54□□□□□ -2
CLDN6P56747 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.54□□□□□ -2
CLDN6P56747 AC093510.2-201ENST00000562820 896 ntBASIC2.54□□□□□ -2
CLDN6P56747 MIR3609-201ENST00000582661 80 ntBASIC2.54□□□□□ -2
CLDN6P56747 AC015688.2-201ENST00000584523 262 ntBASIC2.54□□□□□ -2
CLDN6P56747 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.54□□□□□ -2
CLDN6P56747 KC877982.1-201ENST00000602313 470 ntBASIC2.54□□□□□ -2
CLDN6P56747 AC091057.2-201ENST00000602594 792 ntBASIC2.54□□□□□ -2
CLDN6P56747 U73023.1-201ENST00000603134 700 ntBASIC2.54□□□□□ -2
CLDN6P56747 AC007621.1-201ENST00000604544 437 ntBASIC2.54□□□□□ -2
CLDN6P56747 AC010338.1-201ENST00000621823 717 ntBASIC2.54□□□□□ -2
CLDN6P56747 AC103798.2-201ENST00000624292 632 ntBASIC2.54□□□□□ -2
CLDN6P56747 AC008568.2-201ENST00000623862 2313 ntBASIC2.54□□□□□ -2
CLDN6P56747 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CLDN6P56747 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
CLDN6P56747 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CLDN6P56747 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.54□□□□□ -2
CLDN6P56747 AC009812.4-201ENST00000569134 1805 ntBASIC2.54□□□□□ -2
CLDN6P56747 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
CLDN6P56747 AC087359.1-201ENST00000508335 1740 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 129.8 ms