Protein–RNA interactions for Protein: P55318

FOXA3, Hepatocyte nuclear factor 3-gamma, humanhuman

Predicted RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3P55318 VPS26AP1-201ENST00000483197 979 ntBASIC1.63□□□□□ -2.15
FOXA3P55318 AC011825.1-201ENST00000484967 388 ntBASIC1.63□□□□□ -2.15
FOXA3P55318 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC1.63□□□□□ -2.15
FOXA3P55318 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.63□□□□□ -2.15
FOXA3P55318 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC1.63□□□□□ -2.15
FOXA3P55318 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC1.63□□□□□ -2.15
FOXA3P55318 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC1.63□□□□□ -2.15
FOXA3P55318 ANKRD36BP2-206ENST00000575193 1245 ntBASIC1.63□□□□□ -2.15
FOXA3P55318 MIR3935-201ENST00000583472 104 ntBASIC1.63□□□□□ -2.15
FOXA3P55318 MIR4448-201ENST00000584360 86 ntBASIC1.63□□□□□ -2.15
FOXA3P55318 APOOP1-201ENST00000604695 592 ntBASIC1.63□□□□□ -2.15
FOXA3P55318 OR10AB1P-201ENST00000609613 938 ntBASIC1.63□□□□□ -2.15
FOXA3P55318 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.63□□□□□ -2.15
FOXA3P55318 AL442067.2-201ENST00000614033 363 ntBASIC1.63□□□□□ -2.15
FOXA3P55318 AC098657.3-201ENST00000620434 263 ntBASIC1.63□□□□□ -2.15
FOXA3P55318 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
FOXA3P55318 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC1.63□□□□□ -2.15
FOXA3P55318 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC1.63□□□□□ -2.15
FOXA3P55318 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC1.63□□□□□ -2.15
FOXA3P55318 CENPCP1-201ENST00000533085 2578 ntBASIC1.63□□□□□ -2.15
FOXA3P55318 AC073346.2-201ENST00000624724 2058 ntBASIC1.63□□□□□ -2.15
FOXA3P55318 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.63□□□□□ -2.15
FOXA3P55318 MIR23B-201ENST00000384832 97 ntBASIC1.62□□□□□ -2.15
FOXA3P55318 AL122016.1-201ENST00000403365 367 ntBASIC1.62□□□□□ -2.15
FOXA3P55318 SUMO2P12-201ENST00000405924 140 ntBASIC1.62□□□□□ -2.15
FOXA3P55318 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC1.62□□□□□ -2.15
FOXA3P55318 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC1.62□□□□□ -2.15
FOXA3P55318 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC1.62□□□□□ -2.15
FOXA3P55318 AC090774.1-201ENST00000435925 246 ntBASIC1.62□□□□□ -2.15
FOXA3P55318 AL714022.1-201ENST00000439897 151 ntBASIC1.62□□□□□ -2.15
FOXA3P55318 OSTCP8-201ENST00000445117 448 ntBASIC1.62□□□□□ -2.15
FOXA3P55318 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC1.62□□□□□ -2.15
FOXA3P55318 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC1.62□□□□□ -2.15
FOXA3P55318 RNA5SP233-201ENST00000459153 113 ntBASIC1.62□□□□□ -2.15
FOXA3P55318 MTND4LP3-201ENST00000468320 276 ntBASIC1.62□□□□□ -2.15
FOXA3P55318 AC107626.1-201ENST00000471084 183 ntBASIC1.62□□□□□ -2.15
FOXA3P55318 AC116337.2-201ENST00000477662 156 ntBASIC1.62□□□□□ -2.15
FOXA3P55318 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.62□□□□□ -2.15
FOXA3P55318 LEF1-218ENST00000512172 598 ntTSL 2 BASIC1.62□□□□□ -2.15
FOXA3P55318 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC1.62□□□□□ -2.15
FOXA3P55318 AC108043.1-201ENST00000512696 574 ntBASIC1.62□□□□□ -2.15
FOXA3P55318 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC1.62□□□□□ -2.15
FOXA3P55318 UBTFL10-201ENST00000528532 562 ntBASIC1.62□□□□□ -2.15
FOXA3P55318 OR8K4P-201ENST00000534608 872 ntBASIC1.62□□□□□ -2.15
FOXA3P55318 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC1.62□□□□□ -2.15
FOXA3P55318 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC1.62□□□□□ -2.15
FOXA3P55318 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC1.62□□□□□ -2.15
FOXA3P55318 OR4K7P-201ENST00000580232 945 ntBASIC1.62□□□□□ -2.15
FOXA3P55318 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC1.62□□□□□ -2.15
FOXA3P55318 AC022069.1-201ENST00000582910 658 ntBASIC1.62□□□□□ -2.15
FOXA3P55318 CBX3P2-202ENST00000583365 535 ntBASIC1.62□□□□□ -2.15
FOXA3P55318 AL451007.1-201ENST00000595491 289 ntBASIC1.62□□□□□ -2.15
FOXA3P55318 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC1.62□□□□□ -2.15
FOXA3P55318 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.62□□□□□ -2.15
FOXA3P55318 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC1.62□□□□□ -2.15
FOXA3P55318 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
FOXA3P55318 MTND5P31-201ENST00000419366 1374 ntBASIC1.61□□□□□ -2.15
FOXA3P55318 SNORA67.4-201ENST00000384688 142 ntBASIC1.61□□□□□ -2.15
FOXA3P55318 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC1.61□□□□□ -2.15
FOXA3P55318 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC1.61□□□□□ -2.15
FOXA3P55318 RNU2-40P-201ENST00000410833 196 ntBASIC1.61□□□□□ -2.15
FOXA3P55318 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.61□□□□□ -2.15
FOXA3P55318 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.61□□□□□ -2.15
FOXA3P55318 NANOGP5-201ENST00000424456 877 ntBASIC1.61□□□□□ -2.15
FOXA3P55318 AL035410.1-201ENST00000427409 427 ntBASIC1.61□□□□□ -2.15
FOXA3P55318 AC092573.2-201ENST00000434546 243 ntBASIC1.61□□□□□ -2.15
FOXA3P55318 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC1.61□□□□□ -2.15
FOXA3P55318 AL118520.1-201ENST00000450770 291 ntBASIC1.61□□□□□ -2.15
FOXA3P55318 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC1.61□□□□□ -2.15
FOXA3P55318 HMGN3P1-201ENST00000453847 193 ntBASIC1.61□□□□□ -2.15
FOXA3P55318 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.61□□□□□ -2.15
FOXA3P55318 snoU109.4-201ENST00000458953 143 ntBASIC1.61□□□□□ -2.15
FOXA3P55318 COL6A4P2-205ENST00000509855 506 ntBASIC1.61□□□□□ -2.15
FOXA3P55318 RNU6-1095P-201ENST00000516148 108 ntBASIC1.61□□□□□ -2.15
FOXA3P55318 IGHVII-62-1-201ENST00000519283 235 ntBASIC1.61□□□□□ -2.15
FOXA3P55318 AC022634.1-201ENST00000520765 532 ntBASIC1.61□□□□□ -2.15
FOXA3P55318 EEF1B2P4-201ENST00000551398 348 ntBASIC1.61□□□□□ -2.15
FOXA3P55318 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC1.61□□□□□ -2.15
FOXA3P55318 AC008749.1-201ENST00000597650 306 ntBASIC1.61□□□□□ -2.15
FOXA3P55318 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.61□□□□□ -2.15
FOXA3P55318 AC079791.1-201ENST00000605356 973 ntBASIC1.61□□□□□ -2.15
FOXA3P55318 MIR6798-201ENST00000612887 67 ntBASIC1.61□□□□□ -2.15
FOXA3P55318 SDR42E1P2-201ENST00000614861 481 ntBASIC1.61□□□□□ -2.15
FOXA3P55318 AC025016.1-201ENST00000616746 682 ntBASIC1.61□□□□□ -2.15
FOXA3P55318 STMN1P1-201ENST00000617809 440 ntBASIC1.61□□□□□ -2.15
FOXA3P55318 SDR42E1P4-201ENST00000620894 481 ntBASIC1.61□□□□□ -2.15
FOXA3P55318 AP003399.1-201ENST00000637534 361 ntBASIC1.61□□□□□ -2.15
FOXA3P55318 PSMD5-AS1-215ENST00000640622 205 ntBASIC1.61□□□□□ -2.15
FOXA3P55318 ZNF663P-202ENST00000641770 1131 ntBASIC1.61□□□□□ -2.15
FOXA3P55318 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
FOXA3P55318 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC1.61□□□□□ -2.15
FOXA3P55318 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
FOXA3P55318 CCT4P2-201ENST00000233836 1548 ntBASIC1.61□□□□□ -2.15
FOXA3P55318 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.6□□□□□ -2.15
FOXA3P55318 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.6□□□□□ -2.15
FOXA3P55318 OR5J1P-201ENST00000313544 939 ntBASIC1.6□□□□□ -2.15
FOXA3P55318 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC1.6□□□□□ -2.15
FOXA3P55318 ZBTB8OSP1-201ENST00000342688 498 ntBASIC1.6□□□□□ -2.15
FOXA3P55318 AC092745.2-202ENST00000411880 369 ntBASIC1.6□□□□□ -2.15
FOXA3P55318 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms