Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.35□□□□□ -1.55
RNF144AP50876 SNORD91B-202ENST00000608459 222 ntBASIC5.35□□□□□ -1.55
RNF144AP50876 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.35□□□□□ -1.55
RNF144AP50876 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.35□□□□□ -1.55
RNF144AP50876 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RNF144AP50876 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
RNF144AP50876 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.35□□□□□ -1.55
RNF144AP50876 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
RNF144AP50876 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
RNF144AP50876 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
RNF144AP50876 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
RNF144AP50876 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RNF144AP50876 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
RNF144AP50876 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RNF144AP50876 AC007785.2-201ENST00000598627 1916 ntBASIC5.35□□□□□ -1.55
RNF144AP50876 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
RNF144AP50876 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.34□□□□□ -1.55
RNF144AP50876 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RNF144AP50876 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RNF144AP50876 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RNF144AP50876 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RNF144AP50876 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RNF144AP50876 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RNF144AP50876 Y_RNA.44-201ENST00000362676 108 ntBASIC5.34□□□□□ -1.55
RNF144AP50876 RFX3-203ENST00000381984 364 ntTSL 3 BASIC5.34□□□□□ -1.55
RNF144AP50876 RNY3P4-201ENST00000384428 101 ntBASIC5.34□□□□□ -1.55
RNF144AP50876 RNA5SP91-201ENST00000390902 119 ntBASIC5.34□□□□□ -1.55
RNF144AP50876 RPL11P3-201ENST00000395256 523 ntBASIC5.34□□□□□ -1.55
RNF144AP50876 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
RNF144AP50876 AL079342.1-201ENST00000401460 267 ntBASIC5.34□□□□□ -1.55
RNF144AP50876 MTCYBP2-201ENST00000407745 171 ntBASIC5.34□□□□□ -1.55
RNF144AP50876 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.34□□□□□ -1.55
RNF144AP50876 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC5.34□□□□□ -1.55
RNF144AP50876 AC138761.5-201ENST00000433967 325 ntBASIC5.34□□□□□ -1.55
RNF144AP50876 USP9YP7-201ENST00000436723 430 ntBASIC5.34□□□□□ -1.55
RNF144AP50876 MRPL48P1-201ENST00000445390 636 ntBASIC5.34□□□□□ -1.55
RNF144AP50876 USP9YP32-201ENST00000452432 430 ntBASIC5.34□□□□□ -1.55
RNF144AP50876 FRG2FP-204ENST00000453982 852 ntBASIC5.34□□□□□ -1.55
RNF144AP50876 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.34□□□□□ -1.55
RNF144AP50876 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.34□□□□□ -1.55
RNF144AP50876 RNU6-496P-201ENST00000516145 99 ntBASIC5.34□□□□□ -1.55
RNF144AP50876 RNU6-840P-201ENST00000517275 65 ntBASIC5.34□□□□□ -1.55
RNF144AP50876 RAB9BP1-201ENST00000519581 626 ntBASIC5.34□□□□□ -1.55
RNF144AP50876 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.34□□□□□ -1.55
RNF144AP50876 MIR3144-201ENST00000579460 79 ntBASIC5.34□□□□□ -1.55
RNF144AP50876 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC5.34□□□□□ -1.55
RNF144AP50876 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.34□□□□□ -1.55
RNF144AP50876 MIR8076-201ENST00000611401 83 ntBASIC5.34□□□□□ -1.55
RNF144AP50876 MIR6793-201ENST00000612376 63 ntBASIC5.34□□□□□ -1.55
RNF144AP50876 AC004852.3-201ENST00000614131 326 ntBASIC5.34□□□□□ -1.55
RNF144AP50876 AL139099.4-201ENST00000614802 114 ntBASIC5.34□□□□□ -1.55
RNF144AP50876 AL365265.1-201ENST00000621045 234 ntBASIC5.34□□□□□ -1.55
RNF144AP50876 AC097372.5-201ENST00000623665 376 ntBASIC5.34□□□□□ -1.55
RNF144AP50876 U6.106-201ENST00000636360 105 ntBASIC5.34□□□□□ -1.55
RNF144AP50876 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RNF144AP50876 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RNF144AP50876 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.34□□□□□ -1.56
RNF144AP50876 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
RNF144AP50876 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.56
RNF144AP50876 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.34□□□□□ -1.56
RNF144AP50876 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.34□□□□□ -1.56
RNF144AP50876 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.34□□□□□ -1.56
RNF144AP50876 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.34□□□□□ -1.56
RNF144AP50876 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
RNF144AP50876 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.33□□□□□ -1.56
RNF144AP50876 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
RNF144AP50876 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RNF144AP50876 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RNF144AP50876 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC5.33□□□□□ -1.56
RNF144AP50876 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
RNF144AP50876 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
RNF144AP50876 RNU6-937P-201ENST00000384325 106 ntBASIC5.33□□□□□ -1.56
RNF144AP50876 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
RNF144AP50876 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.33□□□□□ -1.56
RNF144AP50876 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RNF144AP50876 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.33□□□□□ -1.56
RNF144AP50876 LAMTOR3P1-201ENST00000428620 370 ntBASIC5.33□□□□□ -1.56
RNF144AP50876 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC5.33□□□□□ -1.56
RNF144AP50876 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.33□□□□□ -1.56
RNF144AP50876 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.33□□□□□ -1.56
RNF144AP50876 RPL7L1P1-201ENST00000448259 785 ntBASIC5.33□□□□□ -1.56
RNF144AP50876 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC5.33□□□□□ -1.56
RNF144AP50876 ACA64.1-201ENST00000459171 127 ntBASIC5.33□□□□□ -1.56
RNF144AP50876 RN7SKP210-201ENST00000459176 261 ntBASIC5.33□□□□□ -1.56
RNF144AP50876 AC092865.4-201ENST00000477936 615 ntBASIC5.33□□□□□ -1.56
RNF144AP50876 AC012158.1-204ENST00000483430 465 ntBASIC5.33□□□□□ -1.56
RNF144AP50876 RPL32P33-201ENST00000487023 394 ntBASIC5.33□□□□□ -1.56
RNF144AP50876 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.33□□□□□ -1.56
RNF144AP50876 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC5.33□□□□□ -1.56
RNF144AP50876 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC5.33□□□□□ -1.56
RNF144AP50876 RN7SKP277-201ENST00000516895 283 ntBASIC5.33□□□□□ -1.56
RNF144AP50876 AC109479.2-201ENST00000517842 174 ntBASIC5.33□□□□□ -1.56
RNF144AP50876 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC5.33□□□□□ -1.56
RNF144AP50876 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC5.33□□□□□ -1.56
RNF144AP50876 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC5.33□□□□□ -1.56
RNF144AP50876 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.33□□□□□ -1.56
RNF144AP50876 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.33□□□□□ -1.56
RNF144AP50876 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RNF144AP50876 AC009314.1-201ENST00000603871 304 ntBASIC5.33□□□□□ -1.56
RNF144AP50876 AC104465.1-201ENST00000611365 139 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms