Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 RPS29P33-201ENST00000456717 146 ntBASIC3.64□□□□□ -1.83
CENPAP49450 RPL38P1-201ENST00000460914 211 ntBASIC3.64□□□□□ -1.83
CENPAP49450 RN7SL459P-201ENST00000481078 302 ntBASIC3.64□□□□□ -1.83
CENPAP49450 RPL9P33-201ENST00000484311 566 ntBASIC3.64□□□□□ -1.83
CENPAP49450 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
CENPAP49450 RPL31P61-201ENST00000496160 376 ntBASIC3.64□□□□□ -1.83
CENPAP49450 AC105252.1-201ENST00000503089 286 ntBASIC3.64□□□□□ -1.83
CENPAP49450 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.64□□□□□ -1.83
CENPAP49450 AC026801.2-201ENST00000515352 425 ntBASIC3.64□□□□□ -1.83
CENPAP49450 NARSP2-201ENST00000518524 679 ntBASIC3.64□□□□□ -1.83
CENPAP49450 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.64□□□□□ -1.83
CENPAP49450 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.64□□□□□ -1.83
CENPAP49450 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.64□□□□□ -1.83
CENPAP49450 AP000857.1-201ENST00000532151 543 ntBASIC3.64□□□□□ -1.83
CENPAP49450 AC016957.1-201ENST00000534895 309 ntBASIC3.64□□□□□ -1.83
CENPAP49450 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC3.64□□□□□ -1.83
CENPAP49450 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.64□□□□□ -1.83
CENPAP49450 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.64□□□□□ -1.83
CENPAP49450 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.64□□□□□ -1.83
CENPAP49450 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC3.64□□□□□ -1.83
CENPAP49450 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.64□□□□□ -1.83
CENPAP49450 AC245014.2-201ENST00000603689 287 ntBASIC3.64□□□□□ -1.83
CENPAP49450 AL356218.2-201ENST00000605264 187 ntBASIC3.64□□□□□ -1.83
CENPAP49450 AC246785.4-201ENST00000605374 287 ntBASIC3.64□□□□□ -1.83
CENPAP49450 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.64□□□□□ -1.83
CENPAP49450 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.64□□□□□ -1.83
CENPAP49450 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
CENPAP49450 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.64□□□□□ -1.83
CENPAP49450 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CENPAP49450 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.64□□□□□ -1.83
CENPAP49450 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
CENPAP49450 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.64□□□□□ -1.83
CENPAP49450 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CENPAP49450 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.64□□□□□ -1.83
CENPAP49450 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CENPAP49450 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CENPAP49450 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CENPAP49450 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.63□□□□□ -1.83
CENPAP49450 RNU5E-1-201ENST00000362477 120 ntBASIC3.63□□□□□ -1.83
CENPAP49450 RN7SKP226-201ENST00000364912 300 ntBASIC3.63□□□□□ -1.83
CENPAP49450 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.63□□□□□ -1.83
CENPAP49450 AL807761.1-201ENST00000417622 171 ntBASIC3.63□□□□□ -1.83
CENPAP49450 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC3.63□□□□□ -1.83
CENPAP49450 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.63□□□□□ -1.83
CENPAP49450 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.63□□□□□ -1.83
CENPAP49450 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.63□□□□□ -1.83
CENPAP49450 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.63□□□□□ -1.83
CENPAP49450 AC104850.1-201ENST00000435940 476 ntBASIC3.63□□□□□ -1.83
CENPAP49450 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.63□□□□□ -1.83
CENPAP49450 RPL35AP22-201ENST00000436855 335 ntBASIC3.63□□□□□ -1.83
CENPAP49450 AF228730.2-201ENST00000438784 848 ntBASIC3.63□□□□□ -1.83
CENPAP49450 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.63□□□□□ -1.83
CENPAP49450 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.63□□□□□ -1.83
CENPAP49450 NDUFAF4P4-201ENST00000454883 502 ntBASIC3.63□□□□□ -1.83
CENPAP49450 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.63□□□□□ -1.83
CENPAP49450 AC108059.3-201ENST00000456388 214 ntBASIC3.63□□□□□ -1.83
CENPAP49450 RNU7-59P-201ENST00000459101 61 ntBASIC3.63□□□□□ -1.83
CENPAP49450 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.63□□□□□ -1.83
CENPAP49450 AC006463.2-201ENST00000473326 348 ntBASIC3.63□□□□□ -1.83
CENPAP49450 RBM43P1-201ENST00000476891 1081 ntBASIC3.63□□□□□ -1.83
CENPAP49450 AC069499.1-201ENST00000489433 509 ntBASIC3.63□□□□□ -1.83
CENPAP49450 RPL7P23-201ENST00000493874 747 ntBASIC3.63□□□□□ -1.83
CENPAP49450 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
CENPAP49450 AC108475.1-201ENST00000507880 950 ntBASIC3.63□□□□□ -1.83
CENPAP49450 AC108043.1-201ENST00000512696 574 ntBASIC3.63□□□□□ -1.83
CENPAP49450 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.63□□□□□ -1.83
CENPAP49450 Vault.3-201ENST00000516676 95 ntBASIC3.63□□□□□ -1.83
CENPAP49450 RNU6-1073P-201ENST00000517182 106 ntBASIC3.63□□□□□ -1.83
CENPAP49450 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3.63□□□□□ -1.83
CENPAP49450 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.63□□□□□ -1.83
CENPAP49450 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.63□□□□□ -1.83
CENPAP49450 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CENPAP49450 AC018630.1-201ENST00000541376 925 ntBASIC3.63□□□□□ -1.83
CENPAP49450 AC006960.3-201ENST00000561845 705 ntBASIC3.63□□□□□ -1.83
CENPAP49450 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.63□□□□□ -1.83
CENPAP49450 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC3.63□□□□□ -1.83
CENPAP49450 AL161729.3-201ENST00000603533 673 ntBASIC3.63□□□□□ -1.83
CENPAP49450 MIR98-201ENST00000606724 119 ntBASIC3.63□□□□□ -1.83
CENPAP49450 AC245517.5-201ENST00000611529 162 ntBASIC3.63□□□□□ -1.83
CENPAP49450 AC114781.5-201ENST00000615297 108 ntBASIC3.63□□□□□ -1.83
CENPAP49450 AC006338.1-201ENST00000618453 749 ntBASIC3.63□□□□□ -1.83
CENPAP49450 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.63□□□□□ -1.83
CENPAP49450 AL138713.1-201ENST00000624026 2130 ntBASIC3.63□□□□□ -1.83
CENPAP49450 LRRC77P-213ENST00000637727 880 ntBASIC3.63□□□□□ -1.83
CENPAP49450 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.63□□□□□ -1.83
CENPAP49450 AC004925.1-201ENST00000624256 2706 ntBASIC3.63□□□□□ -1.83
CENPAP49450 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CENPAP49450 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CENPAP49450 AL365440.1-201ENST00000436135 2167 ntBASIC3.62□□□□□ -1.83
CENPAP49450 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.62□□□□□ -1.83
CENPAP49450 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CENPAP49450 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.62□□□□□ -1.83
CENPAP49450 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.62□□□□□ -1.83
CENPAP49450 AP001350.1-201ENST00000601906 1524 ntBASIC3.62□□□□□ -1.83
CENPAP49450 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CENPAP49450 Y_RNA.6-201ENST00000362350 114 ntBASIC3.62□□□□□ -1.83
CENPAP49450 RNY3P13-201ENST00000365542 102 ntBASIC3.62□□□□□ -1.83
CENPAP49450 RNU2-43P-201ENST00000410306 190 ntBASIC3.62□□□□□ -1.83
CENPAP49450 RPL26P29-201ENST00000415623 438 ntBASIC3.62□□□□□ -1.83
CENPAP49450 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms