Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 TRIM60P13-201ENST00000432350 1283 ntBASIC2.09□□□□□ -2.07
CDC34P49427 AC236972.1-201ENST00000433225 199 ntBASIC2.09□□□□□ -2.07
CDC34P49427 Z82210.1-201ENST00000440037 231 ntBASIC2.09□□□□□ -2.07
CDC34P49427 DDX3P2-201ENST00000446138 111 ntBASIC2.09□□□□□ -2.07
CDC34P49427 MTND3P4-201ENST00000453537 303 ntBASIC2.09□□□□□ -2.07
CDC34P49427 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.09□□□□□ -2.07
CDC34P49427 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.09□□□□□ -2.07
CDC34P49427 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
CDC34P49427 AC108734.3-201ENST00000481241 1165 ntBASIC2.09□□□□□ -2.07
CDC34P49427 RPS27P21-201ENST00000486977 252 ntBASIC2.09□□□□□ -2.07
CDC34P49427 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC2.09□□□□□ -2.07
CDC34P49427 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC2.09□□□□□ -2.07
CDC34P49427 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
CDC34P49427 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.09□□□□□ -2.07
CDC34P49427 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.09□□□□□ -2.07
CDC34P49427 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC2.09□□□□□ -2.07
CDC34P49427 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.09□□□□□ -2.07
CDC34P49427 AL161729.4-201ENST00000604650 476 ntBASIC2.09□□□□□ -2.07
CDC34P49427 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC2.09□□□□□ -2.07
CDC34P49427 AC008498.1-201ENST00000613012 531 ntBASIC2.09□□□□□ -2.07
CDC34P49427 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC2.09□□□□□ -2.07
CDC34P49427 AC039056.2-201ENST00000622261 511 ntBASIC2.09□□□□□ -2.07
CDC34P49427 AC026422.1-201ENST00000623961 452 ntBASIC2.09□□□□□ -2.07
CDC34P49427 AC012442.3-202ENST00000636742 206 ntBASIC2.09□□□□□ -2.07
CDC34P49427 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.09□□□□□ -2.08
CDC34P49427 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.08
CDC34P49427 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.08□□□□□ -2.08
CDC34P49427 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.08□□□□□ -2.08
CDC34P49427 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
CDC34P49427 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CDC34P49427 RNU6-217P-201ENST00000384164 104 ntBASIC2.08□□□□□ -2.08
CDC34P49427 MIR514A1-201ENST00000385133 98 ntBASIC2.08□□□□□ -2.08
CDC34P49427 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
CDC34P49427 AL356379.1-201ENST00000414105 126 ntBASIC2.08□□□□□ -2.08
CDC34P49427 CCDC58P2-201ENST00000417131 366 ntBASIC2.08□□□□□ -2.08
CDC34P49427 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.08□□□□□ -2.08
CDC34P49427 AC092047.1-201ENST00000424997 240 ntBASIC2.08□□□□□ -2.08
CDC34P49427 AC005300.1-201ENST00000428401 373 ntBASIC2.08□□□□□ -2.08
CDC34P49427 HMGB1P9-201ENST00000429856 646 ntBASIC2.08□□□□□ -2.08
CDC34P49427 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.08□□□□□ -2.08
CDC34P49427 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.08□□□□□ -2.08
CDC34P49427 BNIP3P2-201ENST00000441221 577 ntBASIC2.08□□□□□ -2.08
CDC34P49427 GPM6BP3-201ENST00000442797 145 ntBASIC2.08□□□□□ -2.08
CDC34P49427 OSTCP8-201ENST00000445117 448 ntBASIC2.08□□□□□ -2.08
CDC34P49427 CACYBPP2-201ENST00000453625 678 ntBASIC2.08□□□□□ -2.08
CDC34P49427 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.08□□□□□ -2.08
CDC34P49427 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC2.08□□□□□ -2.08
CDC34P49427 AC006499.5-201ENST00000505037 514 ntBASIC2.08□□□□□ -2.08
CDC34P49427 AC118282.2-201ENST00000508739 374 ntBASIC2.08□□□□□ -2.08
CDC34P49427 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.08□□□□□ -2.08
CDC34P49427 RNU6-885P-201ENST00000516607 104 ntBASIC2.08□□□□□ -2.08
CDC34P49427 IGKV3OR22-2-201ENST00000517943 313 ntBASIC2.08□□□□□ -2.08
CDC34P49427 AC103783.1-201ENST00000520506 373 ntBASIC2.08□□□□□ -2.08
CDC34P49427 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC2.08□□□□□ -2.08
CDC34P49427 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.08□□□□□ -2.08
CDC34P49427 PSMA2P1-201ENST00000526365 646 ntBASIC2.08□□□□□ -2.08
CDC34P49427 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC2.08□□□□□ -2.08
CDC34P49427 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC2.08□□□□□ -2.08
CDC34P49427 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC2.08□□□□□ -2.08
CDC34P49427 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.08□□□□□ -2.08
CDC34P49427 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.08□□□□□ -2.08
CDC34P49427 OR4K8P-201ENST00000578842 1048 ntBASIC2.08□□□□□ -2.08
CDC34P49427 AC025588.2-201ENST00000604851 466 ntBASIC2.08□□□□□ -2.08
CDC34P49427 AC245100.7-201ENST00000609678 442 ntBASIC2.08□□□□□ -2.08
CDC34P49427 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.08□□□□□ -2.08
CDC34P49427 AC026634.1-201ENST00000634369 198 ntBASIC2.08□□□□□ -2.08
CDC34P49427 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.08□□□□□ -2.08
CDC34P49427 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.08□□□□□ -2.08
CDC34P49427 AL355596.1-201ENST00000565399 3996 ntBASIC2.08□□□□□ -2.08
CDC34P49427 MTCO1P12-201ENST00000414273 1543 ntBASIC2.07□□□□□ -2.08
CDC34P49427 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.07□□□□□ -2.08
CDC34P49427 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
CDC34P49427 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
CDC34P49427 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
CDC34P49427 RNA5SP515-201ENST00000364570 118 ntBASIC2.07□□□□□ -2.08
CDC34P49427 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
CDC34P49427 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
CDC34P49427 OR1L1-202ENST00000373686 1083 ntBASIC2.07□□□□□ -2.08
CDC34P49427 RNU6-741P-201ENST00000383889 107 ntBASIC2.07□□□□□ -2.08
CDC34P49427 RNU6-1083P-201ENST00000384022 107 ntBASIC2.07□□□□□ -2.08
CDC34P49427 AP002784.2-201ENST00000397300 549 ntBASIC2.07□□□□□ -2.08
CDC34P49427 UBA52P6-201ENST00000399822 382 ntBASIC2.07□□□□□ -2.08
CDC34P49427 U3.40-201ENST00000408706 208 ntBASIC2.07□□□□□ -2.08
CDC34P49427 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.07□□□□□ -2.08
CDC34P49427 AL445183.3-201ENST00000414168 502 ntBASIC2.07□□□□□ -2.08
CDC34P49427 KRR1P1-201ENST00000419430 803 ntBASIC2.07□□□□□ -2.08
CDC34P49427 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.07□□□□□ -2.08
CDC34P49427 AL159987.2-201ENST00000432754 307 ntBASIC2.07□□□□□ -2.08
CDC34P49427 AC112220.1-201ENST00000434628 355 ntBASIC2.07□□□□□ -2.08
CDC34P49427 CDC42P1-201ENST00000456658 548 ntBASIC2.07□□□□□ -2.08
CDC34P49427 AP1S2P1-201ENST00000457344 379 ntBASIC2.07□□□□□ -2.08
CDC34P49427 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.07□□□□□ -2.08
CDC34P49427 AC006445.1-201ENST00000491925 405 ntBASIC2.07□□□□□ -2.08
CDC34P49427 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.07□□□□□ -2.08
CDC34P49427 RNU6-1256P-201ENST00000516539 103 ntBASIC2.07□□□□□ -2.08
CDC34P49427 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC2.07□□□□□ -2.08
CDC34P49427 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.07□□□□□ -2.08
CDC34P49427 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC2.07□□□□□ -2.08
CDC34P49427 H3F3AP1-201ENST00000559984 334 ntBASIC2.07□□□□□ -2.08
CDC34P49427 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms