Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.13□□□□□ -1.91
NKX2-1P43699 AC068790.4-201ENST00000602474 263 ntBASIC3.13□□□□□ -1.91
NKX2-1P43699 AC091805.2-201ENST00000603848 235 ntBASIC3.13□□□□□ -1.91
NKX2-1P43699 SEPT7P9-203ENST00000604116 343 ntBASIC3.13□□□□□ -1.91
NKX2-1P43699 AC004067.1-201ENST00000608733 700 ntBASIC3.13□□□□□ -1.91
NKX2-1P43699 BX323046.1-201ENST00000610145 535 ntBASIC3.13□□□□□ -1.91
NKX2-1P43699 MIR6868-201ENST00000611215 58 ntBASIC3.13□□□□□ -1.91
NKX2-1P43699 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
NKX2-1P43699 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.13□□□□□ -1.91
NKX2-1P43699 AC008121.2-201ENST00000614647 523 ntBASIC3.13□□□□□ -1.91
NKX2-1P43699 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC3.13□□□□□ -1.91
NKX2-1P43699 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.13□□□□□ -1.91
NKX2-1P43699 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
NKX2-1P43699 U6.98-201ENST00000637157 84 ntBASIC3.13□□□□□ -1.91
NKX2-1P43699 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
NKX2-1P43699 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
NKX2-1P43699 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.13□□□□□ -1.91
NKX2-1P43699 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
NKX2-1P43699 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
NKX2-1P43699 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.13□□□□□ -1.91
NKX2-1P43699 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
NKX2-1P43699 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
NKX2-1P43699 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.12□□□□□ -1.91
NKX2-1P43699 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
NKX2-1P43699 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
NKX2-1P43699 AC092447.7-201ENST00000422212 1621 ntBASIC3.12□□□□□ -1.91
NKX2-1P43699 RNA5SP295-201ENST00000362655 121 ntBASIC3.12□□□□□ -1.91
NKX2-1P43699 U8.3-201ENST00000363321 132 ntBASIC3.12□□□□□ -1.91
NKX2-1P43699 AP000567.1-201ENST00000406413 156 ntBASIC3.12□□□□□ -1.91
NKX2-1P43699 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.12□□□□□ -1.91
NKX2-1P43699 RN7SKP285-201ENST00000410137 318 ntBASIC3.12□□□□□ -1.91
NKX2-1P43699 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.12□□□□□ -1.91
NKX2-1P43699 AC016769.2-201ENST00000414815 475 ntBASIC3.12□□□□□ -1.91
NKX2-1P43699 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.12□□□□□ -1.91
NKX2-1P43699 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.12□□□□□ -1.91
NKX2-1P43699 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.12□□□□□ -1.91
NKX2-1P43699 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
NKX2-1P43699 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.12□□□□□ -1.91
NKX2-1P43699 TPT1P14-201ENST00000448018 505 ntBASIC3.12□□□□□ -1.91
NKX2-1P43699 AL162389.1-201ENST00000449233 177 ntBASIC3.12□□□□□ -1.91
NKX2-1P43699 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.12□□□□□ -1.91
NKX2-1P43699 RPL21P11-201ENST00000461458 483 ntBASIC3.12□□□□□ -1.91
NKX2-1P43699 AC004801.2-202ENST00000463559 283 ntBASIC3.12□□□□□ -1.91
NKX2-1P43699 HSPE1P6-201ENST00000479457 291 ntBASIC3.12□□□□□ -1.91
NKX2-1P43699 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.12□□□□□ -1.91
NKX2-1P43699 RPL7P47-201ENST00000497299 556 ntBASIC3.12□□□□□ -1.91
NKX2-1P43699 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC3.12□□□□□ -1.91
NKX2-1P43699 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.12□□□□□ -1.91
NKX2-1P43699 AF131216.2-201ENST00000512316 564 ntBASIC3.12□□□□□ -1.91
NKX2-1P43699 ARL2BPP6-201ENST00000512757 439 ntBASIC3.12□□□□□ -1.91
NKX2-1P43699 RNU2-46P-201ENST00000517038 113 ntBASIC3.12□□□□□ -1.91
NKX2-1P43699 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.12□□□□□ -1.91
NKX2-1P43699 AP000907.2-201ENST00000530827 353 ntBASIC3.12□□□□□ -1.91
NKX2-1P43699 AP000857.1-201ENST00000532151 543 ntBASIC3.12□□□□□ -1.91
NKX2-1P43699 AP002453.2-201ENST00000533503 320 ntBASIC3.12□□□□□ -1.91
NKX2-1P43699 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.12□□□□□ -1.91
NKX2-1P43699 SYF2P1-201ENST00000550658 413 ntBASIC3.12□□□□□ -1.91
NKX2-1P43699 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.12□□□□□ -1.91
NKX2-1P43699 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.12□□□□□ -1.91
NKX2-1P43699 AL157394.1-201ENST00000562983 1224 ntBASIC3.12□□□□□ -1.91
NKX2-1P43699 AC055876.1-202ENST00000567053 138 ntBASIC3.12□□□□□ -1.91
NKX2-1P43699 RPL23AP84-201ENST00000571193 464 ntBASIC3.12□□□□□ -1.91
NKX2-1P43699 MIR4277-201ENST00000578298 84 ntBASIC3.12□□□□□ -1.91
NKX2-1P43699 MIR4738-201ENST00000579134 87 ntBASIC3.12□□□□□ -1.91
NKX2-1P43699 MIR4425-201ENST00000580572 84 ntBASIC3.12□□□□□ -1.91
NKX2-1P43699 MIR3118-1-201ENST00000581787 76 ntBASIC3.12□□□□□ -1.91
NKX2-1P43699 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.12□□□□□ -1.91
NKX2-1P43699 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.12□□□□□ -1.91
NKX2-1P43699 IPO5P1-202ENST00000600039 287 ntBASIC3.12□□□□□ -1.91
NKX2-1P43699 AL022154.1-201ENST00000604698 785 ntBASIC3.12□□□□□ -1.91
NKX2-1P43699 AC007038.2-201ENST00000608095 740 ntBASIC3.12□□□□□ -1.91
NKX2-1P43699 AC013476.2-201ENST00000614456 459 ntBASIC3.12□□□□□ -1.91
NKX2-1P43699 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.12□□□□□ -1.91
NKX2-1P43699 AC072046.2-201ENST00000618366 268 ntBASIC3.12□□□□□ -1.91
NKX2-1P43699 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.12□□□□□ -1.91
NKX2-1P43699 AC136475.10-201ENST00000620253 385 ntBASIC3.12□□□□□ -1.91
NKX2-1P43699 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.12□□□□□ -1.91
NKX2-1P43699 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
NKX2-1P43699 AP001148.1-201ENST00000624124 2359 ntBASIC3.12□□□□□ -1.91
NKX2-1P43699 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
NKX2-1P43699 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
NKX2-1P43699 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.12□□□□□ -1.91
NKX2-1P43699 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
NKX2-1P43699 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.11□□□□□ -1.91
NKX2-1P43699 AL136164.4-201ENST00000625013 2135 ntBASIC3.11□□□□□ -1.91
NKX2-1P43699 TANK-205ENST00000405852 2155 ntTSL 5 BASIC3.11□□□□□ -1.91
NKX2-1P43699 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.11□□□□□ -1.91
NKX2-1P43699 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.11□□□□□ -1.91
NKX2-1P43699 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
NKX2-1P43699 RNU4-1-201ENST00000363925 141 ntBASIC3.11□□□□□ -1.91
NKX2-1P43699 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.11□□□□□ -1.91
NKX2-1P43699 RNU6-259P-201ENST00000383999 107 ntBASIC3.11□□□□□ -1.91
NKX2-1P43699 RNU5A-6P-201ENST00000384136 116 ntBASIC3.11□□□□□ -1.91
NKX2-1P43699 RNU6-1103P-201ENST00000384150 107 ntBASIC3.11□□□□□ -1.91
NKX2-1P43699 Y_RNA.517-201ENST00000384551 106 ntBASIC3.11□□□□□ -1.91
NKX2-1P43699 MIR184-201ENST00000384962 84 ntBASIC3.11□□□□□ -1.91
NKX2-1P43699 U3.22-201ENST00000391120 215 ntBASIC3.11□□□□□ -1.91
NKX2-1P43699 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC3.11□□□□□ -1.91
NKX2-1P43699 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.11□□□□□ -1.91
NKX2-1P43699 AC108032.1-201ENST00000416706 207 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 154.6 ms