Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 AC080013.4-201ENST00000607624 649 ntBASIC2.78□□□□□ -1.96
SHMT2P34897 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC2.78□□□□□ -1.96
SHMT2P34897 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.78□□□□□ -1.96
SHMT2P34897 AC010338.1-201ENST00000621823 717 ntBASIC2.78□□□□□ -1.96
SHMT2P34897 AC095031.1-201ENST00000623685 672 ntBASIC2.78□□□□□ -1.96
SHMT2P34897 AC009039.2-201ENST00000624524 529 ntBASIC2.78□□□□□ -1.96
SHMT2P34897 AL137790.1-201ENST00000634283 177 ntBASIC2.78□□□□□ -1.96
SHMT2P34897 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.78□□□□□ -1.96
SHMT2P34897 AC097714.1-201ENST00000511272 1647 ntBASIC2.78□□□□□ -1.96
SHMT2P34897 OR4G11P-202ENST00000642116 1414 ntBASIC2.77□□□□□ -1.97
SHMT2P34897 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.77□□□□□ -1.97
SHMT2P34897 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SHMT2P34897 RPL9P7-201ENST00000330965 580 ntBASIC2.77□□□□□ -1.97
SHMT2P34897 RNU6-621P-201ENST00000364752 109 ntBASIC2.77□□□□□ -1.97
SHMT2P34897 SNORD116.1-201ENST00000365628 92 ntBASIC2.77□□□□□ -1.97
SHMT2P34897 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.77□□□□□ -1.97
SHMT2P34897 MIR181A2-201ENST00000384863 110 ntBASIC2.77□□□□□ -1.97
SHMT2P34897 RNU2-47P-201ENST00000410649 186 ntBASIC2.77□□□□□ -1.97
SHMT2P34897 AL137014.1-201ENST00000420490 1226 ntBASIC2.77□□□□□ -1.97
SHMT2P34897 AL645937.1-202ENST00000421799 937 ntBASIC2.77□□□□□ -1.97
SHMT2P34897 MTCO2P23-201ENST00000425216 680 ntBASIC2.77□□□□□ -1.97
SHMT2P34897 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.77□□□□□ -1.97
SHMT2P34897 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC2.77□□□□□ -1.97
SHMT2P34897 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.77□□□□□ -1.97
SHMT2P34897 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC2.77□□□□□ -1.97
SHMT2P34897 MUPP-201ENST00000438111 566 ntBASIC2.77□□□□□ -1.97
SHMT2P34897 AC004854.1-201ENST00000440356 349 ntBASIC2.77□□□□□ -1.97
SHMT2P34897 RPL37P4-201ENST00000448908 268 ntBASIC2.77□□□□□ -1.97
SHMT2P34897 AL353691.1-201ENST00000451332 387 ntBASIC2.77□□□□□ -1.97
SHMT2P34897 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.77□□□□□ -1.97
SHMT2P34897 RPL23AP31-201ENST00000456160 467 ntBASIC2.77□□□□□ -1.97
SHMT2P34897 MLLT10P2-201ENST00000506434 249 ntBASIC2.77□□□□□ -1.97
SHMT2P34897 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.77□□□□□ -1.97
SHMT2P34897 AC117522.3-201ENST00000507974 584 ntBASIC2.77□□□□□ -1.97
SHMT2P34897 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.77□□□□□ -1.97
SHMT2P34897 AP001269.3-201ENST00000588718 329 ntBASIC2.77□□□□□ -1.97
SHMT2P34897 BNIP3P26-201ENST00000600827 554 ntBASIC2.77□□□□□ -1.97
SHMT2P34897 Z99129.2-201ENST00000619967 314 ntBASIC2.77□□□□□ -1.97
SHMT2P34897 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
SHMT2P34897 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.77□□□□□ -1.97
SHMT2P34897 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.76□□□□□ -1.97
SHMT2P34897 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.76□□□□□ -1.97
SHMT2P34897 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.76□□□□□ -1.97
SHMT2P34897 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC2.76□□□□□ -1.97
SHMT2P34897 MIR512-1-201ENST00000384913 84 ntBASIC2.76□□□□□ -1.97
SHMT2P34897 AL591034.1-201ENST00000407447 340 ntBASIC2.76□□□□□ -1.97
SHMT2P34897 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
SHMT2P34897 RPS15AP38-201ENST00000413110 372 ntBASIC2.76□□□□□ -1.97
SHMT2P34897 ATG3P1-201ENST00000419507 911 ntBASIC2.76□□□□□ -1.97
SHMT2P34897 AL513175.2-201ENST00000422071 443 ntBASIC2.76□□□□□ -1.97
SHMT2P34897 UBE2D3P2-201ENST00000424409 445 ntBASIC2.76□□□□□ -1.97
SHMT2P34897 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.76□□□□□ -1.97
SHMT2P34897 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.76□□□□□ -1.97
SHMT2P34897 AC093156.1-201ENST00000440382 670 ntBASIC2.76□□□□□ -1.97
SHMT2P34897 AL645638.1-201ENST00000440519 361 ntBASIC2.76□□□□□ -1.97
SHMT2P34897 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC2.76□□□□□ -1.97
SHMT2P34897 RPL39P40-201ENST00000445481 146 ntBASIC2.76□□□□□ -1.97
SHMT2P34897 AC005410.1-202ENST00000460347 485 ntBASIC2.76□□□□□ -1.97
SHMT2P34897 SNORA31.8-201ENST00000516327 108 ntBASIC2.76□□□□□ -1.97
SHMT2P34897 RNA5SP367-201ENST00000516557 118 ntBASIC2.76□□□□□ -1.97
SHMT2P34897 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.76□□□□□ -1.97
SHMT2P34897 AP000857.1-201ENST00000532151 543 ntBASIC2.76□□□□□ -1.97
SHMT2P34897 EIF4BP1-201ENST00000554881 351 ntBASIC2.76□□□□□ -1.97
SHMT2P34897 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.76□□□□□ -1.97
SHMT2P34897 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC2.76□□□□□ -1.97
SHMT2P34897 VN1R78P-201ENST00000597393 564 ntBASIC2.76□□□□□ -1.97
SHMT2P34897 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.76□□□□□ -1.97
SHMT2P34897 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC2.76□□□□□ -1.97
SHMT2P34897 AC006386.2-201ENST00000624491 75 ntBASIC2.76□□□□□ -1.97
SHMT2P34897 AC012005.1-201ENST00000624575 75 ntBASIC2.76□□□□□ -1.97
SHMT2P34897 FAM35BP-202ENST00000497389 3337 ntBASIC2.76□□□□□ -1.97
SHMT2P34897 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
SHMT2P34897 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SHMT2P34897 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.75□□□□□ -1.97
SHMT2P34897 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.75□□□□□ -1.97
SHMT2P34897 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.75□□□□□ -1.97
SHMT2P34897 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SHMT2P34897 RNU1-35P-201ENST00000362782 153 ntBASIC2.75□□□□□ -1.97
SHMT2P34897 Y_RNA.192-201ENST00000363977 102 ntBASIC2.75□□□□□ -1.97
SHMT2P34897 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC2.75□□□□□ -1.97
SHMT2P34897 MIR135A2-201ENST00000384854 100 ntBASIC2.75□□□□□ -1.97
SHMT2P34897 RPL23AP29-201ENST00000397284 453 ntBASIC2.75□□□□□ -1.97
SHMT2P34897 AL136372.1-201ENST00000403060 228 ntBASIC2.75□□□□□ -1.97
SHMT2P34897 RNU6-1077P-201ENST00000410506 102 ntBASIC2.75□□□□□ -1.97
SHMT2P34897 AL592310.1-201ENST00000414330 671 ntBASIC2.75□□□□□ -1.97
SHMT2P34897 MTATP6P27-201ENST00000416987 621 ntBASIC2.75□□□□□ -1.97
SHMT2P34897 SSXP9-201ENST00000417503 292 ntBASIC2.75□□□□□ -1.97
SHMT2P34897 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC2.75□□□□□ -1.97
SHMT2P34897 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC2.75□□□□□ -1.97
SHMT2P34897 NANOGP5-201ENST00000424456 877 ntBASIC2.75□□□□□ -1.97
SHMT2P34897 AC092648.1-201ENST00000425870 423 ntBASIC2.75□□□□□ -1.97
SHMT2P34897 MTCYBP45-201ENST00000435243 565 ntBASIC2.75□□□□□ -1.97
SHMT2P34897 RPL21P2-201ENST00000440049 481 ntBASIC2.75□□□□□ -1.97
SHMT2P34897 RPS24P13-201ENST00000442520 397 ntBASIC2.75□□□□□ -1.97
SHMT2P34897 AL135938.1-201ENST00000443141 297 ntBASIC2.75□□□□□ -1.97
SHMT2P34897 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC2.75□□□□□ -1.97
SHMT2P34897 AL009048.1-201ENST00000450437 298 ntBASIC2.75□□□□□ -1.97
SHMT2P34897 OFD1P7Y-201ENST00000454643 1155 ntBASIC2.75□□□□□ -1.97
SHMT2P34897 RN7SL297P-201ENST00000483161 293 ntBASIC2.75□□□□□ -1.97
SHMT2P34897 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms