Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 AC034222.1-201ENST00000494052 532 ntBASIC3.71□□□□□ -1.82
HOXA13P31271 OR2A20P-203ENST00000498397 1268 ntBASIC3.71□□□□□ -1.82
HOXA13P31271 PCBP2P3-201ENST00000509726 843 ntBASIC3.71□□□□□ -1.82
HOXA13P31271 OR5BM1P-201ENST00000512021 366 ntBASIC3.71□□□□□ -1.82
HOXA13P31271 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.71□□□□□ -1.82
HOXA13P31271 AC017037.2-201ENST00000513850 890 ntBASIC3.71□□□□□ -1.82
HOXA13P31271 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.71□□□□□ -1.82
HOXA13P31271 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC3.71□□□□□ -1.82
HOXA13P31271 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.71□□□□□ -1.82
HOXA13P31271 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.71□□□□□ -1.82
HOXA13P31271 FAM60BP-201ENST00000578364 658 ntBASIC3.71□□□□□ -1.82
HOXA13P31271 MIR5004-201ENST00000579078 107 ntBASIC3.71□□□□□ -1.82
HOXA13P31271 MIR544B-201ENST00000582372 78 ntBASIC3.71□□□□□ -1.82
HOXA13P31271 AP001981.2-201ENST00000603241 418 ntBASIC3.71□□□□□ -1.82
HOXA13P31271 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC3.71□□□□□ -1.82
HOXA13P31271 SNORD39.4-201ENST00000620099 78 ntBASIC3.71□□□□□ -1.82
HOXA13P31271 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
HOXA13P31271 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.71□□□□□ -1.82
HOXA13P31271 AC048347.1-201ENST00000624621 427 ntBASIC3.71□□□□□ -1.82
HOXA13P31271 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HOXA13P31271 GABPAP-201ENST00000419271 1356 ntBASIC3.71□□□□□ -1.82
HOXA13P31271 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.71□□□□□ -1.82
HOXA13P31271 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HOXA13P31271 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HOXA13P31271 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HOXA13P31271 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
HOXA13P31271 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HOXA13P31271 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
HOXA13P31271 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.71□□□□□ -1.82
HOXA13P31271 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HOXA13P31271 ANKRD20A17P-201ENST00000511745 1330 ntBASIC3.7□□□□□ -1.82
HOXA13P31271 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.7□□□□□ -1.82
HOXA13P31271 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
HOXA13P31271 ELL2P3-201ENST00000457883 1602 ntBASIC3.7□□□□□ -1.82
HOXA13P31271 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
HOXA13P31271 FRG1BP-201ENST00000278882 761 ntBASIC3.7□□□□□ -1.82
HOXA13P31271 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
HOXA13P31271 RNU5A-2P-201ENST00000384337 116 ntBASIC3.7□□□□□ -1.82
HOXA13P31271 RN7SKP266-201ENST00000410232 287 ntBASIC3.7□□□□□ -1.82
HOXA13P31271 BEND7P1-201ENST00000422058 457 ntBASIC3.7□□□□□ -1.82
HOXA13P31271 AL353678.1-201ENST00000422735 741 ntBASIC3.7□□□□□ -1.82
HOXA13P31271 KATNBL1P3-201ENST00000443475 909 ntBASIC3.7□□□□□ -1.82
HOXA13P31271 AP000542.1-201ENST00000448473 371 ntBASIC3.7□□□□□ -1.82
HOXA13P31271 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.7□□□□□ -1.82
HOXA13P31271 RPL7P47-201ENST00000497299 556 ntBASIC3.7□□□□□ -1.82
HOXA13P31271 HMGB1P22-201ENST00000505315 124 ntBASIC3.7□□□□□ -1.82
HOXA13P31271 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.7□□□□□ -1.82
HOXA13P31271 AC022447.3-201ENST00000506865 495 ntBASIC3.7□□□□□ -1.82
HOXA13P31271 MTND1P22-201ENST00000510572 951 ntBASIC3.7□□□□□ -1.82
HOXA13P31271 AC021146.1-201ENST00000511202 716 ntBASIC3.7□□□□□ -1.82
HOXA13P31271 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.7□□□□□ -1.82
HOXA13P31271 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.7□□□□□ -1.82
HOXA13P31271 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC3.7□□□□□ -1.82
HOXA13P31271 SNORA70.14-201ENST00000516205 110 ntBASIC3.7□□□□□ -1.82
HOXA13P31271 AC103783.1-201ENST00000520506 373 ntBASIC3.7□□□□□ -1.82
HOXA13P31271 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3.7□□□□□ -1.82
HOXA13P31271 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.7□□□□□ -1.82
HOXA13P31271 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.7□□□□□ -1.82
HOXA13P31271 AC018630.1-201ENST00000541376 925 ntBASIC3.7□□□□□ -1.82
HOXA13P31271 TGIF1P1-201ENST00000558095 802 ntBASIC3.7□□□□□ -1.82
HOXA13P31271 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC3.7□□□□□ -1.82
HOXA13P31271 MIR3915-201ENST00000578518 97 ntBASIC3.7□□□□□ -1.82
HOXA13P31271 MIR2682-201ENST00000580305 110 ntBASIC3.7□□□□□ -1.82
HOXA13P31271 AP001004.1-201ENST00000582468 324 ntBASIC3.7□□□□□ -1.82
HOXA13P31271 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC3.7□□□□□ -1.82
HOXA13P31271 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.7□□□□□ -1.82
HOXA13P31271 AP001330.4-201ENST00000604350 154 ntBASIC3.7□□□□□ -1.82
HOXA13P31271 AL022099.1-201ENST00000604551 712 ntBASIC3.7□□□□□ -1.82
HOXA13P31271 AC005000.2-201ENST00000605468 310 ntBASIC3.7□□□□□ -1.82
HOXA13P31271 AC100793.4-201ENST00000613683 429 ntBASIC3.7□□□□□ -1.82
HOXA13P31271 AL157817.1-201ENST00000614264 790 ntBASIC3.7□□□□□ -1.82
HOXA13P31271 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.7□□□□□ -1.82
HOXA13P31271 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC3.7□□□□□ -1.82
HOXA13P31271 ZNF833P-201ENST00000424938 1494 ntBASIC3.7□□□□□ -1.82
HOXA13P31271 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.7□□□□□ -1.82
HOXA13P31271 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
HOXA13P31271 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
HOXA13P31271 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.69□□□□□ -1.82
HOXA13P31271 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.69□□□□□ -1.82
HOXA13P31271 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
HOXA13P31271 AC092447.10-201ENST00000620607 1652 ntBASIC3.69□□□□□ -1.82
HOXA13P31271 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
HOXA13P31271 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.69□□□□□ -1.82
HOXA13P31271 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
HOXA13P31271 RNU6-1155P-201ENST00000363554 107 ntBASIC3.69□□□□□ -1.82
HOXA13P31271 RNU6-173P-201ENST00000364215 104 ntBASIC3.69□□□□□ -1.82
HOXA13P31271 SNORD6-201ENST00000365444 73 ntBASIC3.69□□□□□ -1.82
HOXA13P31271 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.69□□□□□ -1.82
HOXA13P31271 SNORD116-9-201ENST00000384000 95 ntBASIC3.69□□□□□ -1.82
HOXA13P31271 Y_RNA.436-201ENST00000384097 102 ntBASIC3.69□□□□□ -1.82
HOXA13P31271 SNORD116-3-201ENST00000384287 95 ntBASIC3.69□□□□□ -1.82
HOXA13P31271 SNORD116-7-201ENST00000384404 95 ntBASIC3.69□□□□□ -1.82
HOXA13P31271 SNORD116-5-201ENST00000384462 95 ntBASIC3.69□□□□□ -1.82
HOXA13P31271 MIR1305-201ENST00000408300 86 ntBASIC3.69□□□□□ -1.82
HOXA13P31271 RNU2-71P-201ENST00000411395 189 ntBASIC3.69□□□□□ -1.82
HOXA13P31271 BTF3L4P1-201ENST00000413813 468 ntBASIC3.69□□□□□ -1.82
HOXA13P31271 CCDC58P2-201ENST00000417131 366 ntBASIC3.69□□□□□ -1.82
HOXA13P31271 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
HOXA13P31271 SSXP9-201ENST00000417503 292 ntBASIC3.69□□□□□ -1.82
HOXA13P31271 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 137.3 ms