Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 WDR78-207ENST00000488333 613 ntTSL 3 BASIC2.8□□□□□ -1.96
HOXA9P31269 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.8□□□□□ -1.96
HOXA9P31269 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC2.8□□□□□ -1.96
HOXA9P31269 OR8K4P-201ENST00000534608 872 ntBASIC2.8□□□□□ -1.96
HOXA9P31269 HSPE1P20-201ENST00000538133 289 ntBASIC2.8□□□□□ -1.96
HOXA9P31269 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.8□□□□□ -1.96
HOXA9P31269 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.8□□□□□ -1.96
HOXA9P31269 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.8□□□□□ -1.96
HOXA9P31269 MIR5708-201ENST00000579723 85 ntBASIC2.8□□□□□ -1.96
HOXA9P31269 AC245036.5-201ENST00000596330 847 ntBASIC2.8□□□□□ -1.96
HOXA9P31269 AC245884.10-201ENST00000597355 337 ntBASIC2.8□□□□□ -1.96
HOXA9P31269 RPL23AP78-201ENST00000599928 470 ntBASIC2.8□□□□□ -1.96
HOXA9P31269 AP003973.1-201ENST00000604639 691 ntBASIC2.8□□□□□ -1.96
HOXA9P31269 RPL23AP88-201ENST00000605759 454 ntBASIC2.8□□□□□ -1.96
HOXA9P31269 AL157770.1-201ENST00000623049 439 ntBASIC2.8□□□□□ -1.96
HOXA9P31269 CTSLP2-204ENST00000629029 392 ntBASIC2.8□□□□□ -1.96
HOXA9P31269 CUL1P1-201ENST00000509510 2425 ntBASIC2.8□□□□□ -1.96
HOXA9P31269 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC2.8□□□□□ -1.96
HOXA9P31269 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
HOXA9P31269 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
HOXA9P31269 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
HOXA9P31269 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
HOXA9P31269 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
HOXA9P31269 RNU6-251P-201ENST00000363235 104 ntBASIC2.79□□□□□ -1.96
HOXA9P31269 RNU4-51P-201ENST00000364206 140 ntBASIC2.79□□□□□ -1.96
HOXA9P31269 RNU6-115P-201ENST00000364310 107 ntBASIC2.79□□□□□ -1.96
HOXA9P31269 RNA5SP139-201ENST00000364340 117 ntBASIC2.79□□□□□ -1.96
HOXA9P31269 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC2.79□□□□□ -1.96
HOXA9P31269 Y_RNA.472-201ENST00000384322 102 ntBASIC2.79□□□□□ -1.96
HOXA9P31269 AL136133.1-201ENST00000413694 376 ntBASIC2.79□□□□□ -1.96
HOXA9P31269 AL451074.5-201ENST00000415894 435 ntBASIC2.79□□□□□ -1.96
HOXA9P31269 MYL8P-204ENST00000431574 518 ntBASIC2.79□□□□□ -1.96
HOXA9P31269 AC005345.1-201ENST00000431868 217 ntBASIC2.79□□□□□ -1.96
HOXA9P31269 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.79□□□□□ -1.96
HOXA9P31269 AC004854.1-201ENST00000440356 349 ntBASIC2.79□□□□□ -1.96
HOXA9P31269 OR10R1P-201ENST00000441524 1141 ntBASIC2.79□□□□□ -1.96
HOXA9P31269 AL358794.1-201ENST00000445689 381 ntBASIC2.79□□□□□ -1.96
HOXA9P31269 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.79□□□□□ -1.96
HOXA9P31269 RPL23AP20-201ENST00000447965 421 ntBASIC2.79□□□□□ -1.96
HOXA9P31269 AC079776.3-201ENST00000450665 370 ntBASIC2.79□□□□□ -1.96
HOXA9P31269 RPL23AP31-201ENST00000456160 467 ntBASIC2.79□□□□□ -1.96
HOXA9P31269 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC2.79□□□□□ -1.96
HOXA9P31269 SNORA9.3-201ENST00000516383 129 ntBASIC2.79□□□□□ -1.96
HOXA9P31269 SCARNA1-201ENST00000517138 166 ntBASIC2.79□□□□□ -1.96
HOXA9P31269 AP001804.3-201ENST00000525146 880 ntBASIC2.79□□□□□ -1.96
HOXA9P31269 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.79□□□□□ -1.96
HOXA9P31269 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.79□□□□□ -1.96
HOXA9P31269 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.79□□□□□ -1.96
HOXA9P31269 AL355812.1-201ENST00000603215 216 ntBASIC2.79□□□□□ -1.96
HOXA9P31269 AL160237.3-201ENST00000604114 1013 ntBASIC2.79□□□□□ -1.96
HOXA9P31269 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC2.79□□□□□ -1.96
HOXA9P31269 AC016597.2-201ENST00000613256 341 ntBASIC2.79□□□□□ -1.96
HOXA9P31269 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
HOXA9P31269 AC010975.3-201ENST00000618727 978 ntBASIC2.79□□□□□ -1.96
HOXA9P31269 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC2.79□□□□□ -1.96
HOXA9P31269 AC002064.3-201ENST00000623448 346 ntBASIC2.79□□□□□ -1.96
HOXA9P31269 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC2.79□□□□□ -1.96
HOXA9P31269 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC2.79□□□□□ -1.96
HOXA9P31269 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
HOXA9P31269 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
HOXA9P31269 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
HOXA9P31269 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
HOXA9P31269 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
HOXA9P31269 AP000526.1-201ENST00000603308 1388 ntBASIC2.78□□□□□ -1.96
HOXA9P31269 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
HOXA9P31269 SNORD65.1-201ENST00000390889 71 ntBASIC2.78□□□□□ -1.96
HOXA9P31269 SSXP10-201ENST00000402595 565 ntBASIC2.78□□□□□ -1.96
HOXA9P31269 AL133264.1-201ENST00000407157 562 ntBASIC2.78□□□□□ -1.96
HOXA9P31269 RNA5SP492-201ENST00000411330 114 ntBASIC2.78□□□□□ -1.96
HOXA9P31269 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.78□□□□□ -1.96
HOXA9P31269 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC2.78□□□□□ -1.96
HOXA9P31269 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.78□□□□□ -1.96
HOXA9P31269 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.78□□□□□ -1.96
HOXA9P31269 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.78□□□□□ -1.96
HOXA9P31269 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC2.78□□□□□ -1.96
HOXA9P31269 AC114973.1-201ENST00000429057 632 ntBASIC2.78□□□□□ -1.96
HOXA9P31269 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC2.78□□□□□ -1.96
HOXA9P31269 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.78□□□□□ -1.96
HOXA9P31269 AC093155.1-201ENST00000440164 826 ntBASIC2.78□□□□□ -1.96
HOXA9P31269 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.78□□□□□ -1.96
HOXA9P31269 COX6CP2-201ENST00000444980 225 ntBASIC2.78□□□□□ -1.96
HOXA9P31269 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC2.78□□□□□ -1.96
HOXA9P31269 AL009048.1-201ENST00000450437 298 ntBASIC2.78□□□□□ -1.96
HOXA9P31269 HMGN3P1-201ENST00000453847 193 ntBASIC2.78□□□□□ -1.96
HOXA9P31269 AL031183.1-201ENST00000457667 207 ntBASIC2.78□□□□□ -1.96
HOXA9P31269 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.78□□□□□ -1.96
HOXA9P31269 AC079203.1-201ENST00000487972 404 ntBASIC2.78□□□□□ -1.96
HOXA9P31269 AC084024.2-201ENST00000503480 791 ntBASIC2.78□□□□□ -1.96
HOXA9P31269 UBE2V1P12-201ENST00000503954 474 ntBASIC2.78□□□□□ -1.96
HOXA9P31269 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
HOXA9P31269 AC104057.1-201ENST00000515547 497 ntBASIC2.78□□□□□ -1.96
HOXA9P31269 OR10V3P-201ENST00000525712 725 ntBASIC2.78□□□□□ -1.96
HOXA9P31269 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC2.78□□□□□ -1.96
HOXA9P31269 LRRC6P1-201ENST00000532188 885 ntBASIC2.78□□□□□ -1.96
HOXA9P31269 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC2.78□□□□□ -1.96
HOXA9P31269 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.78□□□□□ -1.96
HOXA9P31269 AC074051.3-201ENST00000570238 358 ntBASIC2.78□□□□□ -1.96
HOXA9P31269 NUTF2P8-201ENST00000604593 363 ntBASIC2.78□□□□□ -1.96
HOXA9P31269 AL133507.1-201ENST00000605269 557 ntBASIC2.78□□□□□ -1.96
HOXA9P31269 AC128687.1-201ENST00000605304 619 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms