Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
HLA-DPA1P20036 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HLA-DPA1P20036 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
HLA-DPA1P20036 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HLA-DPA1P20036 OR1S2-201ENST00000302592 978 ntBASIC3.2□□□□□ -1.9
HLA-DPA1P20036 SNORA38.1-201ENST00000364172 131 ntBASIC3.2□□□□□ -1.9
HLA-DPA1P20036 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
HLA-DPA1P20036 RNU6-1035P-201ENST00000384477 107 ntBASIC3.2□□□□□ -1.9
HLA-DPA1P20036 RNU6-114P-201ENST00000384704 105 ntBASIC3.2□□□□□ -1.9
HLA-DPA1P20036 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HLA-DPA1P20036 RNU4-47P-201ENST00000410876 114 ntBASIC3.2□□□□□ -1.9
HLA-DPA1P20036 MTCYBP38-201ENST00000417160 1123 ntBASIC3.2□□□□□ -1.9
HLA-DPA1P20036 AL354692.1-201ENST00000423044 315 ntBASIC3.2□□□□□ -1.9
HLA-DPA1P20036 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.2□□□□□ -1.9
HLA-DPA1P20036 HMGN2P30-201ENST00000423237 256 ntBASIC3.2□□□□□ -1.9
HLA-DPA1P20036 AC012498.1-201ENST00000424037 437 ntBASIC3.2□□□□□ -1.9
HLA-DPA1P20036 RPS25P9-201ENST00000435591 252 ntBASIC3.2□□□□□ -1.9
HLA-DPA1P20036 AC129850.1-201ENST00000436203 508 ntBASIC3.2□□□□□ -1.9
HLA-DPA1P20036 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.2□□□□□ -1.9
HLA-DPA1P20036 ARPC3P1-201ENST00000437218 533 ntBASIC3.2□□□□□ -1.9
HLA-DPA1P20036 RPL23AP22-201ENST00000437556 453 ntBASIC3.2□□□□□ -1.9
HLA-DPA1P20036 AC006028.1-201ENST00000438379 402 ntBASIC3.2□□□□□ -1.9
HLA-DPA1P20036 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC3.2□□□□□ -1.9
HLA-DPA1P20036 RPS3AP12-201ENST00000443616 753 ntBASIC3.2□□□□□ -1.9
HLA-DPA1P20036 AC112653.1-201ENST00000443851 386 ntBASIC3.2□□□□□ -1.9
HLA-DPA1P20036 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.2□□□□□ -1.9
HLA-DPA1P20036 MTND1P9-201ENST00000453775 944 ntBASIC3.2□□□□□ -1.9
HLA-DPA1P20036 HMGB1P36-201ENST00000487709 576 ntBASIC3.2□□□□□ -1.9
HLA-DPA1P20036 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.2□□□□□ -1.9
HLA-DPA1P20036 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.2□□□□□ -1.9
HLA-DPA1P20036 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.2□□□□□ -1.9
HLA-DPA1P20036 SNORA31.21-201ENST00000517180 77 ntBASIC3.2□□□□□ -1.9
HLA-DPA1P20036 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.2□□□□□ -1.9
HLA-DPA1P20036 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.2□□□□□ -1.9
HLA-DPA1P20036 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.2□□□□□ -1.9
HLA-DPA1P20036 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.2□□□□□ -1.9
HLA-DPA1P20036 RPL23AP84-201ENST00000571193 464 ntBASIC3.2□□□□□ -1.9
HLA-DPA1P20036 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.2□□□□□ -1.9
HLA-DPA1P20036 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.2□□□□□ -1.9
HLA-DPA1P20036 AL606834.2-201ENST00000602954 668 ntBASIC3.2□□□□□ -1.9
HLA-DPA1P20036 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.2□□□□□ -1.9
HLA-DPA1P20036 AC138932.5-201ENST00000617759 563 ntBASIC3.2□□□□□ -1.9
HLA-DPA1P20036 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.2□□□□□ -1.9
HLA-DPA1P20036 AC073308.1-201ENST00000623696 305 ntBASIC3.2□□□□□ -1.9
HLA-DPA1P20036 AC110079.1-202ENST00000635213 138 ntBASIC3.2□□□□□ -1.9
HLA-DPA1P20036 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.2□□□□□ -1.9
HLA-DPA1P20036 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
HLA-DPA1P20036 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.19□□□□□ -1.9
HLA-DPA1P20036 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
HLA-DPA1P20036 AL049641.1-201ENST00000441055 1948 ntBASIC3.19□□□□□ -1.9
HLA-DPA1P20036 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HLA-DPA1P20036 RNU6-744P-201ENST00000365557 107 ntBASIC3.19□□□□□ -1.9
HLA-DPA1P20036 RNU6-1316P-201ENST00000384242 108 ntBASIC3.19□□□□□ -1.9
HLA-DPA1P20036 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HLA-DPA1P20036 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HLA-DPA1P20036 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.19□□□□□ -1.9
HLA-DPA1P20036 Z85995.1-201ENST00000415547 335 ntBASIC3.19□□□□□ -1.9
HLA-DPA1P20036 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.19□□□□□ -1.9
HLA-DPA1P20036 Z75741.1-201ENST00000446793 314 ntBASIC3.19□□□□□ -1.9
HLA-DPA1P20036 RPS26P21-201ENST00000475397 348 ntBASIC3.19□□□□□ -1.9
HLA-DPA1P20036 AC021146.8-201ENST00000507455 733 ntBASIC3.19□□□□□ -1.9
HLA-DPA1P20036 AC010374.2-201ENST00000512933 535 ntBASIC3.19□□□□□ -1.9
HLA-DPA1P20036 SNORA70.24-201ENST00000517233 118 ntBASIC3.19□□□□□ -1.9
HLA-DPA1P20036 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.19□□□□□ -1.9
HLA-DPA1P20036 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.19□□□□□ -1.9
HLA-DPA1P20036 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.19□□□□□ -1.9
HLA-DPA1P20036 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
HLA-DPA1P20036 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.19□□□□□ -1.9
HLA-DPA1P20036 NBEAP1-201ENST00000554452 979 ntBASIC3.19□□□□□ -1.9
HLA-DPA1P20036 MIR5195-201ENST00000583555 115 ntBASIC3.19□□□□□ -1.9
HLA-DPA1P20036 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.19□□□□□ -1.9
HLA-DPA1P20036 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.19□□□□□ -1.9
HLA-DPA1P20036 MIR7112-201ENST00000616126 65 ntBASIC3.19□□□□□ -1.9
HLA-DPA1P20036 AC009268.2-201ENST00000621925 457 ntBASIC3.19□□□□□ -1.9
HLA-DPA1P20036 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.19□□□□□ -1.9
HLA-DPA1P20036 AC007785.2-201ENST00000598627 1916 ntBASIC3.19□□□□□ -1.9
HLA-DPA1P20036 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.19□□□□□ -1.9
HLA-DPA1P20036 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
HLA-DPA1P20036 AC010680.1-201ENST00000590024 3590 ntBASIC3.18□□□□□ -1.9
HLA-DPA1P20036 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
HLA-DPA1P20036 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HLA-DPA1P20036 RNA5SP293-201ENST00000410527 113 ntBASIC3.18□□□□□ -1.9
HLA-DPA1P20036 RNU6-516P-201ENST00000411381 104 ntBASIC3.18□□□□□ -1.9
HLA-DPA1P20036 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC3.18□□□□□ -1.9
HLA-DPA1P20036 AL390023.1-201ENST00000428836 262 ntBASIC3.18□□□□□ -1.9
HLA-DPA1P20036 SAR1AP4-201ENST00000429225 591 ntBASIC3.18□□□□□ -1.9
HLA-DPA1P20036 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.18□□□□□ -1.9
HLA-DPA1P20036 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.18□□□□□ -1.9
HLA-DPA1P20036 EEF1E1P1-201ENST00000446998 430 ntBASIC3.18□□□□□ -1.9
HLA-DPA1P20036 AC125238.1-201ENST00000448842 249 ntBASIC3.18□□□□□ -1.9
HLA-DPA1P20036 PAXBP1P1-201ENST00000449315 447 ntBASIC3.18□□□□□ -1.9
HLA-DPA1P20036 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.18□□□□□ -1.9
HLA-DPA1P20036 RN7SL863P-201ENST00000462370 296 ntBASIC3.18□□□□□ -1.9
HLA-DPA1P20036 MTND4LP3-201ENST00000468320 276 ntBASIC3.18□□□□□ -1.9
HLA-DPA1P20036 AC134050.1-201ENST00000495088 933 ntBASIC3.18□□□□□ -1.9
HLA-DPA1P20036 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.18□□□□□ -1.9
HLA-DPA1P20036 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.18□□□□□ -1.9
HLA-DPA1P20036 SNORA31.26-201ENST00000517250 137 ntBASIC3.18□□□□□ -1.9
HLA-DPA1P20036 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC3.18□□□□□ -1.9
HLA-DPA1P20036 AP002748.2-201ENST00000528671 348 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms