Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.11□□□□□ -2.07
COL11A1P12107 CABYRP1-201ENST00000465493 1045 ntBASIC2.11□□□□□ -2.07
COL11A1P12107 AC090071.1-201ENST00000507713 644 ntBASIC2.11□□□□□ -2.07
COL11A1P12107 HMGB1P47-201ENST00000511281 589 ntBASIC2.11□□□□□ -2.07
COL11A1P12107 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.11□□□□□ -2.07
COL11A1P12107 AC109635.4-202ENST00000531666 412 ntBASIC2.11□□□□□ -2.07
COL11A1P12107 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.11□□□□□ -2.07
COL11A1P12107 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.11□□□□□ -2.07
COL11A1P12107 AC115085.1-201ENST00000588924 229 ntBASIC2.11□□□□□ -2.07
COL11A1P12107 AL049779.4-201ENST00000604500 156 ntBASIC2.11□□□□□ -2.07
COL11A1P12107 KATNBL1P5-201ENST00000605015 517 ntBASIC2.11□□□□□ -2.07
COL11A1P12107 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
COL11A1P12107 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.11□□□□□ -2.07
COL11A1P12107 AP000553.5-201ENST00000641933 54 ntBASIC2.11□□□□□ -2.07
COL11A1P12107 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.11□□□□□ -2.07
COL11A1P12107 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.1□□□□□ -2.07
COL11A1P12107 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
COL11A1P12107 U8.10-201ENST00000384260 133 ntBASIC2.1□□□□□ -2.07
COL11A1P12107 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC2.1□□□□□ -2.07
COL11A1P12107 HIGD1AP11-201ENST00000438361 280 ntBASIC2.1□□□□□ -2.07
COL11A1P12107 XKRY2-201ENST00000442362 1093 ntBASIC2.1□□□□□ -2.07
COL11A1P12107 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC2.1□□□□□ -2.07
COL11A1P12107 RPS15AP1-201ENST00000457423 391 ntBASIC2.1□□□□□ -2.07
COL11A1P12107 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC2.1□□□□□ -2.07
COL11A1P12107 snoU13.7-201ENST00000459220 104 ntBASIC2.1□□□□□ -2.07
COL11A1P12107 RNU1-40P-201ENST00000516816 164 ntBASIC2.1□□□□□ -2.07
COL11A1P12107 RNU1-97P-201ENST00000516872 164 ntBASIC2.1□□□□□ -2.07
COL11A1P12107 POLR2KP1-201ENST00000553226 168 ntBASIC2.1□□□□□ -2.07
COL11A1P12107 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.1□□□□□ -2.07
COL11A1P12107 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.1□□□□□ -2.07
COL11A1P12107 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.1□□□□□ -2.07
COL11A1P12107 AC084824.5-201ENST00000612009 413 ntBASIC2.1□□□□□ -2.07
COL11A1P12107 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
COL11A1P12107 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.1□□□□□ -2.07
COL11A1P12107 SNORA27.3-201ENST00000364937 134 ntBASIC2.1□□□□□ -2.07
COL11A1P12107 MIR421-201ENST00000365696 85 ntBASIC2.1□□□□□ -2.07
COL11A1P12107 RNU2-72P-201ENST00000411175 163 ntBASIC2.1□□□□□ -2.07
COL11A1P12107 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.1□□□□□ -2.07
COL11A1P12107 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.1□□□□□ -2.07
COL11A1P12107 DPPA2P1-201ENST00000428060 556 ntBASIC2.1□□□□□ -2.07
COL11A1P12107 AC027124.2-201ENST00000428249 105 ntBASIC2.1□□□□□ -2.07
COL11A1P12107 HMGB1P45-201ENST00000435986 653 ntBASIC2.1□□□□□ -2.07
COL11A1P12107 MTND4P15-201ENST00000437913 1033 ntBASIC2.1□□□□□ -2.07
COL11A1P12107 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC2.1□□□□□ -2.07
COL11A1P12107 ARL5AP3-201ENST00000439327 386 ntBASIC2.1□□□□□ -2.07
COL11A1P12107 TRIM60P18-201ENST00000441518 828 ntBASIC2.1□□□□□ -2.07
COL11A1P12107 RPL23AP76-201ENST00000441860 458 ntBASIC2.1□□□□□ -2.07
COL11A1P12107 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
COL11A1P12107 SSR3-208ENST00000496050 579 ntTSL 4 BASIC2.1□□□□□ -2.07
COL11A1P12107 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.1□□□□□ -2.07
COL11A1P12107 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC2.1□□□□□ -2.07
COL11A1P12107 AC008494.2-201ENST00000514544 370 ntBASIC2.1□□□□□ -2.07
COL11A1P12107 RNU6-1053P-201ENST00000515930 101 ntBASIC2.1□□□□□ -2.07
COL11A1P12107 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.1□□□□□ -2.07
COL11A1P12107 AL049870.4-201ENST00000555741 486 ntBASIC2.1□□□□□ -2.07
COL11A1P12107 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC2.1□□□□□ -2.07
COL11A1P12107 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC2.1□□□□□ -2.07
COL11A1P12107 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC2.1□□□□□ -2.07
COL11A1P12107 AC040174.2-201ENST00000602701 465 ntBASIC2.1□□□□□ -2.07
COL11A1P12107 AL133393.1-201ENST00000603277 287 ntBASIC2.1□□□□□ -2.07
COL11A1P12107 AC025016.1-201ENST00000616746 682 ntBASIC2.1□□□□□ -2.07
COL11A1P12107 AL353748.2-201ENST00000622148 471 ntBASIC2.1□□□□□ -2.07
COL11A1P12107 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
COL11A1P12107 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
COL11A1P12107 HMGB1P10-201ENST00000395823 563 ntBASIC2.09□□□□□ -2.08
COL11A1P12107 RPL31P2-201ENST00000413849 377 ntBASIC2.09□□□□□ -2.08
COL11A1P12107 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.09□□□□□ -2.08
COL11A1P12107 LAMTOR3P1-201ENST00000428620 370 ntBASIC2.09□□□□□ -2.08
COL11A1P12107 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC2.09□□□□□ -2.08
COL11A1P12107 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC2.09□□□□□ -2.08
COL11A1P12107 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.09□□□□□ -2.08
COL11A1P12107 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC2.09□□□□□ -2.08
COL11A1P12107 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC2.09□□□□□ -2.08
COL11A1P12107 COL6A4P2-205ENST00000509855 506 ntBASIC2.09□□□□□ -2.08
COL11A1P12107 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.09□□□□□ -2.08
COL11A1P12107 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC2.09□□□□□ -2.08
COL11A1P12107 HMGB1P1-201ENST00000522557 636 ntBASIC2.09□□□□□ -2.08
COL11A1P12107 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.09□□□□□ -2.08
COL11A1P12107 MIR3908-201ENST00000579798 126 ntBASIC2.09□□□□□ -2.08
COL11A1P12107 AC009220.3-201ENST00000604318 586 ntBASIC2.09□□□□□ -2.08
COL11A1P12107 AC113194.1-201ENST00000606037 500 ntBASIC2.09□□□□□ -2.08
COL11A1P12107 AC135803.1-201ENST00000608748 565 ntBASIC2.09□□□□□ -2.08
COL11A1P12107 AC006023.2-201ENST00000609916 167 ntBASIC2.09□□□□□ -2.08
COL11A1P12107 MFSD8-245ENST00000641743 948 ntBASIC2.09□□□□□ -2.08
COL11A1P12107 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.09□□□□□ -2.08
COL11A1P12107 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.08□□□□□ -2.08
COL11A1P12107 MTND4P31-201ENST00000425607 1343 ntBASIC2.08□□□□□ -2.08
COL11A1P12107 AC011978.2-201ENST00000569835 2054 ntBASIC2.08□□□□□ -2.08
COL11A1P12107 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
COL11A1P12107 RNA5SP190-201ENST00000365222 118 ntBASIC2.08□□□□□ -2.08
COL11A1P12107 RNU6-650P-201ENST00000365658 111 ntBASIC2.08□□□□□ -2.08
COL11A1P12107 MIR607-201ENST00000385241 96 ntBASIC2.08□□□□□ -2.08
COL11A1P12107 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
COL11A1P12107 AL590664.1-201ENST00000448065 339 ntBASIC2.08□□□□□ -2.08
COL11A1P12107 AC025033.1-201ENST00000463883 194 ntBASIC2.08□□□□□ -2.08
COL11A1P12107 AC140059.1-201ENST00000489238 361 ntBASIC2.08□□□□□ -2.08
COL11A1P12107 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC2.08□□□□□ -2.08
COL11A1P12107 SNORA31.11-201ENST00000516528 139 ntBASIC2.08□□□□□ -2.08
COL11A1P12107 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC2.08□□□□□ -2.08
COL11A1P12107 AC073111.2-201ENST00000605657 1075 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms