Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
RAB40ALP0C0E4 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
RAB40ALP0C0E4 RNY4P24-201ENST00000362735 96 ntBASIC3.33□□□□□ -1.88
RAB40ALP0C0E4 RNU5F-6P-201ENST00000362979 116 ntBASIC3.33□□□□□ -1.88
RAB40ALP0C0E4 RNU6-525P-201ENST00000363685 104 ntBASIC3.33□□□□□ -1.88
RAB40ALP0C0E4 SNORD116-8-201ENST00000384365 95 ntBASIC3.33□□□□□ -1.88
RAB40ALP0C0E4 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.33□□□□□ -1.88
RAB40ALP0C0E4 YPEL5P1-201ENST00000419731 367 ntBASIC3.33□□□□□ -1.88
RAB40ALP0C0E4 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC3.33□□□□□ -1.88
RAB40ALP0C0E4 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.33□□□□□ -1.88
RAB40ALP0C0E4 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RAB40ALP0C0E4 AC090774.1-201ENST00000435925 246 ntBASIC3.33□□□□□ -1.88
RAB40ALP0C0E4 AL592447.1-201ENST00000447592 540 ntBASIC3.33□□□□□ -1.88
RAB40ALP0C0E4 RPL36AP33-201ENST00000450395 310 ntBASIC3.33□□□□□ -1.88
RAB40ALP0C0E4 KATNBL1P6-201ENST00000453433 915 ntBASIC3.33□□□□□ -1.88
RAB40ALP0C0E4 RPL23AP62-201ENST00000463396 453 ntBASIC3.33□□□□□ -1.88
RAB40ALP0C0E4 RPL21P10-201ENST00000463521 490 ntBASIC3.33□□□□□ -1.88
RAB40ALP0C0E4 AC004801.2-202ENST00000463559 283 ntBASIC3.33□□□□□ -1.88
RAB40ALP0C0E4 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC3.33□□□□□ -1.88
RAB40ALP0C0E4 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.33□□□□□ -1.88
RAB40ALP0C0E4 AC026427.2-201ENST00000506228 536 ntBASIC3.33□□□□□ -1.88
RAB40ALP0C0E4 ARL2BPP6-201ENST00000512757 439 ntBASIC3.33□□□□□ -1.88
RAB40ALP0C0E4 SNORA74D-201ENST00000516404 141 ntBASIC3.33□□□□□ -1.88
RAB40ALP0C0E4 RN7SKP60-201ENST00000516985 239 ntBASIC3.33□□□□□ -1.88
RAB40ALP0C0E4 HMGN1P28-201ENST00000521340 364 ntBASIC3.33□□□□□ -1.88
RAB40ALP0C0E4 AC008489.1-201ENST00000524271 483 ntBASIC3.33□□□□□ -1.88
RAB40ALP0C0E4 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.33□□□□□ -1.88
RAB40ALP0C0E4 MIR4738-201ENST00000579134 87 ntBASIC3.33□□□□□ -1.88
RAB40ALP0C0E4 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC3.33□□□□□ -1.88
RAB40ALP0C0E4 AC011468.4-201ENST00000603942 409 ntBASIC3.33□□□□□ -1.88
RAB40ALP0C0E4 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.33□□□□□ -1.88
RAB40ALP0C0E4 AC004067.1-201ENST00000608733 700 ntBASIC3.33□□□□□ -1.88
RAB40ALP0C0E4 AC091953.5-201ENST00000622919 233 ntBASIC3.33□□□□□ -1.88
RAB40ALP0C0E4 AC112204.3-201ENST00000623822 332 ntBASIC3.33□□□□□ -1.88
RAB40ALP0C0E4 AL159972.1-201ENST00000625150 448 ntBASIC3.33□□□□□ -1.88
RAB40ALP0C0E4 AC093591.3-201ENST00000634516 308 ntBASIC3.33□□□□□ -1.88
RAB40ALP0C0E4 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RAB40ALP0C0E4 MTND5P33-201ENST00000571250 1450 ntBASIC3.33□□□□□ -1.88
RAB40ALP0C0E4 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RAB40ALP0C0E4 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RAB40ALP0C0E4 AC092326.2-201ENST00000624772 1561 ntBASIC3.33□□□□□ -1.88
RAB40ALP0C0E4 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RAB40ALP0C0E4 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
RAB40ALP0C0E4 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.32□□□□□ -1.88
RAB40ALP0C0E4 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.32□□□□□ -1.88
RAB40ALP0C0E4 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
RAB40ALP0C0E4 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RAB40ALP0C0E4 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
RAB40ALP0C0E4 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RAB40ALP0C0E4 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RAB40ALP0C0E4 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RAB40ALP0C0E4 RNU6-809P-201ENST00000384461 107 ntBASIC3.32□□□□□ -1.88
RAB40ALP0C0E4 RNU4-65P-201ENST00000410473 140 ntBASIC3.32□□□□□ -1.88
RAB40ALP0C0E4 RPL7P8-201ENST00000411964 730 ntBASIC3.32□□□□□ -1.88
RAB40ALP0C0E4 MTND1P21-201ENST00000412991 285 ntBASIC3.32□□□□□ -1.88
RAB40ALP0C0E4 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.32□□□□□ -1.88
RAB40ALP0C0E4 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.32□□□□□ -1.88
RAB40ALP0C0E4 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC3.32□□□□□ -1.88
RAB40ALP0C0E4 AC233728.2-201ENST00000425348 757 ntBASIC3.32□□□□□ -1.88
RAB40ALP0C0E4 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.32□□□□□ -1.88
RAB40ALP0C0E4 AC109583.1-201ENST00000432156 268 ntBASIC3.32□□□□□ -1.88
RAB40ALP0C0E4 NDUFB1P1-201ENST00000435191 180 ntBASIC3.32□□□□□ -1.88
RAB40ALP0C0E4 GDI2P2-201ENST00000445131 608 ntBASIC3.32□□□□□ -1.88
RAB40ALP0C0E4 TPT1P14-201ENST00000448018 505 ntBASIC3.32□□□□□ -1.88
RAB40ALP0C0E4 MTCO1P42-201ENST00000457379 726 ntBASIC3.32□□□□□ -1.88
RAB40ALP0C0E4 U3.44-201ENST00000458938 192 ntBASIC3.32□□□□□ -1.88
RAB40ALP0C0E4 SETP11-201ENST00000473027 690 ntBASIC3.32□□□□□ -1.88
RAB40ALP0C0E4 MTND3P7-201ENST00000474435 343 ntBASIC3.32□□□□□ -1.88
RAB40ALP0C0E4 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.32□□□□□ -1.88
RAB40ALP0C0E4 AC087373.1-201ENST00000524920 491 ntBASIC3.32□□□□□ -1.88
RAB40ALP0C0E4 MTND4LP18-201ENST00000526864 291 ntBASIC3.32□□□□□ -1.88
RAB40ALP0C0E4 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.32□□□□□ -1.88
RAB40ALP0C0E4 AL133271.1-201ENST00000538229 291 ntBASIC3.32□□□□□ -1.88
RAB40ALP0C0E4 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.32□□□□□ -1.88
RAB40ALP0C0E4 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.32□□□□□ -1.88
RAB40ALP0C0E4 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.32□□□□□ -1.88
RAB40ALP0C0E4 AC091489.2-201ENST00000566263 604 ntBASIC3.32□□□□□ -1.88
RAB40ALP0C0E4 ROCK1P1-201ENST00000573767 549 ntBASIC3.32□□□□□ -1.88
RAB40ALP0C0E4 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.32□□□□□ -1.88
RAB40ALP0C0E4 AC106900.2-201ENST00000604994 317 ntBASIC3.32□□□□□ -1.88
RAB40ALP0C0E4 AC092354.1-201ENST00000606057 376 ntBASIC3.32□□□□□ -1.88
RAB40ALP0C0E4 AP002826.1-201ENST00000608835 315 ntBASIC3.32□□□□□ -1.88
RAB40ALP0C0E4 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.32□□□□□ -1.88
RAB40ALP0C0E4 AC022079.1-201ENST00000621546 602 ntBASIC3.32□□□□□ -1.88
RAB40ALP0C0E4 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.32□□□□□ -1.88
RAB40ALP0C0E4 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.32□□□□□ -1.88
RAB40ALP0C0E4 MFSD8-236ENST00000641509 4050 ntBASIC3.32□□□□□ -1.88
RAB40ALP0C0E4 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
RAB40ALP0C0E4 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
RAB40ALP0C0E4 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RAB40ALP0C0E4 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
RAB40ALP0C0E4 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RAB40ALP0C0E4 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RAB40ALP0C0E4 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
RAB40ALP0C0E4 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
RAB40ALP0C0E4 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.31□□□□□ -1.88
RAB40ALP0C0E4 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RAB40ALP0C0E4 DEFB108F-201ENST00000344638 222 ntBASIC3.31□□□□□ -1.88
RAB40ALP0C0E4 RNU4-35P-201ENST00000362588 141 ntBASIC3.31□□□□□ -1.88
RAB40ALP0C0E4 RNU5E-8P-201ENST00000363502 116 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms