Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 AL022578.1-201ENST00000439330 1433 ntBASIC3.38□□□□□ -1.87
CD48P09326 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
CD48P09326 RNU1-33P-201ENST00000364249 162 ntBASIC3.38□□□□□ -1.87
CD48P09326 RNU6-777P-201ENST00000364265 104 ntBASIC3.38□□□□□ -1.87
CD48P09326 RNU5E-5P-201ENST00000365379 116 ntBASIC3.38□□□□□ -1.87
CD48P09326 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
CD48P09326 Y_RNA.517-201ENST00000384551 106 ntBASIC3.38□□□□□ -1.87
CD48P09326 MTCYBP36-201ENST00000404146 440 ntBASIC3.38□□□□□ -1.87
CD48P09326 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.38□□□□□ -1.87
CD48P09326 AF274854.1-201ENST00000413236 615 ntBASIC3.38□□□□□ -1.87
CD48P09326 MTCO1P21-201ENST00000416634 589 ntBASIC3.38□□□□□ -1.87
CD48P09326 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.38□□□□□ -1.87
CD48P09326 AL159987.2-201ENST00000432754 307 ntBASIC3.38□□□□□ -1.87
CD48P09326 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CD48P09326 AL358232.1-201ENST00000448030 501 ntBASIC3.38□□□□□ -1.87
CD48P09326 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.38□□□□□ -1.87
CD48P09326 HMGB3P21-201ENST00000452483 547 ntBASIC3.38□□□□□ -1.87
CD48P09326 PABPC1P3-201ENST00000469174 459 ntBASIC3.38□□□□□ -1.87
CD48P09326 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.38□□□□□ -1.87
CD48P09326 AC011825.1-201ENST00000484967 388 ntBASIC3.38□□□□□ -1.87
CD48P09326 FAM172BP-201ENST00000487497 1089 ntBASIC3.38□□□□□ -1.87
CD48P09326 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.38□□□□□ -1.87
CD48P09326 AC010625.1-201ENST00000511296 403 ntBASIC3.38□□□□□ -1.87
CD48P09326 AC024589.1-201ENST00000512207 263 ntBASIC3.38□□□□□ -1.87
CD48P09326 MTND1P5-201ENST00000517906 940 ntBASIC3.38□□□□□ -1.87
CD48P09326 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.38□□□□□ -1.87
CD48P09326 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.38□□□□□ -1.87
CD48P09326 OR6C73P-201ENST00000546432 358 ntBASIC3.38□□□□□ -1.87
CD48P09326 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.38□□□□□ -1.87
CD48P09326 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.38□□□□□ -1.87
CD48P09326 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.38□□□□□ -1.87
CD48P09326 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.38□□□□□ -1.87
CD48P09326 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.38□□□□□ -1.87
CD48P09326 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.38□□□□□ -1.87
CD48P09326 DEFB131E-202ENST00000602581 683 ntBASIC3.38□□□□□ -1.87
CD48P09326 PRELID3BP8-201ENST00000604148 295 ntBASIC3.38□□□□□ -1.87
CD48P09326 AC027807.2-201ENST00000616099 408 ntBASIC3.38□□□□□ -1.87
CD48P09326 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.38□□□□□ -1.87
CD48P09326 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.38□□□□□ -1.87
CD48P09326 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.38□□□□□ -1.87
CD48P09326 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CD48P09326 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.38□□□□□ -1.87
CD48P09326 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CD48P09326 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CD48P09326 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
CD48P09326 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CD48P09326 AC097714.1-201ENST00000511272 1647 ntBASIC3.37□□□□□ -1.87
CD48P09326 USP8P1-201ENST00000494673 3183 ntBASIC3.37□□□□□ -1.87
CD48P09326 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
CD48P09326 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CD48P09326 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.37□□□□□ -1.87
CD48P09326 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
CD48P09326 SNORD56.3-201ENST00000363507 71 ntBASIC3.37□□□□□ -1.87
CD48P09326 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.37□□□□□ -1.87
CD48P09326 RNU6-348P-201ENST00000384386 107 ntBASIC3.37□□□□□ -1.87
CD48P09326 RNU6-769P-201ENST00000384407 104 ntBASIC3.37□□□□□ -1.87
CD48P09326 AC109780.2-201ENST00000413467 845 ntBASIC3.37□□□□□ -1.87
CD48P09326 HMGB3P23-201ENST00000414981 585 ntBASIC3.37□□□□□ -1.87
CD48P09326 MTCO2P5-201ENST00000422621 426 ntBASIC3.37□□□□□ -1.87
CD48P09326 AC012498.1-201ENST00000424037 437 ntBASIC3.37□□□□□ -1.87
CD48P09326 AL445669.1-201ENST00000426743 755 ntBASIC3.37□□□□□ -1.87
CD48P09326 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.37□□□□□ -1.87
CD48P09326 AL031667.1-201ENST00000440222 725 ntBASIC3.37□□□□□ -1.87
CD48P09326 AC115115.1-201ENST00000449927 248 ntBASIC3.37□□□□□ -1.87
CD48P09326 TPT1P7-201ENST00000458300 517 ntBASIC3.37□□□□□ -1.87
CD48P09326 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CD48P09326 AL136126.1-201ENST00000473603 402 ntBASIC3.37□□□□□ -1.87
CD48P09326 AP000926.1-201ENST00000479573 241 ntBASIC3.37□□□□□ -1.87
CD48P09326 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.37□□□□□ -1.87
CD48P09326 AC096751.1-202ENST00000502691 1067 ntBASIC3.37□□□□□ -1.87
CD48P09326 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CD48P09326 SNORA64.4-201ENST00000516632 81 ntBASIC3.37□□□□□ -1.87
CD48P09326 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CD48P09326 AC022861.1-201ENST00000522981 663 ntBASIC3.37□□□□□ -1.87
CD48P09326 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.37□□□□□ -1.87
CD48P09326 AC092470.1-201ENST00000546187 132 ntBASIC3.37□□□□□ -1.87
CD48P09326 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.37□□□□□ -1.87
CD48P09326 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.37□□□□□ -1.87
CD48P09326 AP001094.1-201ENST00000579805 193 ntBASIC3.37□□□□□ -1.87
CD48P09326 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.37□□□□□ -1.87
CD48P09326 MIR548AB-201ENST00000584917 84 ntBASIC3.37□□□□□ -1.87
CD48P09326 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.37□□□□□ -1.87
CD48P09326 AP003465.2-201ENST00000602571 373 ntBASIC3.37□□□□□ -1.87
CD48P09326 AC073648.5-201ENST00000603502 305 ntBASIC3.37□□□□□ -1.87
CD48P09326 AC113194.1-201ENST00000606037 500 ntBASIC3.37□□□□□ -1.87
CD48P09326 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.37□□□□□ -1.87
CD48P09326 AC005332.10-201ENST00000612725 619 ntBASIC3.37□□□□□ -1.87
CD48P09326 AC073968.1-201ENST00000618594 637 ntBASIC3.37□□□□□ -1.87
CD48P09326 AC018755.4-201ENST00000619715 454 ntBASIC3.37□□□□□ -1.87
CD48P09326 AC093591.3-201ENST00000634516 308 ntBASIC3.37□□□□□ -1.87
CD48P09326 U6.105-201ENST00000637379 88 ntBASIC3.37□□□□□ -1.87
CD48P09326 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CD48P09326 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
CD48P09326 AC092326.2-201ENST00000624772 1561 ntBASIC3.37□□□□□ -1.87
CD48P09326 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.37□□□□□ -1.87
CD48P09326 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.37□□□□□ -1.87
CD48P09326 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
CD48P09326 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.36□□□□□ -1.87
CD48P09326 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CD48P09326 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms