Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 ARPC3P5-201ENST00000448802 534 ntBASIC3.05□□□□□ -1.92
MT-ND1P03886 RAB9AP1-201ENST00000449393 573 ntBASIC3.05□□□□□ -1.92
MT-ND1P03886 AC140076.1-201ENST00000449897 361 ntBASIC3.05□□□□□ -1.92
MT-ND1P03886 AP001992.1-205ENST00000462248 379 ntBASIC3.05□□□□□ -1.92
MT-ND1P03886 RPL21P8-201ENST00000465083 535 ntBASIC3.05□□□□□ -1.92
MT-ND1P03886 SETP11-201ENST00000473027 690 ntBASIC3.05□□□□□ -1.92
MT-ND1P03886 RPL30P6-201ENST00000475925 342 ntBASIC3.05□□□□□ -1.92
MT-ND1P03886 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.05□□□□□ -1.92
MT-ND1P03886 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.05□□□□□ -1.92
MT-ND1P03886 MTND4LP22-201ENST00000508209 276 ntBASIC3.05□□□□□ -1.92
MT-ND1P03886 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.05□□□□□ -1.92
MT-ND1P03886 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC3.05□□□□□ -1.92
MT-ND1P03886 PAICSP4-201ENST00000517543 1253 ntBASIC3.05□□□□□ -1.92
MT-ND1P03886 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.05□□□□□ -1.92
MT-ND1P03886 AC022861.1-201ENST00000522981 663 ntBASIC3.05□□□□□ -1.92
MT-ND1P03886 FAM60DP-201ENST00000524174 632 ntBASIC3.05□□□□□ -1.92
MT-ND1P03886 AC087276.1-201ENST00000529659 480 ntBASIC3.05□□□□□ -1.92
MT-ND1P03886 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC3.05□□□□□ -1.92
MT-ND1P03886 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.05□□□□□ -1.92
MT-ND1P03886 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.05□□□□□ -1.92
MT-ND1P03886 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
MT-ND1P03886 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.05□□□□□ -1.92
MT-ND1P03886 AP005136.1-201ENST00000579765 429 ntBASIC3.05□□□□□ -1.92
MT-ND1P03886 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.05□□□□□ -1.92
MT-ND1P03886 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.05□□□□□ -1.92
MT-ND1P03886 AC110760.3-201ENST00000598794 467 ntBASIC3.05□□□□□ -1.92
MT-ND1P03886 AL356321.1-201ENST00000621360 228 ntBASIC3.05□□□□□ -1.92
MT-ND1P03886 AF246928.1-201ENST00000623768 87 ntBASIC3.05□□□□□ -1.92
MT-ND1P03886 AC009039.2-201ENST00000624524 529 ntBASIC3.05□□□□□ -1.92
MT-ND1P03886 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.05□□□□□ -1.92
MT-ND1P03886 CRYM-AS1-204ENST00000637983 556 ntBASIC3.05□□□□□ -1.92
MT-ND1P03886 AC099063.3-201ENST00000642066 185 ntBASIC3.05□□□□□ -1.92
MT-ND1P03886 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
MT-ND1P03886 AL161912.2-201ENST00000565707 3007 ntBASIC3.05□□□□□ -1.92
MT-ND1P03886 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
MT-ND1P03886 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
MT-ND1P03886 AC103988.1-201ENST00000566382 2177 ntBASIC3.04□□□□□ -1.92
MT-ND1P03886 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.04□□□□□ -1.92
MT-ND1P03886 MTND4P16-201ENST00000466108 1367 ntBASIC3.04□□□□□ -1.92
MT-ND1P03886 ANKRD20A17P-201ENST00000511745 1330 ntBASIC3.04□□□□□ -1.92
MT-ND1P03886 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.04□□□□□ -1.92
MT-ND1P03886 Y_RNA.18-201ENST00000362461 102 ntBASIC3.04□□□□□ -1.92
MT-ND1P03886 RNA5SP124-201ENST00000362739 110 ntBASIC3.04□□□□□ -1.92
MT-ND1P03886 RNU4-40P-201ENST00000364351 143 ntBASIC3.04□□□□□ -1.92
MT-ND1P03886 RNA5SP479-201ENST00000364858 117 ntBASIC3.04□□□□□ -1.92
MT-ND1P03886 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.04□□□□□ -1.92
MT-ND1P03886 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
MT-ND1P03886 Y_RNA.548-201ENST00000384656 105 ntBASIC3.04□□□□□ -1.92
MT-ND1P03886 MIR493-201ENST00000385254 89 ntBASIC3.04□□□□□ -1.92
MT-ND1P03886 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
MT-ND1P03886 RPS4XP3-201ENST00000398541 413 ntBASIC3.04□□□□□ -1.92
MT-ND1P03886 AL031679.1-201ENST00000400616 525 ntBASIC3.04□□□□□ -1.92
MT-ND1P03886 AL031577.2-201ENST00000404133 280 ntBASIC3.04□□□□□ -1.92
MT-ND1P03886 AL445189.1-201ENST00000405722 338 ntBASIC3.04□□□□□ -1.92
MT-ND1P03886 AC245054.2-201ENST00000415639 319 ntBASIC3.04□□□□□ -1.92
MT-ND1P03886 MRPL50P2-201ENST00000416821 482 ntBASIC3.04□□□□□ -1.92
MT-ND1P03886 MTATP6P27-201ENST00000416987 621 ntBASIC3.04□□□□□ -1.92
MT-ND1P03886 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.04□□□□□ -1.92
MT-ND1P03886 HSPE1P1-201ENST00000421494 318 ntBASIC3.04□□□□□ -1.92
MT-ND1P03886 TMEM167AP1-201ENST00000423409 219 ntBASIC3.04□□□□□ -1.92
MT-ND1P03886 AC073063.1-201ENST00000434352 607 ntBASIC3.04□□□□□ -1.92
MT-ND1P03886 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.04□□□□□ -1.92
MT-ND1P03886 LSM1P1-201ENST00000438629 273 ntBASIC3.04□□□□□ -1.92
MT-ND1P03886 AC009969.1-201ENST00000438726 172 ntBASIC3.04□□□□□ -1.92
MT-ND1P03886 AC092641.1-201ENST00000440229 772 ntBASIC3.04□□□□□ -1.92
MT-ND1P03886 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC3.04□□□□□ -1.92
MT-ND1P03886 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.04□□□□□ -1.92
MT-ND1P03886 RAC1P7-201ENST00000445367 377 ntBASIC3.04□□□□□ -1.92
MT-ND1P03886 AC002381.1-201ENST00000447049 280 ntBASIC3.04□□□□□ -1.92
MT-ND1P03886 AL590664.1-201ENST00000448065 339 ntBASIC3.04□□□□□ -1.92
MT-ND1P03886 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.04□□□□□ -1.92
MT-ND1P03886 RPL30P14-201ENST00000482744 348 ntBASIC3.04□□□□□ -1.92
MT-ND1P03886 OR2A20P-203ENST00000498397 1268 ntBASIC3.04□□□□□ -1.92
MT-ND1P03886 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.04□□□□□ -1.92
MT-ND1P03886 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.04□□□□□ -1.92
MT-ND1P03886 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.04□□□□□ -1.92
MT-ND1P03886 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
MT-ND1P03886 AC010265.1-201ENST00000513509 211 ntBASIC3.04□□□□□ -1.92
MT-ND1P03886 AC093677.1-201ENST00000514414 678 ntBASIC3.04□□□□□ -1.92
MT-ND1P03886 IGKV2-26-201ENST00000518305 343 ntBASIC3.04□□□□□ -1.92
MT-ND1P03886 COX6CP8-201ENST00000522620 226 ntBASIC3.04□□□□□ -1.92
MT-ND1P03886 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
MT-ND1P03886 AC055876.1-202ENST00000567053 138 ntBASIC3.04□□□□□ -1.92
MT-ND1P03886 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.04□□□□□ -1.92
MT-ND1P03886 Z94722.1-201ENST00000604328 474 ntBASIC3.04□□□□□ -1.92
MT-ND1P03886 AL162713.1-201ENST00000604480 262 ntBASIC3.04□□□□□ -1.92
MT-ND1P03886 AL390208.1-201ENST00000605885 644 ntBASIC3.04□□□□□ -1.92
MT-ND1P03886 TUG1_1.1-201ENST00000610654 145 ntBASIC3.04□□□□□ -1.92
MT-ND1P03886 AL591516.1-201ENST00000611326 274 ntBASIC3.04□□□□□ -1.92
MT-ND1P03886 AL445264.1-201ENST00000621719 171 ntBASIC3.04□□□□□ -1.92
MT-ND1P03886 AC243312.2-201ENST00000623340 601 ntBASIC3.04□□□□□ -1.92
MT-ND1P03886 AC091965.5-201ENST00000624785 342 ntBASIC3.04□□□□□ -1.92
MT-ND1P03886 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
MT-ND1P03886 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
MT-ND1P03886 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.04□□□□□ -1.92
MT-ND1P03886 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.03□□□□□ -1.92
MT-ND1P03886 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
MT-ND1P03886 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
MT-ND1P03886 RNU4-35P-201ENST00000362588 141 ntBASIC3.03□□□□□ -1.92
MT-ND1P03886 SNORA46-201ENST00000384762 135 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms