Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC3.13□□□□□ -1.91
CHRNA1P02708 COX7A2P2-201ENST00000505291 250 ntBASIC3.13□□□□□ -1.91
CHRNA1P02708 AC113420.1-201ENST00000507903 571 ntBASIC3.13□□□□□ -1.91
CHRNA1P02708 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.13□□□□□ -1.91
CHRNA1P02708 SNORA31.1-201ENST00000515993 133 ntBASIC3.13□□□□□ -1.91
CHRNA1P02708 SNORA31.5-201ENST00000516190 133 ntBASIC3.13□□□□□ -1.91
CHRNA1P02708 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.13□□□□□ -1.91
CHRNA1P02708 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.13□□□□□ -1.91
CHRNA1P02708 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.13□□□□□ -1.91
CHRNA1P02708 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.13□□□□□ -1.91
CHRNA1P02708 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.13□□□□□ -1.91
CHRNA1P02708 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CHRNA1P02708 MAGOH2P-202ENST00000584384 429 ntBASIC3.13□□□□□ -1.91
CHRNA1P02708 MIR4506-201ENST00000584693 77 ntBASIC3.13□□□□□ -1.91
CHRNA1P02708 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.13□□□□□ -1.91
CHRNA1P02708 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.13□□□□□ -1.91
CHRNA1P02708 AC009220.3-201ENST00000604318 586 ntBASIC3.13□□□□□ -1.91
CHRNA1P02708 AC024933.1-201ENST00000608472 348 ntBASIC3.13□□□□□ -1.91
CHRNA1P02708 AL157392.4-201ENST00000609756 345 ntBASIC3.13□□□□□ -1.91
CHRNA1P02708 AC022509.4-201ENST00000621404 572 ntBASIC3.13□□□□□ -1.91
CHRNA1P02708 CRYM-AS1-204ENST00000637983 556 ntBASIC3.13□□□□□ -1.91
CHRNA1P02708 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
CHRNA1P02708 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CHRNA1P02708 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CHRNA1P02708 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CHRNA1P02708 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
CHRNA1P02708 OR4G11P-202ENST00000642116 1414 ntBASIC3.12□□□□□ -1.91
CHRNA1P02708 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CHRNA1P02708 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CHRNA1P02708 RNU1-112P-201ENST00000364401 164 ntBASIC3.12□□□□□ -1.91
CHRNA1P02708 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.12□□□□□ -1.91
CHRNA1P02708 MIR887-201ENST00000401258 79 ntBASIC3.12□□□□□ -1.91
CHRNA1P02708 AL161449.1-201ENST00000414531 1199 ntBASIC3.12□□□□□ -1.91
CHRNA1P02708 MTATP6P27-201ENST00000416987 621 ntBASIC3.12□□□□□ -1.91
CHRNA1P02708 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CHRNA1P02708 MTND2P5-201ENST00000432656 1006 ntBASIC3.12□□□□□ -1.91
CHRNA1P02708 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.12□□□□□ -1.91
CHRNA1P02708 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.12□□□□□ -1.91
CHRNA1P02708 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.12□□□□□ -1.91
CHRNA1P02708 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.12□□□□□ -1.91
CHRNA1P02708 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.12□□□□□ -1.91
CHRNA1P02708 AL590639.1-201ENST00000456484 337 ntBASIC3.12□□□□□ -1.91
CHRNA1P02708 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.12□□□□□ -1.91
CHRNA1P02708 RPL21P131-201ENST00000497298 483 ntBASIC3.12□□□□□ -1.91
CHRNA1P02708 AC114981.1-201ENST00000503897 678 ntBASIC3.12□□□□□ -1.91
CHRNA1P02708 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
CHRNA1P02708 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.12□□□□□ -1.91
CHRNA1P02708 ERHP1-201ENST00000523006 310 ntBASIC3.12□□□□□ -1.91
CHRNA1P02708 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC3.12□□□□□ -1.91
CHRNA1P02708 SLC2A13P1-201ENST00000531560 322 ntBASIC3.12□□□□□ -1.91
CHRNA1P02708 AC006213.4-201ENST00000616184 634 ntBASIC3.12□□□□□ -1.91
CHRNA1P02708 AC073348.1-201ENST00000623002 331 ntBASIC3.12□□□□□ -1.91
CHRNA1P02708 AC004009.2-201ENST00000623016 728 ntBASIC3.12□□□□□ -1.91
CHRNA1P02708 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.12□□□□□ -1.91
CHRNA1P02708 AP003122.6-201ENST00000623831 495 ntBASIC3.12□□□□□ -1.91
CHRNA1P02708 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.11□□□□□ -1.91
CHRNA1P02708 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.11□□□□□ -1.91
CHRNA1P02708 AC008264.2-201ENST00000610193 3731 ntBASIC3.11□□□□□ -1.91
CHRNA1P02708 FTLP6-201ENST00000355274 422 ntBASIC3.11□□□□□ -1.91
CHRNA1P02708 RNU4-82P-201ENST00000362443 140 ntBASIC3.11□□□□□ -1.91
CHRNA1P02708 AL031679.1-201ENST00000400616 525 ntBASIC3.11□□□□□ -1.91
CHRNA1P02708 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CHRNA1P02708 RPL7P10-201ENST00000417407 739 ntBASIC3.11□□□□□ -1.91
CHRNA1P02708 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC3.11□□□□□ -1.91
CHRNA1P02708 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.11□□□□□ -1.91
CHRNA1P02708 MTCO2P23-201ENST00000425216 680 ntBASIC3.11□□□□□ -1.91
CHRNA1P02708 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC3.11□□□□□ -1.91
CHRNA1P02708 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.11□□□□□ -1.91
CHRNA1P02708 AC004866.2-201ENST00000438285 481 ntBASIC3.11□□□□□ -1.91
CHRNA1P02708 MTND4P6-201ENST00000438297 472 ntBASIC3.11□□□□□ -1.91
CHRNA1P02708 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
CHRNA1P02708 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.11□□□□□ -1.91
CHRNA1P02708 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC3.11□□□□□ -1.91
CHRNA1P02708 TPT1P8-201ENST00000510120 555 ntBASIC3.11□□□□□ -1.91
CHRNA1P02708 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.11□□□□□ -1.91
CHRNA1P02708 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC3.11□□□□□ -1.91
CHRNA1P02708 RNU6-56P-201ENST00000516986 93 ntBASIC3.11□□□□□ -1.91
CHRNA1P02708 AC104986.1-201ENST00000517978 436 ntBASIC3.11□□□□□ -1.91
CHRNA1P02708 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CHRNA1P02708 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.11□□□□□ -1.91
CHRNA1P02708 SETP7-201ENST00000552169 453 ntBASIC3.11□□□□□ -1.91
CHRNA1P02708 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.11□□□□□ -1.91
CHRNA1P02708 HIGD1AP17-201ENST00000554576 276 ntBASIC3.11□□□□□ -1.91
CHRNA1P02708 HSPE1P3-201ENST00000559254 309 ntBASIC3.11□□□□□ -1.91
CHRNA1P02708 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.11□□□□□ -1.91
CHRNA1P02708 COX6CP3-201ENST00000580869 223 ntBASIC3.11□□□□□ -1.91
CHRNA1P02708 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.11□□□□□ -1.91
CHRNA1P02708 VN1R83P-201ENST00000595685 445 ntBASIC3.11□□□□□ -1.91
CHRNA1P02708 AC004987.4-201ENST00000603383 338 ntBASIC3.11□□□□□ -1.91
CHRNA1P02708 AC011458.1-201ENST00000604034 617 ntBASIC3.11□□□□□ -1.91
CHRNA1P02708 AC106791.2-201ENST00000604680 391 ntBASIC3.11□□□□□ -1.91
CHRNA1P02708 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.11□□□□□ -1.91
CHRNA1P02708 AC016597.2-201ENST00000613256 341 ntBASIC3.11□□□□□ -1.91
CHRNA1P02708 AC243773.3-201ENST00000613270 256 ntBASIC3.11□□□□□ -1.91
CHRNA1P02708 AC023158.2-201ENST00000614876 543 ntBASIC3.11□□□□□ -1.91
CHRNA1P02708 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.11□□□□□ -1.91
CHRNA1P02708 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CHRNA1P02708 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CHRNA1P02708 AC109315.1-201ENST00000584143 1347 ntBASIC3.11□□□□□ -1.91
CHRNA1P02708 AC097714.1-201ENST00000511272 1647 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 148.2 ms