Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 Y_RNA.540-201ENST00000384638 111 ntBASIC2.86□□□□□ -1.95
NPHP4O75161 MIR7-2-201ENST00000384970 110 ntBASIC2.86□□□□□ -1.95
NPHP4O75161 MTND2P16-201ENST00000419987 799 ntBASIC2.86□□□□□ -1.95
NPHP4O75161 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC2.86□□□□□ -1.95
NPHP4O75161 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.86□□□□□ -1.95
NPHP4O75161 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC2.86□□□□□ -1.95
NPHP4O75161 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC2.86□□□□□ -1.95
NPHP4O75161 AF279873.1-201ENST00000523393 313 ntBASIC2.86□□□□□ -1.95
NPHP4O75161 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC2.86□□□□□ -1.95
NPHP4O75161 AC079791.1-201ENST00000605356 973 ntBASIC2.86□□□□□ -1.95
NPHP4O75161 HSPE1P14-201ENST00000605812 302 ntBASIC2.86□□□□□ -1.95
NPHP4O75161 AC017104.5-201ENST00000637647 639 ntBASIC2.86□□□□□ -1.95
NPHP4O75161 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.86□□□□□ -1.95
NPHP4O75161 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.86□□□□□ -1.95
NPHP4O75161 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC2.86□□□□□ -1.95
NPHP4O75161 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
NPHP4O75161 MTCO1P18-201ENST00000455518 1419 ntBASIC2.86□□□□□ -1.95
NPHP4O75161 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
NPHP4O75161 RNU6-629P-201ENST00000384061 103 ntBASIC2.85□□□□□ -1.95
NPHP4O75161 MIR591-201ENST00000385290 95 ntBASIC2.85□□□□□ -1.95
NPHP4O75161 MTND3P20-201ENST00000407663 186 ntBASIC2.85□□□□□ -1.95
NPHP4O75161 TATDN1P1-201ENST00000414123 891 ntBASIC2.85□□□□□ -1.95
NPHP4O75161 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.85□□□□□ -1.95
NPHP4O75161 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC2.85□□□□□ -1.95
NPHP4O75161 TRIM60P18-201ENST00000441518 828 ntBASIC2.85□□□□□ -1.95
NPHP4O75161 AC015724.1-201ENST00000478577 156 ntBASIC2.85□□□□□ -1.95
NPHP4O75161 AC004263.1-201ENST00000479327 332 ntBASIC2.85□□□□□ -1.95
NPHP4O75161 AC087190.1-201ENST00000484462 480 ntBASIC2.85□□□□□ -1.95
NPHP4O75161 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC2.85□□□□□ -1.95
NPHP4O75161 MLLT10P2-201ENST00000506434 249 ntBASIC2.85□□□□□ -1.95
NPHP4O75161 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC2.85□□□□□ -1.95
NPHP4O75161 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.85□□□□□ -1.95
NPHP4O75161 ISCA1P3-201ENST00000577104 373 ntBASIC2.85□□□□□ -1.95
NPHP4O75161 AC060766.3-201ENST00000591442 263 ntBASIC2.85□□□□□ -1.95
NPHP4O75161 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC2.85□□□□□ -1.95
NPHP4O75161 AC020658.4-201ENST00000613987 684 ntBASIC2.85□□□□□ -1.95
NPHP4O75161 AC244517.12-201ENST00000623581 663 ntBASIC2.85□□□□□ -1.95
NPHP4O75161 AP003400.6-201ENST00000624698 740 ntBASIC2.85□□□□□ -1.95
NPHP4O75161 AL512283.1-201ENST00000606756 1384 ntBASIC2.85□□□□□ -1.95
NPHP4O75161 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.85□□□□□ -1.95
NPHP4O75161 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
NPHP4O75161 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.85□□□□□ -1.95
NPHP4O75161 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.85□□□□□ -1.95
NPHP4O75161 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.85□□□□□ -1.95
NPHP4O75161 API5P2-201ENST00000397055 1498 ntBASIC2.85□□□□□ -1.95
NPHP4O75161 RNU6-263P-201ENST00000363811 107 ntBASIC2.85□□□□□ -1.95
NPHP4O75161 RNU6-272P-201ENST00000411028 104 ntBASIC2.85□□□□□ -1.95
NPHP4O75161 AL445685.2-201ENST00000422551 342 ntBASIC2.85□□□□□ -1.95
NPHP4O75161 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC2.85□□□□□ -1.95
NPHP4O75161 RSL24D1P8-201ENST00000434442 492 ntBASIC2.85□□□□□ -1.95
NPHP4O75161 AL035407.2-201ENST00000454090 378 ntBASIC2.85□□□□□ -1.95
NPHP4O75161 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.85□□□□□ -1.95
NPHP4O75161 HESX1-202ENST00000473921 757 ntTSL 5 BASIC2.85□□□□□ -1.95
NPHP4O75161 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC2.85□□□□□ -1.95
NPHP4O75161 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC2.85□□□□□ -1.95
NPHP4O75161 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC2.85□□□□□ -1.95
NPHP4O75161 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC2.85□□□□□ -1.95
NPHP4O75161 SUB1P3-201ENST00000564581 315 ntBASIC2.85□□□□□ -1.95
NPHP4O75161 AC010546.1-201ENST00000569391 485 ntBASIC2.85□□□□□ -1.95
NPHP4O75161 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC2.85□□□□□ -1.95
NPHP4O75161 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC2.85□□□□□ -1.95
NPHP4O75161 OR4G1P-201ENST00000588632 938 ntBASIC2.85□□□□□ -1.95
NPHP4O75161 AC040174.2-201ENST00000602701 465 ntBASIC2.85□□□□□ -1.95
NPHP4O75161 AL009028.1-201ENST00000604895 802 ntBASIC2.85□□□□□ -1.95
NPHP4O75161 AC090425.2-201ENST00000608818 501 ntBASIC2.85□□□□□ -1.95
NPHP4O75161 AL163051.2-201ENST00000618976 735 ntBASIC2.85□□□□□ -1.95
NPHP4O75161 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC2.85□□□□□ -1.95
NPHP4O75161 AL109659.3-201ENST00000624985 950 ntBASIC2.85□□□□□ -1.95
NPHP4O75161 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.84□□□□□ -1.95
NPHP4O75161 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
NPHP4O75161 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
NPHP4O75161 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
NPHP4O75161 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
NPHP4O75161 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
NPHP4O75161 AL627390.1-201ENST00000396055 340 ntBASIC2.84□□□□□ -1.96
NPHP4O75161 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC2.84□□□□□ -1.96
NPHP4O75161 AC008173.1-201ENST00000418901 264 ntBASIC2.84□□□□□ -1.96
NPHP4O75161 AC005005.2-201ENST00000420779 380 ntBASIC2.84□□□□□ -1.96
NPHP4O75161 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC2.84□□□□□ -1.96
NPHP4O75161 MTND1P33-201ENST00000446251 917 ntBASIC2.84□□□□□ -1.96
NPHP4O75161 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC2.84□□□□□ -1.96
NPHP4O75161 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC2.84□□□□□ -1.96
NPHP4O75161 MTCYBP41-201ENST00000528913 1123 ntBASIC2.84□□□□□ -1.96
NPHP4O75161 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC2.84□□□□□ -1.96
NPHP4O75161 SYF2P1-201ENST00000550658 413 ntBASIC2.84□□□□□ -1.96
NPHP4O75161 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC2.84□□□□□ -1.96
NPHP4O75161 OR4H6P-202ENST00000603819 340 ntBASIC2.84□□□□□ -1.96
NPHP4O75161 AP001033.2-201ENST00000609701 1003 ntBASIC2.84□□□□□ -1.96
NPHP4O75161 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC2.84□□□□□ -1.96
NPHP4O75161 AC005156.1-201ENST00000613371 573 ntBASIC2.84□□□□□ -1.96
NPHP4O75161 AC003001.2-201ENST00000616294 831 ntBASIC2.84□□□□□ -1.96
NPHP4O75161 AC073569.3-201ENST00000619055 682 ntBASIC2.84□□□□□ -1.96
NPHP4O75161 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.84□□□□□ -1.96
NPHP4O75161 MTND5P11-201ENST00000511037 1812 ntBASIC2.83□□□□□ -1.96
NPHP4O75161 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
NPHP4O75161 RNU6-1339P-201ENST00000363574 91 ntBASIC2.83□□□□□ -1.96
NPHP4O75161 AL138880.1-201ENST00000405824 642 ntBASIC2.83□□□□□ -1.96
NPHP4O75161 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.83□□□□□ -1.96
NPHP4O75161 AC092473.1-201ENST00000441098 221 ntBASIC2.83□□□□□ -1.96
NPHP4O75161 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms