Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 AC234779.1-201ENST00000425910 285 ntBASIC4.61□□□□□ -1.67
TRIM13O60858 RSL24D1P6-201ENST00000426934 401 ntBASIC4.61□□□□□ -1.67
TRIM13O60858 OR2AS1P-201ENST00000427827 319 ntBASIC4.61□□□□□ -1.67
TRIM13O60858 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.61□□□□□ -1.67
TRIM13O60858 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.61□□□□□ -1.67
TRIM13O60858 AC020550.1-201ENST00000447385 163 ntBASIC4.61□□□□□ -1.67
TRIM13O60858 NANOGP10-201ENST00000453325 895 ntBASIC4.61□□□□□ -1.67
TRIM13O60858 RNU7-182P-201ENST00000459009 62 ntBASIC4.61□□□□□ -1.67
TRIM13O60858 PABPC1P3-201ENST00000469174 459 ntBASIC4.61□□□□□ -1.67
TRIM13O60858 AC022795.1-201ENST00000473808 480 ntBASIC4.61□□□□□ -1.67
TRIM13O60858 AC087879.1-201ENST00000474343 374 ntBASIC4.61□□□□□ -1.67
TRIM13O60858 RPL30P11-201ENST00000495304 339 ntBASIC4.61□□□□□ -1.67
TRIM13O60858 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM13O60858 AC090136.1-201ENST00000520009 240 ntBASIC4.61□□□□□ -1.67
TRIM13O60858 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC4.61□□□□□ -1.67
TRIM13O60858 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM13O60858 RRN3P3-201ENST00000549207 578 ntBASIC4.61□□□□□ -1.67
TRIM13O60858 LARP7P2-201ENST00000575306 125 ntBASIC4.61□□□□□ -1.67
TRIM13O60858 AC138761.3-201ENST00000579993 334 ntBASIC4.61□□□□□ -1.67
TRIM13O60858 MIR4775-201ENST00000581168 75 ntBASIC4.61□□□□□ -1.67
TRIM13O60858 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4.61□□□□□ -1.67
TRIM13O60858 AL353997.4-201ENST00000586196 166 ntBASIC4.61□□□□□ -1.67
TRIM13O60858 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.61□□□□□ -1.67
TRIM13O60858 AC104662.1-201ENST00000604448 511 ntBASIC4.61□□□□□ -1.67
TRIM13O60858 Z82243.1-201ENST00000609432 473 ntBASIC4.61□□□□□ -1.67
TRIM13O60858 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.61□□□□□ -1.67
TRIM13O60858 uc_338.34-201ENST00000617467 174 ntBASIC4.61□□□□□ -1.67
TRIM13O60858 AC092608.2-201ENST00000624427 218 ntBASIC4.61□□□□□ -1.67
TRIM13O60858 UOX-205ENST00000640983 544 ntTSL 4 BASIC4.61□□□□□ -1.67
TRIM13O60858 AL596275.2-204ENST00000641628 552 ntBASIC4.61□□□□□ -1.67
TRIM13O60858 AL596275.2-206ENST00000641957 626 ntBASIC4.61□□□□□ -1.67
TRIM13O60858 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM13O60858 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
TRIM13O60858 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM13O60858 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM13O60858 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM13O60858 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM13O60858 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.6□□□□□ -1.67
TRIM13O60858 PABPC1P6-201ENST00000445594 1829 ntBASIC4.6□□□□□ -1.67
TRIM13O60858 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.6□□□□□ -1.67
TRIM13O60858 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM13O60858 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM13O60858 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM13O60858 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.6□□□□□ -1.67
TRIM13O60858 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
TRIM13O60858 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM13O60858 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM13O60858 Y_RNA.350-201ENST00000365409 98 ntBASIC4.6□□□□□ -1.67
TRIM13O60858 RNU6-472P-201ENST00000384299 107 ntBASIC4.6□□□□□ -1.67
TRIM13O60858 RNU6-328P-201ENST00000390887 106 ntBASIC4.6□□□□□ -1.67
TRIM13O60858 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM13O60858 UBE2V1P2-201ENST00000397758 440 ntBASIC4.6□□□□□ -1.67
TRIM13O60858 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.6□□□□□ -1.67
TRIM13O60858 RNA5SP146-201ENST00000410743 123 ntBASIC4.6□□□□□ -1.67
TRIM13O60858 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC4.6□□□□□ -1.67
TRIM13O60858 AC012065.2-201ENST00000421295 375 ntBASIC4.6□□□□□ -1.67
TRIM13O60858 PDSS1P1-201ENST00000422953 1114 ntBASIC4.6□□□□□ -1.67
TRIM13O60858 HMGB1P9-201ENST00000429856 646 ntBASIC4.6□□□□□ -1.67
TRIM13O60858 AC239809.1-201ENST00000450470 217 ntBASIC4.6□□□□□ -1.67
TRIM13O60858 COPS8P2-201ENST00000473228 627 ntBASIC4.6□□□□□ -1.67
TRIM13O60858 RN7SL30P-201ENST00000488416 306 ntBASIC4.6□□□□□ -1.67
TRIM13O60858 RPS4XP14-201ENST00000493072 781 ntBASIC4.6□□□□□ -1.67
TRIM13O60858 AC005726.1-201ENST00000494679 427 ntBASIC4.6□□□□□ -1.67
TRIM13O60858 GZMAP1-201ENST00000503054 631 ntBASIC4.6□□□□□ -1.67
TRIM13O60858 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.6□□□□□ -1.67
TRIM13O60858 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC4.6□□□□□ -1.67
TRIM13O60858 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.6□□□□□ -1.67
TRIM13O60858 AP003497.1-201ENST00000528472 562 ntBASIC4.6□□□□□ -1.67
TRIM13O60858 AP000907.2-201ENST00000530827 353 ntBASIC4.6□□□□□ -1.67
TRIM13O60858 MDM2-233ENST00000545204 398 ntTSL 5 BASIC4.6□□□□□ -1.67
TRIM13O60858 MIR4504-201ENST00000577413 92 ntBASIC4.6□□□□□ -1.67
TRIM13O60858 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
TRIM13O60858 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.6□□□□□ -1.67
TRIM13O60858 AL732372.2-225ENST00000642124 456 ntBASIC4.6□□□□□ -1.67
TRIM13O60858 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.6□□□□□ -1.67
TRIM13O60858 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM13O60858 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
TRIM13O60858 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
TRIM13O60858 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
TRIM13O60858 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.67
TRIM13O60858 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
TRIM13O60858 HSPE1P11-201ENST00000339579 310 ntBASIC4.59□□□□□ -1.67
TRIM13O60858 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
TRIM13O60858 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.59□□□□□ -1.67
TRIM13O60858 SNORD3E-201ENST00000362899 217 ntBASIC4.59□□□□□ -1.67
TRIM13O60858 RN7SKP115-201ENST00000363177 317 ntBASIC4.59□□□□□ -1.67
TRIM13O60858 RNA5SP391-201ENST00000363456 119 ntBASIC4.59□□□□□ -1.67
TRIM13O60858 SNORA62.1-201ENST00000364287 154 ntBASIC4.59□□□□□ -1.67
TRIM13O60858 RN7SKP15-201ENST00000364742 309 ntBASIC4.59□□□□□ -1.67
TRIM13O60858 RNU1-115P-201ENST00000365329 160 ntBASIC4.59□□□□□ -1.67
TRIM13O60858 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
TRIM13O60858 RNU6-1293P-201ENST00000384077 107 ntBASIC4.59□□□□□ -1.67
TRIM13O60858 RNU1-82P-201ENST00000390851 165 ntBASIC4.59□□□□□ -1.67
TRIM13O60858 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
TRIM13O60858 NDUFS5P1-201ENST00000405668 289 ntBASIC4.59□□□□□ -1.67
TRIM13O60858 AL591848.1-201ENST00000413092 322 ntBASIC4.59□□□□□ -1.67
TRIM13O60858 ZNF734P-201ENST00000419494 1534 ntBASIC4.59□□□□□ -1.67
TRIM13O60858 PSMA6P3-201ENST00000428242 164 ntBASIC4.59□□□□□ -1.67
TRIM13O60858 RPL21P91-201ENST00000429231 479 ntBASIC4.59□□□□□ -1.67
TRIM13O60858 AC079807.1-201ENST00000429993 481 ntBASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 139.3 ms