Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 MTND5P2-201ENST00000442927 1142 ntBASIC2.95□□□□□ -1.94
CDX4O14627 RPL7P36-201ENST00000444633 681 ntBASIC2.95□□□□□ -1.94
CDX4O14627 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.95□□□□□ -1.94
CDX4O14627 EEF1B2P7-201ENST00000451177 676 ntBASIC2.95□□□□□ -1.94
CDX4O14627 MRPS31P2-201ENST00000451581 518 ntBASIC2.95□□□□□ -1.94
CDX4O14627 USP9YP34-201ENST00000453983 808 ntBASIC2.95□□□□□ -1.94
CDX4O14627 RNU7-125P-201ENST00000458760 62 ntBASIC2.95□□□□□ -1.94
CDX4O14627 AC078785.3-201ENST00000476607 425 ntBASIC2.95□□□□□ -1.94
CDX4O14627 FAM172BP-201ENST00000487497 1089 ntBASIC2.95□□□□□ -1.94
CDX4O14627 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC2.95□□□□□ -1.94
CDX4O14627 RPL7P47-201ENST00000497299 556 ntBASIC2.95□□□□□ -1.94
CDX4O14627 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC2.95□□□□□ -1.94
CDX4O14627 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.95□□□□□ -1.94
CDX4O14627 SCGB1D5P-201ENST00000515134 247 ntBASIC2.95□□□□□ -1.94
CDX4O14627 RNU6-237P-201ENST00000515985 71 ntBASIC2.95□□□□□ -1.94
CDX4O14627 NARSP2-201ENST00000518524 679 ntBASIC2.95□□□□□ -1.94
CDX4O14627 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC2.95□□□□□ -1.94
CDX4O14627 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.95□□□□□ -1.94
CDX4O14627 AL121576.1-201ENST00000556055 276 ntBASIC2.95□□□□□ -1.94
CDX4O14627 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.95□□□□□ -1.94
CDX4O14627 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.95□□□□□ -1.94
CDX4O14627 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC2.95□□□□□ -1.94
CDX4O14627 AC012182.1-201ENST00000570133 895 ntBASIC2.95□□□□□ -1.94
CDX4O14627 AC099489.2-201ENST00000574976 260 ntBASIC2.95□□□□□ -1.94
CDX4O14627 PIGPP4-201ENST00000584447 307 ntBASIC2.95□□□□□ -1.94
CDX4O14627 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.95□□□□□ -1.94
CDX4O14627 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC2.95□□□□□ -1.94
CDX4O14627 AC011468.4-201ENST00000603942 409 ntBASIC2.95□□□□□ -1.94
CDX4O14627 AL031281.1-201ENST00000604049 488 ntBASIC2.95□□□□□ -1.94
CDX4O14627 AL592221.1-201ENST00000605266 382 ntBASIC2.95□□□□□ -1.94
CDX4O14627 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.95□□□□□ -1.94
CDX4O14627 AC245008.1-201ENST00000608123 476 ntBASIC2.95□□□□□ -1.94
CDX4O14627 AC245297.2-201ENST00000610119 565 ntBASIC2.95□□□□□ -1.94
CDX4O14627 AC084782.3-201ENST00000612282 578 ntBASIC2.95□□□□□ -1.94
CDX4O14627 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.95□□□□□ -1.94
CDX4O14627 AC231657.1-201ENST00000624313 397 ntBASIC2.95□□□□□ -1.94
CDX4O14627 MFF-206ENST00000392059 1710 ntTSL 5 BASIC2.95□□□□□ -1.94
CDX4O14627 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CDX4O14627 AP000776.1-201ENST00000530032 1663 ntBASIC2.95□□□□□ -1.94
CDX4O14627 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.94□□□□□ -1.94
CDX4O14627 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CDX4O14627 ZNF736P9Y-201ENST00000439586 1345 ntBASIC2.94□□□□□ -1.94
CDX4O14627 AL356473.1-201ENST00000406203 1408 ntBASIC2.94□□□□□ -1.94
CDX4O14627 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CDX4O14627 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.94□□□□□ -1.94
CDX4O14627 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC2.94□□□□□ -1.94
CDX4O14627 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CDX4O14627 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
CDX4O14627 AL672167.1-206ENST00000356293 943 ntBASIC2.94□□□□□ -1.94
CDX4O14627 RNU6-263P-201ENST00000363811 107 ntBASIC2.94□□□□□ -1.94
CDX4O14627 Y_RNA.408-201ENST00000383987 102 ntBASIC2.94□□□□□ -1.94
CDX4O14627 HMGB1P17-201ENST00000403495 628 ntBASIC2.94□□□□□ -1.94
CDX4O14627 RHEBP3-201ENST00000411920 351 ntBASIC2.94□□□□□ -1.94
CDX4O14627 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC2.94□□□□□ -1.94
CDX4O14627 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2.94□□□□□ -1.94
CDX4O14627 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.94□□□□□ -1.94
CDX4O14627 AC016907.1-201ENST00000419483 435 ntBASIC2.94□□□□□ -1.94
CDX4O14627 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC2.94□□□□□ -1.94
CDX4O14627 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.94□□□□□ -1.94
CDX4O14627 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC2.94□□□□□ -1.94
CDX4O14627 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.94□□□□□ -1.94
CDX4O14627 ARPC3P5-201ENST00000448802 534 ntBASIC2.94□□□□□ -1.94
CDX4O14627 MTCO3P11-201ENST00000455103 774 ntBASIC2.94□□□□□ -1.94
CDX4O14627 SUMO2P2-201ENST00000456482 255 ntBASIC2.94□□□□□ -1.94
CDX4O14627 snoU109.4-201ENST00000458953 143 ntBASIC2.94□□□□□ -1.94
CDX4O14627 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.94□□□□□ -1.94
CDX4O14627 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CDX4O14627 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.94□□□□□ -1.94
CDX4O14627 AC104090.1-201ENST00000506341 1171 ntBASIC2.94□□□□□ -1.94
CDX4O14627 XKRY-201ENST00000510392 1100 ntBASIC2.94□□□□□ -1.94
CDX4O14627 RNU1-41P-201ENST00000516161 162 ntBASIC2.94□□□□□ -1.94
CDX4O14627 RNU1-48P-201ENST00000516400 162 ntBASIC2.94□□□□□ -1.94
CDX4O14627 OR5AK1P-201ENST00000524837 922 ntBASIC2.94□□□□□ -1.94
CDX4O14627 AP004371.1-201ENST00000525240 214 ntBASIC2.94□□□□□ -1.94
CDX4O14627 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC2.94□□□□□ -1.94
CDX4O14627 SMILR-201ENST00000533992 553 ntTSL 4 BASIC2.94□□□□□ -1.94
CDX4O14627 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC2.94□□□□□ -1.94
CDX4O14627 ELOCP32-201ENST00000548625 324 ntBASIC2.94□□□□□ -1.94
CDX4O14627 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC2.94□□□□□ -1.94
CDX4O14627 AC090888.1-201ENST00000561335 1141 ntBASIC2.94□□□□□ -1.94
CDX4O14627 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC2.94□□□□□ -1.94
CDX4O14627 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC2.94□□□□□ -1.94
CDX4O14627 MIR4738-201ENST00000579134 87 ntBASIC2.94□□□□□ -1.94
CDX4O14627 MIR3690-201ENST00000580266 75 ntBASIC2.94□□□□□ -1.94
CDX4O14627 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC2.94□□□□□ -1.94
CDX4O14627 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC2.94□□□□□ -1.94
CDX4O14627 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC2.94□□□□□ -1.94
CDX4O14627 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC2.94□□□□□ -1.94
CDX4O14627 AC121247.2-201ENST00000604776 136 ntBASIC2.94□□□□□ -1.94
CDX4O14627 VIS1.1-201ENST00000610517 203 ntBASIC2.94□□□□□ -1.94
CDX4O14627 AL603755.1-201ENST00000619504 163 ntBASIC2.94□□□□□ -1.94
CDX4O14627 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.94□□□□□ -1.94
CDX4O14627 AC007671.2-201ENST00000637344 619 ntBASIC2.94□□□□□ -1.94
CDX4O14627 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CDX4O14627 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CDX4O14627 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CDX4O14627 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
CDX4O14627 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
CDX4O14627 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CDX4O14627 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms