Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 SNORD39.3-201ENST00000584451 71 ntBASIC2.16□□□□□ -2.06
UBFD1O14562 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.16□□□□□ -2.06
UBFD1O14562 VN1R88P-201ENST00000596787 292 ntBASIC2.16□□□□□ -2.06
UBFD1O14562 AC106791.2-201ENST00000604680 391 ntBASIC2.16□□□□□ -2.06
UBFD1O14562 AC007938.3-201ENST00000604965 623 ntBASIC2.16□□□□□ -2.06
UBFD1O14562 AP004247.3-201ENST00000608682 624 ntBASIC2.16□□□□□ -2.06
UBFD1O14562 AC112503.2-201ENST00000609005 552 ntBASIC2.16□□□□□ -2.06
UBFD1O14562 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.16□□□□□ -2.06
UBFD1O14562 MIR6895-201ENST00000613497 78 ntBASIC2.16□□□□□ -2.06
UBFD1O14562 AL355810.1-201ENST00000614629 552 ntBASIC2.16□□□□□ -2.06
UBFD1O14562 AC073968.1-201ENST00000618594 637 ntBASIC2.16□□□□□ -2.06
UBFD1O14562 AC009831.4-201ENST00000620744 325 ntBASIC2.16□□□□□ -2.06
UBFD1O14562 AC007275.1-201ENST00000621243 671 ntBASIC2.16□□□□□ -2.06
UBFD1O14562 AC040168.1-201ENST00000623594 991 ntBASIC2.16□□□□□ -2.06
UBFD1O14562 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC2.16□□□□□ -2.06
UBFD1O14562 CKAP2P1-201ENST00000555477 2049 ntBASIC2.16□□□□□ -2.06
UBFD1O14562 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.16□□□□□ -2.06
UBFD1O14562 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
UBFD1O14562 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
UBFD1O14562 AL139276.1-201ENST00000311910 1001 ntBASIC2.15□□□□□ -2.07
UBFD1O14562 RNU6-799P-201ENST00000363567 107 ntBASIC2.15□□□□□ -2.07
UBFD1O14562 SNORA67.1-201ENST00000364749 141 ntBASIC2.15□□□□□ -2.07
UBFD1O14562 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.15□□□□□ -2.07
UBFD1O14562 SNORA36C-201ENST00000384289 132 ntBASIC2.15□□□□□ -2.07
UBFD1O14562 RNU6-883P-201ENST00000384597 107 ntBASIC2.15□□□□□ -2.07
UBFD1O14562 CYCSP45-201ENST00000402289 315 ntBASIC2.15□□□□□ -2.07
UBFD1O14562 SNORA3.2-201ENST00000408221 125 ntBASIC2.15□□□□□ -2.07
UBFD1O14562 RNA5SP425-201ENST00000410336 112 ntBASIC2.15□□□□□ -2.07
UBFD1O14562 RNU6-712P-201ENST00000410558 100 ntBASIC2.15□□□□□ -2.07
UBFD1O14562 RNA5SP38-201ENST00000410750 119 ntBASIC2.15□□□□□ -2.07
UBFD1O14562 TRIM60P5Y-201ENST00000413946 574 ntBASIC2.15□□□□□ -2.07
UBFD1O14562 AC092447.6-201ENST00000414578 210 ntBASIC2.15□□□□□ -2.07
UBFD1O14562 HMGN2P30-201ENST00000423237 256 ntBASIC2.15□□□□□ -2.07
UBFD1O14562 VN1R42P-201ENST00000424651 344 ntBASIC2.15□□□□□ -2.07
UBFD1O14562 AC093422.3-201ENST00000428506 305 ntBASIC2.15□□□□□ -2.07
UBFD1O14562 RPL31P54-201ENST00000429803 370 ntBASIC2.15□□□□□ -2.07
UBFD1O14562 UBE2V1P6-201ENST00000430840 422 ntBASIC2.15□□□□□ -2.07
UBFD1O14562 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC2.15□□□□□ -2.07
UBFD1O14562 AC023424.2-201ENST00000493479 777 ntBASIC2.15□□□□□ -2.07
UBFD1O14562 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.15□□□□□ -2.07
UBFD1O14562 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC2.15□□□□□ -2.07
UBFD1O14562 AC008716.1-201ENST00000511084 513 ntBASIC2.15□□□□□ -2.07
UBFD1O14562 AC008837.1-201ENST00000511513 412 ntBASIC2.15□□□□□ -2.07
UBFD1O14562 RNU1-41P-201ENST00000516161 162 ntBASIC2.15□□□□□ -2.07
UBFD1O14562 RNU1-48P-201ENST00000516400 162 ntBASIC2.15□□□□□ -2.07
UBFD1O14562 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC2.15□□□□□ -2.07
UBFD1O14562 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.15□□□□□ -2.07
UBFD1O14562 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC2.15□□□□□ -2.07
UBFD1O14562 AC095057.3-201ENST00000567102 1157 ntBASIC2.15□□□□□ -2.07
UBFD1O14562 AC023824.3-201ENST00000569003 562 ntBASIC2.15□□□□□ -2.07
UBFD1O14562 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.15□□□□□ -2.07
UBFD1O14562 AC020895.1-201ENST00000595362 272 ntBASIC2.15□□□□□ -2.07
UBFD1O14562 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC2.15□□□□□ -2.07
UBFD1O14562 AC040174.2-201ENST00000602701 465 ntBASIC2.15□□□□□ -2.07
UBFD1O14562 AC009220.3-201ENST00000604318 586 ntBASIC2.15□□□□□ -2.07
UBFD1O14562 AP001330.4-201ENST00000604350 154 ntBASIC2.15□□□□□ -2.07
UBFD1O14562 AL161734.1-201ENST00000609720 557 ntBASIC2.15□□□□□ -2.07
UBFD1O14562 AC104307.1-201ENST00000616142 196 ntBASIC2.15□□□□□ -2.07
UBFD1O14562 AC092650.2-201ENST00000619984 902 ntBASIC2.15□□□□□ -2.07
UBFD1O14562 AC097372.4-201ENST00000625025 466 ntBASIC2.15□□□□□ -2.07
UBFD1O14562 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.15□□□□□ -2.07
UBFD1O14562 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
UBFD1O14562 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.15□□□□□ -2.07
UBFD1O14562 AC130650.2-201ENST00000618736 2403 ntBASIC2.15□□□□□ -2.07
UBFD1O14562 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC2.14□□□□□ -2.07
UBFD1O14562 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
UBFD1O14562 FAM133CP-201ENST00000332869 704 ntBASIC2.14□□□□□ -2.07
UBFD1O14562 RNA5SP289-201ENST00000362332 137 ntBASIC2.14□□□□□ -2.07
UBFD1O14562 MIR525-201ENST00000384978 85 ntBASIC2.14□□□□□ -2.07
UBFD1O14562 MIR221-201ENST00000385135 110 ntBASIC2.14□□□□□ -2.07
UBFD1O14562 RNU4-53P-201ENST00000410828 140 ntBASIC2.14□□□□□ -2.07
UBFD1O14562 AC107081.1-201ENST00000414975 361 ntBASIC2.14□□□□□ -2.07
UBFD1O14562 MTCO3P12-201ENST00000416718 547 ntBASIC2.14□□□□□ -2.07
UBFD1O14562 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.14□□□□□ -2.07
UBFD1O14562 AC092427.1-202ENST00000430569 476 ntBASIC2.14□□□□□ -2.07
UBFD1O14562 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.14□□□□□ -2.07
UBFD1O14562 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.14□□□□□ -2.07
UBFD1O14562 AC092170.1-201ENST00000440211 356 ntBASIC2.14□□□□□ -2.07
UBFD1O14562 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.14□□□□□ -2.07
UBFD1O14562 MTND2P3-201ENST00000452458 470 ntBASIC2.14□□□□□ -2.07
UBFD1O14562 NAMPTP2-201ENST00000505629 1115 ntBASIC2.14□□□□□ -2.07
UBFD1O14562 CDC42P4-201ENST00000510507 563 ntBASIC2.14□□□□□ -2.07
UBFD1O14562 AC105914.1-201ENST00000511798 226 ntBASIC2.14□□□□□ -2.07
UBFD1O14562 SNORA31.8-201ENST00000516327 108 ntBASIC2.14□□□□□ -2.07
UBFD1O14562 IGLV3-17-201ENST00000519099 244 ntBASIC2.14□□□□□ -2.07
UBFD1O14562 ERHP1-201ENST00000523006 310 ntBASIC2.14□□□□□ -2.07
UBFD1O14562 SNRPGP16-201ENST00000533275 226 ntBASIC2.14□□□□□ -2.07
UBFD1O14562 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.14□□□□□ -2.07
UBFD1O14562 MTATP6P25-201ENST00000574491 261 ntBASIC2.14□□□□□ -2.07
UBFD1O14562 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.14□□□□□ -2.07
UBFD1O14562 AL158827.2-201ENST00000602494 330 ntBASIC2.14□□□□□ -2.07
UBFD1O14562 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.14□□□□□ -2.07
UBFD1O14562 AC006329.2-201ENST00000611491 394 ntBASIC2.14□□□□□ -2.07
UBFD1O14562 AC008083.4-201ENST00000615076 444 ntBASIC2.14□□□□□ -2.07
UBFD1O14562 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.14□□□□□ -2.07
UBFD1O14562 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC2.14□□□□□ -2.07
UBFD1O14562 AC093591.3-201ENST00000634516 308 ntBASIC2.14□□□□□ -2.07
UBFD1O14562 AL691447.3-201ENST00000635020 330 ntBASIC2.14□□□□□ -2.07
UBFD1O14562 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
UBFD1O14562 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 164.3 ms