Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 AC021678.1-201ENST00000505195 936 ntBASIC2.25□□□□□ -2.05
SMKR1H3BMG3 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC2.25□□□□□ -2.05
SMKR1H3BMG3 RN7SKP40-201ENST00000517211 242 ntBASIC2.25□□□□□ -2.05
SMKR1H3BMG3 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.25□□□□□ -2.05
SMKR1H3BMG3 SUB1P1-201ENST00000524415 382 ntBASIC2.25□□□□□ -2.05
SMKR1H3BMG3 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC2.25□□□□□ -2.05
SMKR1H3BMG3 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.25□□□□□ -2.05
SMKR1H3BMG3 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.25□□□□□ -2.05
SMKR1H3BMG3 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC2.25□□□□□ -2.05
SMKR1H3BMG3 GLYCAM1-201ENST00000546596 285 ntBASIC2.25□□□□□ -2.05
SMKR1H3BMG3 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC2.25□□□□□ -2.05
SMKR1H3BMG3 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.25□□□□□ -2.05
SMKR1H3BMG3 AC009712.1-201ENST00000564938 316 ntBASIC2.25□□□□□ -2.05
SMKR1H3BMG3 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
SMKR1H3BMG3 MIR4276-201ENST00000584832 70 ntBASIC2.25□□□□□ -2.05
SMKR1H3BMG3 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC2.25□□□□□ -2.05
SMKR1H3BMG3 RPL23AP88-201ENST00000605759 454 ntBASIC2.25□□□□□ -2.05
SMKR1H3BMG3 AC006270.3-201ENST00000605967 1036 ntBASIC2.25□□□□□ -2.05
SMKR1H3BMG3 AC024560.3-201ENST00000608482 349 ntBASIC2.25□□□□□ -2.05
SMKR1H3BMG3 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC2.25□□□□□ -2.05
SMKR1H3BMG3 AC107075.1-201ENST00000613695 314 ntBASIC2.25□□□□□ -2.05
SMKR1H3BMG3 AC004696.1-201ENST00000614345 607 ntBASIC2.25□□□□□ -2.05
SMKR1H3BMG3 AC010133.1-201ENST00000615809 842 ntBASIC2.25□□□□□ -2.05
SMKR1H3BMG3 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.25□□□□□ -2.05
SMKR1H3BMG3 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC2.25□□□□□ -2.05
SMKR1H3BMG3 MIR6733-201ENST00000635723 61 ntBASIC2.25□□□□□ -2.05
SMKR1H3BMG3 AC099654.8-201ENST00000637757 681 ntBASIC2.25□□□□□ -2.05
SMKR1H3BMG3 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
SMKR1H3BMG3 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
SMKR1H3BMG3 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
SMKR1H3BMG3 AL049781.1-201ENST00000623195 3585 ntBASIC2.25□□□□□ -2.05
SMKR1H3BMG3 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
SMKR1H3BMG3 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
SMKR1H3BMG3 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC2.24□□□□□ -2.05
SMKR1H3BMG3 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
SMKR1H3BMG3 SET-203ENST00000372688 801 ntTSL 2 BASIC2.24□□□□□ -2.05
SMKR1H3BMG3 RNU1-109P-201ENST00000383960 147 ntBASIC2.24□□□□□ -2.05
SMKR1H3BMG3 Y_RNA.465-201ENST00000384293 102 ntBASIC2.24□□□□□ -2.05
SMKR1H3BMG3 RNU6-140P-201ENST00000384566 108 ntBASIC2.24□□□□□ -2.05
SMKR1H3BMG3 U3.20-201ENST00000390909 217 ntBASIC2.24□□□□□ -2.05
SMKR1H3BMG3 RN7SKP111-201ENST00000410349 271 ntBASIC2.24□□□□□ -2.05
SMKR1H3BMG3 RNA5SP274-201ENST00000410484 108 ntBASIC2.24□□□□□ -2.05
SMKR1H3BMG3 VN1R51P-201ENST00000411675 945 ntBASIC2.24□□□□□ -2.05
SMKR1H3BMG3 AL513331.1-201ENST00000411908 397 ntBASIC2.24□□□□□ -2.05
SMKR1H3BMG3 USP9YP33-201ENST00000412220 421 ntBASIC2.24□□□□□ -2.05
SMKR1H3BMG3 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
SMKR1H3BMG3 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.24□□□□□ -2.05
SMKR1H3BMG3 AL451054.2-201ENST00000420896 202 ntBASIC2.24□□□□□ -2.05
SMKR1H3BMG3 AC098614.2-201ENST00000426040 255 ntBASIC2.24□□□□□ -2.05
SMKR1H3BMG3 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC2.24□□□□□ -2.05
SMKR1H3BMG3 AC092427.1-202ENST00000430569 476 ntBASIC2.24□□□□□ -2.05
SMKR1H3BMG3 AC091286.1-201ENST00000431233 461 ntBASIC2.24□□□□□ -2.05
SMKR1H3BMG3 USP9YP35-201ENST00000435696 412 ntBASIC2.24□□□□□ -2.05
SMKR1H3BMG3 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.24□□□□□ -2.05
SMKR1H3BMG3 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.24□□□□□ -2.05
SMKR1H3BMG3 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.24□□□□□ -2.05
SMKR1H3BMG3 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.24□□□□□ -2.05
SMKR1H3BMG3 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.24□□□□□ -2.05
SMKR1H3BMG3 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.24□□□□□ -2.05
SMKR1H3BMG3 RPL21P134-201ENST00000453468 483 ntBASIC2.24□□□□□ -2.05
SMKR1H3BMG3 OR6K1P-201ENST00000456766 971 ntBASIC2.24□□□□□ -2.05
SMKR1H3BMG3 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC2.24□□□□□ -2.05
SMKR1H3BMG3 AC108729.1-201ENST00000487812 947 ntBASIC2.24□□□□□ -2.05
SMKR1H3BMG3 SUMO2P6-201ENST00000505273 288 ntBASIC2.24□□□□□ -2.05
SMKR1H3BMG3 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
SMKR1H3BMG3 AC114786.4-201ENST00000508771 728 ntBASIC2.24□□□□□ -2.05
SMKR1H3BMG3 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.24□□□□□ -2.05
SMKR1H3BMG3 MRPS36P2-201ENST00000512569 299 ntBASIC2.24□□□□□ -2.05
SMKR1H3BMG3 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.24□□□□□ -2.05
SMKR1H3BMG3 AC114797.1-201ENST00000514003 728 ntBASIC2.24□□□□□ -2.05
SMKR1H3BMG3 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.24□□□□□ -2.05
SMKR1H3BMG3 ATP5F1P5-201ENST00000526403 760 ntBASIC2.24□□□□□ -2.05
SMKR1H3BMG3 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.24□□□□□ -2.05
SMKR1H3BMG3 ZKSCAN7P1-201ENST00000543668 673 ntBASIC2.24□□□□□ -2.05
SMKR1H3BMG3 OR8R1P-201ENST00000543943 764 ntBASIC2.24□□□□□ -2.05
SMKR1H3BMG3 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.24□□□□□ -2.05
SMKR1H3BMG3 AC087465.1-201ENST00000560574 245 ntBASIC2.24□□□□□ -2.05
SMKR1H3BMG3 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC2.24□□□□□ -2.05
SMKR1H3BMG3 AC025281.1-201ENST00000567026 265 ntBASIC2.24□□□□□ -2.05
SMKR1H3BMG3 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC2.24□□□□□ -2.05
SMKR1H3BMG3 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC2.24□□□□□ -2.05
SMKR1H3BMG3 MIR2682-201ENST00000580305 110 ntBASIC2.24□□□□□ -2.05
SMKR1H3BMG3 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC2.24□□□□□ -2.05
SMKR1H3BMG3 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.24□□□□□ -2.05
SMKR1H3BMG3 AC002545.1-201ENST00000592511 181 ntBASIC2.24□□□□□ -2.05
SMKR1H3BMG3 AL355877.2-201ENST00000603670 358 ntBASIC2.24□□□□□ -2.05
SMKR1H3BMG3 FTX_3.1-201ENST00000610451 147 ntBASIC2.24□□□□□ -2.05
SMKR1H3BMG3 TUG1_2.1-201ENST00000614234 87 ntBASIC2.24□□□□□ -2.05
SMKR1H3BMG3 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.24□□□□□ -2.05
SMKR1H3BMG3 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.24□□□□□ -2.05
SMKR1H3BMG3 AC099063.3-201ENST00000642066 185 ntBASIC2.24□□□□□ -2.05
SMKR1H3BMG3 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.24□□□□□ -2.05
SMKR1H3BMG3 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
SMKR1H3BMG3 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.23□□□□□ -2.05
SMKR1H3BMG3 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.23□□□□□ -2.05
SMKR1H3BMG3 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.23□□□□□ -2.05
SMKR1H3BMG3 FTLP6-201ENST00000355274 422 ntBASIC2.23□□□□□ -2.05
SMKR1H3BMG3 Y_RNA.192-201ENST00000363977 102 ntBASIC2.23□□□□□ -2.05
SMKR1H3BMG3 SNORA68.1-201ENST00000364537 132 ntBASIC2.23□□□□□ -2.05
SMKR1H3BMG3 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms