Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.98□□□□□ -1.93
NPIPA2E9PIF3 HIGD1AP1-201ENST00000550979 275 ntBASIC2.98□□□□□ -1.93
NPIPA2E9PIF3 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.98□□□□□ -1.93
NPIPA2E9PIF3 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC2.98□□□□□ -1.93
NPIPA2E9PIF3 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC2.98□□□□□ -1.93
NPIPA2E9PIF3 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC2.98□□□□□ -1.93
NPIPA2E9PIF3 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC2.98□□□□□ -1.93
NPIPA2E9PIF3 MIR3921-201ENST00000577308 85 ntBASIC2.98□□□□□ -1.93
NPIPA2E9PIF3 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
NPIPA2E9PIF3 MIR4760-201ENST00000585040 80 ntBASIC2.98□□□□□ -1.93
NPIPA2E9PIF3 VN1R82P-201ENST00000601481 356 ntBASIC2.98□□□□□ -1.93
NPIPA2E9PIF3 AL162274.2-201ENST00000614406 332 ntBASIC2.98□□□□□ -1.93
NPIPA2E9PIF3 AL136981.2-201ENST00000617319 734 ntBASIC2.98□□□□□ -1.93
NPIPA2E9PIF3 SNORD39.4-201ENST00000620099 78 ntBASIC2.98□□□□□ -1.93
NPIPA2E9PIF3 AP002782.1-201ENST00000623107 614 ntBASIC2.98□□□□□ -1.93
NPIPA2E9PIF3 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
NPIPA2E9PIF3 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.98□□□□□ -1.93
NPIPA2E9PIF3 AL353743.1-202ENST00000431724 1695 ntBASIC2.98□□□□□ -1.93
NPIPA2E9PIF3 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
NPIPA2E9PIF3 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC2.97□□□□□ -1.93
NPIPA2E9PIF3 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
NPIPA2E9PIF3 RNU6-777P-201ENST00000364265 104 ntBASIC2.97□□□□□ -1.93
NPIPA2E9PIF3 Y_RNA.234-201ENST00000364409 97 ntBASIC2.97□□□□□ -1.93
NPIPA2E9PIF3 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.97□□□□□ -1.93
NPIPA2E9PIF3 AC104332.2-201ENST00000429959 156 ntBASIC2.97□□□□□ -1.93
NPIPA2E9PIF3 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.97□□□□□ -1.93
NPIPA2E9PIF3 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC2.97□□□□□ -1.93
NPIPA2E9PIF3 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.97□□□□□ -1.93
NPIPA2E9PIF3 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.97□□□□□ -1.93
NPIPA2E9PIF3 AL117351.1-201ENST00000438864 766 ntBASIC2.97□□□□□ -1.93
NPIPA2E9PIF3 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.97□□□□□ -1.93
NPIPA2E9PIF3 snoU13.8-201ENST00000458890 104 ntBASIC2.97□□□□□ -1.93
NPIPA2E9PIF3 SNORD11.1-201ENST00000459482 85 ntBASIC2.97□□□□□ -1.93
NPIPA2E9PIF3 RPL30P9-201ENST00000465586 330 ntBASIC2.97□□□□□ -1.93
NPIPA2E9PIF3 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.97□□□□□ -1.93
NPIPA2E9PIF3 AHI1-208ENST00000488690 712 ntTSL 5 BASIC2.97□□□□□ -1.93
NPIPA2E9PIF3 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.97□□□□□ -1.93
NPIPA2E9PIF3 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.97□□□□□ -1.93
NPIPA2E9PIF3 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
NPIPA2E9PIF3 AL359273.1-201ENST00000510918 627 ntBASIC2.97□□□□□ -1.93
NPIPA2E9PIF3 MTCYBP43-201ENST00000513621 740 ntBASIC2.97□□□□□ -1.93
NPIPA2E9PIF3 RNA5SP385-201ENST00000515947 110 ntBASIC2.97□□□□□ -1.93
NPIPA2E9PIF3 RNU5A-4P-201ENST00000516588 111 ntBASIC2.97□□□□□ -1.93
NPIPA2E9PIF3 COX6CP8-201ENST00000522620 226 ntBASIC2.97□□□□□ -1.93
NPIPA2E9PIF3 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC2.97□□□□□ -1.93
NPIPA2E9PIF3 MTND1P24-201ENST00000552175 861 ntBASIC2.97□□□□□ -1.93
NPIPA2E9PIF3 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.97□□□□□ -1.93
NPIPA2E9PIF3 DUXAP1-201ENST00000556632 463 ntBASIC2.97□□□□□ -1.93
NPIPA2E9PIF3 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.97□□□□□ -1.93
NPIPA2E9PIF3 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC2.97□□□□□ -1.93
NPIPA2E9PIF3 AC010653.1-201ENST00000571108 881 ntBASIC2.97□□□□□ -1.93
NPIPA2E9PIF3 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.97□□□□□ -1.93
NPIPA2E9PIF3 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.97□□□□□ -1.93
NPIPA2E9PIF3 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC2.97□□□□□ -1.93
NPIPA2E9PIF3 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC2.97□□□□□ -1.93
NPIPA2E9PIF3 AL592221.1-201ENST00000605266 382 ntBASIC2.97□□□□□ -1.93
NPIPA2E9PIF3 uc_338.1-201ENST00000612113 180 ntBASIC2.97□□□□□ -1.93
NPIPA2E9PIF3 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
NPIPA2E9PIF3 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.97□□□□□ -1.93
NPIPA2E9PIF3 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC2.96□□□□□ -1.93
NPIPA2E9PIF3 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
NPIPA2E9PIF3 AL355596.1-201ENST00000565399 3996 ntBASIC2.96□□□□□ -1.93
NPIPA2E9PIF3 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
NPIPA2E9PIF3 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
NPIPA2E9PIF3 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.96□□□□□ -1.94
NPIPA2E9PIF3 RNU1-75P-201ENST00000347264 129 ntBASIC2.96□□□□□ -1.94
NPIPA2E9PIF3 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.96□□□□□ -1.94
NPIPA2E9PIF3 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
NPIPA2E9PIF3 SKINT1L-201ENST00000401057 817 ntBASIC2.96□□□□□ -1.94
NPIPA2E9PIF3 MIR1290-201ENST00000408735 78 ntBASIC2.96□□□□□ -1.94
NPIPA2E9PIF3 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.96□□□□□ -1.94
NPIPA2E9PIF3 NDUFB4P5-201ENST00000415445 361 ntBASIC2.96□□□□□ -1.94
NPIPA2E9PIF3 HMGB1P49-201ENST00000418882 569 ntBASIC2.96□□□□□ -1.94
NPIPA2E9PIF3 MTCO2P21-201ENST00000419780 677 ntBASIC2.96□□□□□ -1.94
NPIPA2E9PIF3 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC2.96□□□□□ -1.94
NPIPA2E9PIF3 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC2.96□□□□□ -1.94
NPIPA2E9PIF3 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.96□□□□□ -1.94
NPIPA2E9PIF3 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.96□□□□□ -1.94
NPIPA2E9PIF3 MTND1P32-201ENST00000433043 938 ntBASIC2.96□□□□□ -1.94
NPIPA2E9PIF3 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.96□□□□□ -1.94
NPIPA2E9PIF3 CST9LP2-201ENST00000437612 320 ntBASIC2.96□□□□□ -1.94
NPIPA2E9PIF3 THAP5P1-201ENST00000439089 262 ntBASIC2.96□□□□□ -1.94
NPIPA2E9PIF3 Z73417.1-201ENST00000447373 778 ntBASIC2.96□□□□□ -1.94
NPIPA2E9PIF3 AL592447.1-201ENST00000447592 540 ntBASIC2.96□□□□□ -1.94
NPIPA2E9PIF3 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.96□□□□□ -1.94
NPIPA2E9PIF3 RPS3AP43-201ENST00000479743 781 ntBASIC2.96□□□□□ -1.94
NPIPA2E9PIF3 RPS4XP22-201ENST00000480755 780 ntBASIC2.96□□□□□ -1.94
NPIPA2E9PIF3 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC2.96□□□□□ -1.94
NPIPA2E9PIF3 AC021146.5-201ENST00000503544 545 ntBASIC2.96□□□□□ -1.94
NPIPA2E9PIF3 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC2.96□□□□□ -1.94
NPIPA2E9PIF3 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC2.96□□□□□ -1.94
NPIPA2E9PIF3 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC2.96□□□□□ -1.94
NPIPA2E9PIF3 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.96□□□□□ -1.94
NPIPA2E9PIF3 RN7SKP265-201ENST00000516448 223 ntBASIC2.96□□□□□ -1.94
NPIPA2E9PIF3 RNU6-714P-201ENST00000516963 103 ntBASIC2.96□□□□□ -1.94
NPIPA2E9PIF3 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.96□□□□□ -1.94
NPIPA2E9PIF3 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC2.96□□□□□ -1.94
NPIPA2E9PIF3 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
NPIPA2E9PIF3 AC011602.1-201ENST00000546484 331 ntBASIC2.96□□□□□ -1.94
NPIPA2E9PIF3 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms