Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC6.07□□□□□ -1.44
RCCD1A6NED2 EDDM3DP-201ENST00000554692 434 ntBASIC6.07□□□□□ -1.44
RCCD1A6NED2 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC6.07□□□□□ -1.44
RCCD1A6NED2 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC6.07□□□□□ -1.44
RCCD1A6NED2 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC6.07□□□□□ -1.44
RCCD1A6NED2 FAM27E2-201ENST00000619668 403 ntBASIC6.07□□□□□ -1.44
RCCD1A6NED2 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RCCD1A6NED2 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RCCD1A6NED2 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
RCCD1A6NED2 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
RCCD1A6NED2 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC6.07□□□□□ -1.44
RCCD1A6NED2 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RCCD1A6NED2 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RCCD1A6NED2 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
RCCD1A6NED2 AC008725.1-201ENST00000605123 2263 ntBASIC6.06□□□□□ -1.44
RCCD1A6NED2 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RCCD1A6NED2 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RCCD1A6NED2 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC6.06□□□□□ -1.44
RCCD1A6NED2 RNU6-263P-201ENST00000363811 107 ntBASIC6.06□□□□□ -1.44
RCCD1A6NED2 RNA5SP500-201ENST00000364486 119 ntBASIC6.06□□□□□ -1.44
RCCD1A6NED2 RNA5SP279-201ENST00000365513 117 ntBASIC6.06□□□□□ -1.44
RCCD1A6NED2 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
RCCD1A6NED2 AC016739.1-201ENST00000405359 345 ntBASIC6.06□□□□□ -1.44
RCCD1A6NED2 RNU4-78P-201ENST00000410940 126 ntBASIC6.06□□□□□ -1.44
RCCD1A6NED2 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC6.06□□□□□ -1.44
RCCD1A6NED2 DPPA2P2-201ENST00000418220 897 ntBASIC6.06□□□□□ -1.44
RCCD1A6NED2 AL117339.3-201ENST00000418733 162 ntBASIC6.06□□□□□ -1.44
RCCD1A6NED2 RPL21P40-201ENST00000428586 483 ntBASIC6.06□□□□□ -1.44
RCCD1A6NED2 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC6.06□□□□□ -1.44
RCCD1A6NED2 LINC02210-201ENST00000444561 288 ntBASIC6.06□□□□□ -1.44
RCCD1A6NED2 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC6.06□□□□□ -1.44
RCCD1A6NED2 HIGD1AP2-201ENST00000446367 280 ntBASIC6.06□□□□□ -1.44
RCCD1A6NED2 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC6.06□□□□□ -1.44
RCCD1A6NED2 U8.22-201ENST00000459141 133 ntBASIC6.06□□□□□ -1.44
RCCD1A6NED2 AC108161.1-201ENST00000461060 402 ntBASIC6.06□□□□□ -1.44
RCCD1A6NED2 CR383656.1-201ENST00000484916 377 ntBASIC6.06□□□□□ -1.44
RCCD1A6NED2 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC6.06□□□□□ -1.44
RCCD1A6NED2 AC103996.1-201ENST00000555468 102 ntBASIC6.06□□□□□ -1.44
RCCD1A6NED2 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC6.06□□□□□ -1.44
RCCD1A6NED2 AC090617.3-201ENST00000573670 475 ntBASIC6.06□□□□□ -1.44
RCCD1A6NED2 MIR4271-201ENST00000582451 67 ntBASIC6.06□□□□□ -1.44
RCCD1A6NED2 AC107294.1-201ENST00000609524 467 ntBASIC6.06□□□□□ -1.44
RCCD1A6NED2 uc_338.31-201ENST00000615595 186 ntBASIC6.06□□□□□ -1.44
RCCD1A6NED2 AL591926.1-201ENST00000620542 217 ntBASIC6.06□□□□□ -1.44
RCCD1A6NED2 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC6.06□□□□□ -1.44
RCCD1A6NED2 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RCCD1A6NED2 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
RCCD1A6NED2 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
RCCD1A6NED2 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
RCCD1A6NED2 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.06□□□□□ -1.44
RCCD1A6NED2 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RCCD1A6NED2 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
RCCD1A6NED2 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
RCCD1A6NED2 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
RCCD1A6NED2 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC6.05□□□□□ -1.44
RCCD1A6NED2 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RCCD1A6NED2 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RCCD1A6NED2 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RCCD1A6NED2 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.05□□□□□ -1.44
RCCD1A6NED2 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC6.05□□□□□ -1.44
RCCD1A6NED2 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RCCD1A6NED2 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC6.05□□□□□ -1.44
RCCD1A6NED2 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RCCD1A6NED2 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
RCCD1A6NED2 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
RCCD1A6NED2 RNU6-918P-201ENST00000391219 106 ntBASIC6.05□□□□□ -1.44
RCCD1A6NED2 GLULP6-201ENST00000399502 913 ntBASIC6.05□□□□□ -1.44
RCCD1A6NED2 GCNT1P4-201ENST00000404096 329 ntBASIC6.05□□□□□ -1.44
RCCD1A6NED2 RNU2-61P-201ENST00000411069 191 ntBASIC6.05□□□□□ -1.44
RCCD1A6NED2 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC6.05□□□□□ -1.44
RCCD1A6NED2 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC6.05□□□□□ -1.44
RCCD1A6NED2 MRPL53P1-201ENST00000414323 319 ntBASIC6.05□□□□□ -1.44
RCCD1A6NED2 AC016769.2-201ENST00000414815 475 ntBASIC6.05□□□□□ -1.44
RCCD1A6NED2 AC079809.1-201ENST00000415468 276 ntBASIC6.05□□□□□ -1.44
RCCD1A6NED2 TMSB10P2-201ENST00000416049 131 ntBASIC6.05□□□□□ -1.44
RCCD1A6NED2 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.05□□□□□ -1.44
RCCD1A6NED2 CFL1P1-202ENST00000432948 411 ntBASIC6.05□□□□□ -1.44
RCCD1A6NED2 KNOP1P3-201ENST00000446933 426 ntBASIC6.05□□□□□ -1.44
RCCD1A6NED2 AC005077.1-201ENST00000449226 375 ntBASIC6.05□□□□□ -1.44
RCCD1A6NED2 IGHV5-78-201ENST00000450948 295 ntBASIC6.05□□□□□ -1.44
RCCD1A6NED2 AC023141.9-201ENST00000458734 412 ntBASIC6.05□□□□□ -1.44
RCCD1A6NED2 AC018638.3-201ENST00000461273 132 ntBASIC6.05□□□□□ -1.44
RCCD1A6NED2 AC087588.1-201ENST00000462203 316 ntBASIC6.05□□□□□ -1.44
RCCD1A6NED2 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC6.05□□□□□ -1.44
RCCD1A6NED2 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC6.05□□□□□ -1.44
RCCD1A6NED2 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RCCD1A6NED2 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC6.05□□□□□ -1.44
RCCD1A6NED2 RNA5SP473-201ENST00000516402 125 ntBASIC6.05□□□□□ -1.44
RCCD1A6NED2 IGLV3-24-201ENST00000517477 197 ntBASIC6.05□□□□□ -1.44
RCCD1A6NED2 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.05□□□□□ -1.44
RCCD1A6NED2 AC122688.1-201ENST00000541494 223 ntBASIC6.05□□□□□ -1.44
RCCD1A6NED2 AC026826.3-201ENST00000561747 158 ntBASIC6.05□□□□□ -1.44
RCCD1A6NED2 SNORD113-5-201ENST00000607261 78 ntBASIC6.05□□□□□ -1.44
RCCD1A6NED2 AL136131.3-201ENST00000607600 188 ntBASIC6.05□□□□□ -1.44
RCCD1A6NED2 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.05□□□□□ -1.44
RCCD1A6NED2 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.05□□□□□ -1.44
RCCD1A6NED2 AC108706.1-201ENST00000611053 297 ntBASIC6.05□□□□□ -1.44
RCCD1A6NED2 AC011476.5-201ENST00000615594 130 ntBASIC6.05□□□□□ -1.44
RCCD1A6NED2 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RCCD1A6NED2 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms