Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 BX005214.3-202ENST00000619809 325 ntBASIC4.66□□□□□ -1.66
CCDC163A0A0D9SF12 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC163A0A0D9SF12 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC163A0A0D9SF12 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC163A0A0D9SF12 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
CCDC163A0A0D9SF12 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.66□□□□□ -1.66
CCDC163A0A0D9SF12 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC163A0A0D9SF12 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC163A0A0D9SF12 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC163A0A0D9SF12 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC163A0A0D9SF12 MTND4P35-201ENST00000604257 1375 ntBASIC4.65□□□□□ -1.66
CCDC163A0A0D9SF12 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.65□□□□□ -1.66
CCDC163A0A0D9SF12 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.65□□□□□ -1.66
CCDC163A0A0D9SF12 AC004972.1-201ENST00000623934 2209 ntBASIC4.65□□□□□ -1.66
CCDC163A0A0D9SF12 AC009812.4-201ENST00000569134 1805 ntBASIC4.65□□□□□ -1.66
CCDC163A0A0D9SF12 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.65□□□□□ -1.66
CCDC163A0A0D9SF12 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
CCDC163A0A0D9SF12 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
CCDC163A0A0D9SF12 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.65□□□□□ -1.66
CCDC163A0A0D9SF12 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.65□□□□□ -1.66
CCDC163A0A0D9SF12 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
CCDC163A0A0D9SF12 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.65□□□□□ -1.66
CCDC163A0A0D9SF12 RNU6-600P-201ENST00000362524 99 ntBASIC4.65□□□□□ -1.67
CCDC163A0A0D9SF12 Y_RNA.72-201ENST00000362894 103 ntBASIC4.65□□□□□ -1.67
CCDC163A0A0D9SF12 Y_RNA.356-201ENST00000365475 113 ntBASIC4.65□□□□□ -1.67
CCDC163A0A0D9SF12 AL359643.1-201ENST00000404109 423 ntBASIC4.65□□□□□ -1.67
CCDC163A0A0D9SF12 HSPE1P8-201ENST00000406997 288 ntBASIC4.65□□□□□ -1.67
CCDC163A0A0D9SF12 Y_RNA.615-201ENST00000410769 117 ntBASIC4.65□□□□□ -1.67
CCDC163A0A0D9SF12 AC079809.1-201ENST00000415468 276 ntBASIC4.65□□□□□ -1.67
CCDC163A0A0D9SF12 AL161631.1-201ENST00000417933 486 ntBASIC4.65□□□□□ -1.67
CCDC163A0A0D9SF12 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.65□□□□□ -1.67
CCDC163A0A0D9SF12 RPL7AP25-201ENST00000423357 805 ntBASIC4.65□□□□□ -1.67
CCDC163A0A0D9SF12 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.65□□□□□ -1.67
CCDC163A0A0D9SF12 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC4.65□□□□□ -1.67
CCDC163A0A0D9SF12 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.65□□□□□ -1.67
CCDC163A0A0D9SF12 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.65□□□□□ -1.67
CCDC163A0A0D9SF12 snoU13.24-201ENST00000458998 104 ntBASIC4.65□□□□□ -1.67
CCDC163A0A0D9SF12 SCARNA10-201ENST00000459255 330 ntBASIC4.65□□□□□ -1.67
CCDC163A0A0D9SF12 AC108860.1-201ENST00000484521 383 ntBASIC4.65□□□□□ -1.67
CCDC163A0A0D9SF12 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC4.65□□□□□ -1.67
CCDC163A0A0D9SF12 AC091167.1-201ENST00000492017 396 ntBASIC4.65□□□□□ -1.67
CCDC163A0A0D9SF12 AC104164.2-201ENST00000496953 495 ntBASIC4.65□□□□□ -1.67
CCDC163A0A0D9SF12 RPS27AP13-201ENST00000498403 237 ntBASIC4.65□□□□□ -1.67
CCDC163A0A0D9SF12 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.65□□□□□ -1.67
CCDC163A0A0D9SF12 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC4.65□□□□□ -1.67
CCDC163A0A0D9SF12 Y_RNA.689-201ENST00000516589 107 ntBASIC4.65□□□□□ -1.67
CCDC163A0A0D9SF12 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC4.65□□□□□ -1.67
CCDC163A0A0D9SF12 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.65□□□□□ -1.67
CCDC163A0A0D9SF12 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.65□□□□□ -1.67
CCDC163A0A0D9SF12 MRPL49P2-201ENST00000521066 465 ntBASIC4.65□□□□□ -1.67
CCDC163A0A0D9SF12 AP006587.4-201ENST00000526053 529 ntBASIC4.65□□□□□ -1.67
CCDC163A0A0D9SF12 AC022690.1-201ENST00000526681 550 ntBASIC4.65□□□□□ -1.67
CCDC163A0A0D9SF12 RANP3-201ENST00000530970 276 ntBASIC4.65□□□□□ -1.67
CCDC163A0A0D9SF12 AC109635.4-202ENST00000531666 412 ntBASIC4.65□□□□□ -1.67
CCDC163A0A0D9SF12 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.65□□□□□ -1.67
CCDC163A0A0D9SF12 AC025884.1-201ENST00000556034 378 ntBASIC4.65□□□□□ -1.67
CCDC163A0A0D9SF12 AC106785.1-201ENST00000565935 262 ntBASIC4.65□□□□□ -1.67
CCDC163A0A0D9SF12 AC091135.1-201ENST00000585943 307 ntBASIC4.65□□□□□ -1.67
CCDC163A0A0D9SF12 IPO5P1-202ENST00000600039 287 ntBASIC4.65□□□□□ -1.67
CCDC163A0A0D9SF12 uc_338.32-201ENST00000615087 172 ntBASIC4.65□□□□□ -1.67
CCDC163A0A0D9SF12 AC090617.10-201ENST00000624308 134 ntBASIC4.65□□□□□ -1.67
CCDC163A0A0D9SF12 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.65□□□□□ -1.67
CCDC163A0A0D9SF12 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
CCDC163A0A0D9SF12 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.65□□□□□ -1.67
CCDC163A0A0D9SF12 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.65□□□□□ -1.67
CCDC163A0A0D9SF12 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CCDC163A0A0D9SF12 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
CCDC163A0A0D9SF12 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC163A0A0D9SF12 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
CCDC163A0A0D9SF12 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC163A0A0D9SF12 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
CCDC163A0A0D9SF12 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.64□□□□□ -1.67
CCDC163A0A0D9SF12 AC021146.4-201ENST00000309229 279 ntBASIC4.64□□□□□ -1.67
CCDC163A0A0D9SF12 RNU1-94P-201ENST00000362627 173 ntBASIC4.64□□□□□ -1.67
CCDC163A0A0D9SF12 MIR23A-201ENST00000385245 73 ntBASIC4.64□□□□□ -1.67
CCDC163A0A0D9SF12 MIR134-201ENST00000385258 73 ntBASIC4.64□□□□□ -1.67
CCDC163A0A0D9SF12 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.64□□□□□ -1.67
CCDC163A0A0D9SF12 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC163A0A0D9SF12 RPL23AP31-201ENST00000456160 467 ntBASIC4.64□□□□□ -1.67
CCDC163A0A0D9SF12 MTND1P11-201ENST00000456661 876 ntBASIC4.64□□□□□ -1.67
CCDC163A0A0D9SF12 snoU13.4-201ENST00000458916 104 ntBASIC4.64□□□□□ -1.67
CCDC163A0A0D9SF12 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC4.64□□□□□ -1.67
CCDC163A0A0D9SF12 RN7SL98P-201ENST00000462271 300 ntBASIC4.64□□□□□ -1.67
CCDC163A0A0D9SF12 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.64□□□□□ -1.67
CCDC163A0A0D9SF12 RPL31P13-201ENST00000484151 370 ntBASIC4.64□□□□□ -1.67
CCDC163A0A0D9SF12 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC4.64□□□□□ -1.67
CCDC163A0A0D9SF12 AP003730.1-201ENST00000524605 285 ntBASIC4.64□□□□□ -1.67
CCDC163A0A0D9SF12 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.64□□□□□ -1.67
CCDC163A0A0D9SF12 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.64□□□□□ -1.67
CCDC163A0A0D9SF12 BNIP3P6-201ENST00000549284 499 ntBASIC4.64□□□□□ -1.67
CCDC163A0A0D9SF12 AL355836.1-201ENST00000555951 870 ntBASIC4.64□□□□□ -1.67
CCDC163A0A0D9SF12 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC4.64□□□□□ -1.67
CCDC163A0A0D9SF12 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.64□□□□□ -1.67
CCDC163A0A0D9SF12 RPL23AP84-201ENST00000571193 464 ntBASIC4.64□□□□□ -1.67
CCDC163A0A0D9SF12 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
CCDC163A0A0D9SF12 AC007619.2-201ENST00000605743 379 ntBASIC4.64□□□□□ -1.67
CCDC163A0A0D9SF12 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC4.64□□□□□ -1.67
CCDC163A0A0D9SF12 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.64□□□□□ -1.67
CCDC163A0A0D9SF12 MIR492-201ENST00000638676 116 ntBASIC4.64□□□□□ -1.67
CCDC163A0A0D9SF12 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms