Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
GPC6Q9Y625 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
GPC6Q9Y625 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
GPC6Q9Y625 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
GPC6Q9Y625 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
GPC6Q9Y625 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.31□□□□□ -1.56
GPC6Q9Y625 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
GPC6Q9Y625 AC004817.4-201ENST00000602396 3625 ntBASIC5.31□□□□□ -1.56
GPC6Q9Y625 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
GPC6Q9Y625 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.31□□□□□ -1.56
GPC6Q9Y625 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.31□□□□□ -1.56
GPC6Q9Y625 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.31□□□□□ -1.56
GPC6Q9Y625 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
GPC6Q9Y625 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
GPC6Q9Y625 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
GPC6Q9Y625 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.3□□□□□ -1.56
GPC6Q9Y625 AP001148.1-201ENST00000624124 2359 ntBASIC5.3□□□□□ -1.56
GPC6Q9Y625 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
GPC6Q9Y625 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
GPC6Q9Y625 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.3□□□□□ -1.56
GPC6Q9Y625 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
GPC6Q9Y625 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.3□□□□□ -1.56
GPC6Q9Y625 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
GPC6Q9Y625 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
GPC6Q9Y625 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
GPC6Q9Y625 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.3□□□□□ -1.56
GPC6Q9Y625 Y_RNA.20-201ENST00000362479 113 ntBASIC5.3□□□□□ -1.56
GPC6Q9Y625 Y_RNA.29-201ENST00000362570 113 ntBASIC5.3□□□□□ -1.56
GPC6Q9Y625 Y_RNA.297-201ENST00000364950 91 ntBASIC5.3□□□□□ -1.56
GPC6Q9Y625 CRP-202ENST00000368110 667 ntTSL 3 BASIC5.3□□□□□ -1.56
GPC6Q9Y625 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
GPC6Q9Y625 RNU6-708P-201ENST00000384217 107 ntBASIC5.3□□□□□ -1.56
GPC6Q9Y625 Y_RNA.785-201ENST00000384290 109 ntBASIC5.3□□□□□ -1.56
GPC6Q9Y625 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
GPC6Q9Y625 SNORA69.1-201ENST00000390904 137 ntBASIC5.3□□□□□ -1.56
GPC6Q9Y625 MIR1203-201ENST00000408812 85 ntBASIC5.3□□□□□ -1.56
GPC6Q9Y625 RNU2-33P-201ENST00000410344 192 ntBASIC5.3□□□□□ -1.56
GPC6Q9Y625 RNU2-25P-201ENST00000411041 191 ntBASIC5.3□□□□□ -1.56
GPC6Q9Y625 AC063979.1-201ENST00000415539 377 ntBASIC5.3□□□□□ -1.56
GPC6Q9Y625 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
GPC6Q9Y625 C4BPAP2-201ENST00000428434 478 ntBASIC5.3□□□□□ -1.56
GPC6Q9Y625 AC126120.1-201ENST00000431082 470 ntBASIC5.3□□□□□ -1.56
GPC6Q9Y625 AL138899.2-201ENST00000439139 499 ntBASIC5.3□□□□□ -1.56
GPC6Q9Y625 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.3□□□□□ -1.56
GPC6Q9Y625 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.3□□□□□ -1.56
GPC6Q9Y625 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
GPC6Q9Y625 RPL37P6-202ENST00000464216 403 ntBASIC5.3□□□□□ -1.56
GPC6Q9Y625 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC5.3□□□□□ -1.56
GPC6Q9Y625 HMGN2P36-201ENST00000529541 409 ntBASIC5.3□□□□□ -1.56
GPC6Q9Y625 AC005363.1-201ENST00000530779 351 ntBASIC5.3□□□□□ -1.56
GPC6Q9Y625 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.3□□□□□ -1.56
GPC6Q9Y625 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
GPC6Q9Y625 AC022080.3-201ENST00000544433 482 ntBASIC5.3□□□□□ -1.56
GPC6Q9Y625 TRAV32-201ENST00000553993 340 ntBASIC5.3□□□□□ -1.56
GPC6Q9Y625 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
GPC6Q9Y625 AC009779.6-201ENST00000603972 165 ntBASIC5.3□□□□□ -1.56
GPC6Q9Y625 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
GPC6Q9Y625 TEX41-280ENST00000629185 591 ntTSL 5 BASIC5.3□□□□□ -1.56
GPC6Q9Y625 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
GPC6Q9Y625 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
GPC6Q9Y625 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
GPC6Q9Y625 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
GPC6Q9Y625 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
GPC6Q9Y625 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
GPC6Q9Y625 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
GPC6Q9Y625 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
GPC6Q9Y625 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.29□□□□□ -1.56
GPC6Q9Y625 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
GPC6Q9Y625 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
GPC6Q9Y625 RNA5SP500-201ENST00000364486 119 ntBASIC5.29□□□□□ -1.56
GPC6Q9Y625 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.29□□□□□ -1.56
GPC6Q9Y625 RNU6-1179P-201ENST00000384667 107 ntBASIC5.29□□□□□ -1.56
GPC6Q9Y625 MIR521-1-201ENST00000384902 87 ntBASIC5.29□□□□□ -1.56
GPC6Q9Y625 AC005042.1-201ENST00000393397 800 ntBASIC5.29□□□□□ -1.56
GPC6Q9Y625 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.29□□□□□ -1.56
GPC6Q9Y625 RNA5SP56-201ENST00000410277 118 ntBASIC5.29□□□□□ -1.56
GPC6Q9Y625 RNU2-43P-201ENST00000410306 190 ntBASIC5.29□□□□□ -1.56
GPC6Q9Y625 RNU6-121P-201ENST00000410525 99 ntBASIC5.29□□□□□ -1.56
GPC6Q9Y625 RNU2-71P-201ENST00000411395 189 ntBASIC5.29□□□□□ -1.56
GPC6Q9Y625 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.29□□□□□ -1.56
GPC6Q9Y625 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC5.29□□□□□ -1.56
GPC6Q9Y625 AC016712.1-201ENST00000431088 378 ntBASIC5.29□□□□□ -1.56
GPC6Q9Y625 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC5.29□□□□□ -1.56
GPC6Q9Y625 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC5.29□□□□□ -1.56
GPC6Q9Y625 RNA5SP103-201ENST00000459503 118 ntBASIC5.29□□□□□ -1.56
GPC6Q9Y625 RPL23AP2-201ENST00000471227 466 ntBASIC5.29□□□□□ -1.56
GPC6Q9Y625 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.29□□□□□ -1.56
GPC6Q9Y625 RN7SL570P-201ENST00000484405 292 ntBASIC5.29□□□□□ -1.56
GPC6Q9Y625 PPIAP19-201ENST00000486414 492 ntBASIC5.29□□□□□ -1.56
GPC6Q9Y625 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC5.29□□□□□ -1.56
GPC6Q9Y625 MRPS33P2-201ENST00000507850 322 ntBASIC5.29□□□□□ -1.56
GPC6Q9Y625 RNA5SP271-201ENST00000516700 88 ntBASIC5.29□□□□□ -1.56
GPC6Q9Y625 RN7SKP258-201ENST00000517151 304 ntBASIC5.29□□□□□ -1.56
GPC6Q9Y625 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC5.29□□□□□ -1.56
GPC6Q9Y625 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
GPC6Q9Y625 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.29□□□□□ -1.56
GPC6Q9Y625 FTX_2.1-201ENST00000618816 94 ntBASIC5.29□□□□□ -1.56
GPC6Q9Y625 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.29□□□□□ -1.56
GPC6Q9Y625 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
GPC6Q9Y625 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms