Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AC090888.1-201ENST00000561335 1141 ntBASIC2.52□□□□□ -2.01
RHBDD3Q9Y3P4 MIR4637-201ENST00000582405 84 ntBASIC2.52□□□□□ -2.01
RHBDD3Q9Y3P4 AC015871.2-201ENST00000603605 948 ntBASIC2.52□□□□□ -2.01
RHBDD3Q9Y3P4 AC012468.1-201ENST00000604888 430 ntBASIC2.52□□□□□ -2.01
RHBDD3Q9Y3P4 AC245517.5-201ENST00000611529 162 ntBASIC2.52□□□□□ -2.01
RHBDD3Q9Y3P4 AC006213.4-201ENST00000616184 634 ntBASIC2.52□□□□□ -2.01
RHBDD3Q9Y3P4 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.52□□□□□ -2.01
RHBDD3Q9Y3P4 AL596245.1-201ENST00000618994 362 ntBASIC2.52□□□□□ -2.01
RHBDD3Q9Y3P4 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.52□□□□□ -2.01
RHBDD3Q9Y3P4 Z99129.2-201ENST00000619967 314 ntBASIC2.52□□□□□ -2.01
RHBDD3Q9Y3P4 AC010338.1-201ENST00000621823 717 ntBASIC2.52□□□□□ -2.01
RHBDD3Q9Y3P4 AC009039.2-201ENST00000624524 529 ntBASIC2.52□□□□□ -2.01
RHBDD3Q9Y3P4 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC2.52□□□□□ -2.01
RHBDD3Q9Y3P4 MKKS-204ENST00000639674 192 ntBASIC2.52□□□□□ -2.01
RHBDD3Q9Y3P4 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.52□□□□□ -2.01
RHBDD3Q9Y3P4 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
RHBDD3Q9Y3P4 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
RHBDD3Q9Y3P4 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC2.51□□□□□ -2.01
RHBDD3Q9Y3P4 NACA3P-201ENST00000359690 648 ntBASIC2.51□□□□□ -2.01
RHBDD3Q9Y3P4 MIR422A-201ENST00000362286 90 ntBASIC2.51□□□□□ -2.01
RHBDD3Q9Y3P4 RNU6-236P-201ENST00000363886 106 ntBASIC2.51□□□□□ -2.01
RHBDD3Q9Y3P4 RPL22P22-201ENST00000395439 379 ntBASIC2.51□□□□□ -2.01
RHBDD3Q9Y3P4 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
RHBDD3Q9Y3P4 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.51□□□□□ -2.01
RHBDD3Q9Y3P4 SNORA11-201ENST00000408789 128 ntBASIC2.51□□□□□ -2.01
RHBDD3Q9Y3P4 AC092638.1-201ENST00000411966 1275 ntBASIC2.51□□□□□ -2.01
RHBDD3Q9Y3P4 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC2.51□□□□□ -2.01
RHBDD3Q9Y3P4 RPL7P44-201ENST00000424827 742 ntBASIC2.51□□□□□ -2.01
RHBDD3Q9Y3P4 OR4K11P-201ENST00000431829 904 ntBASIC2.51□□□□□ -2.01
RHBDD3Q9Y3P4 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC2.51□□□□□ -2.01
RHBDD3Q9Y3P4 RPS15AP7-201ENST00000439294 405 ntBASIC2.51□□□□□ -2.01
RHBDD3Q9Y3P4 BMI1P1-201ENST00000445879 941 ntBASIC2.51□□□□□ -2.01
RHBDD3Q9Y3P4 AL096829.2-201ENST00000446582 742 ntBASIC2.51□□□□□ -2.01
RHBDD3Q9Y3P4 RPS15AP27-201ENST00000449183 343 ntBASIC2.51□□□□□ -2.01
RHBDD3Q9Y3P4 GSTA11P-201ENST00000452866 669 ntBASIC2.51□□□□□ -2.01
RHBDD3Q9Y3P4 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.51□□□□□ -2.01
RHBDD3Q9Y3P4 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.51□□□□□ -2.01
RHBDD3Q9Y3P4 AC023424.2-201ENST00000493479 777 ntBASIC2.51□□□□□ -2.01
RHBDD3Q9Y3P4 CDC42P4-201ENST00000510507 563 ntBASIC2.51□□□□□ -2.01
RHBDD3Q9Y3P4 AC008716.1-201ENST00000511084 513 ntBASIC2.51□□□□□ -2.01
RHBDD3Q9Y3P4 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.51□□□□□ -2.01
RHBDD3Q9Y3P4 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC2.51□□□□□ -2.01
RHBDD3Q9Y3P4 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.51□□□□□ -2.01
RHBDD3Q9Y3P4 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.51□□□□□ -2.01
RHBDD3Q9Y3P4 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC2.51□□□□□ -2.01
RHBDD3Q9Y3P4 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC2.51□□□□□ -2.01
RHBDD3Q9Y3P4 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.51□□□□□ -2.01
RHBDD3Q9Y3P4 MIR3616-201ENST00000584070 92 ntBASIC2.51□□□□□ -2.01
RHBDD3Q9Y3P4 AC006504.3-201ENST00000586818 523 ntBASIC2.51□□□□□ -2.01
RHBDD3Q9Y3P4 AC012493.2-201ENST00000595083 291 ntBASIC2.51□□□□□ -2.01
RHBDD3Q9Y3P4 VN1R87P-201ENST00000596706 487 ntBASIC2.51□□□□□ -2.01
RHBDD3Q9Y3P4 AC006539.2-201ENST00000601729 572 ntBASIC2.51□□□□□ -2.01
RHBDD3Q9Y3P4 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC2.51□□□□□ -2.01
RHBDD3Q9Y3P4 AC013553.2-201ENST00000604244 589 ntBASIC2.51□□□□□ -2.01
RHBDD3Q9Y3P4 AC007179.3-201ENST00000604976 235 ntBASIC2.51□□□□□ -2.01
RHBDD3Q9Y3P4 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.51□□□□□ -2.01
RHBDD3Q9Y3P4 AC079395.3-201ENST00000615161 484 ntBASIC2.51□□□□□ -2.01
RHBDD3Q9Y3P4 AC091953.5-201ENST00000622919 233 ntBASIC2.51□□□□□ -2.01
RHBDD3Q9Y3P4 Z99496.1-201ENST00000469424 1477 ntBASIC2.51□□□□□ -2.01
RHBDD3Q9Y3P4 AL356473.1-201ENST00000406203 1408 ntBASIC2.51□□□□□ -2.01
RHBDD3Q9Y3P4 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
RHBDD3Q9Y3P4 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
RHBDD3Q9Y3P4 AC007785.2-201ENST00000598627 1916 ntBASIC2.5□□□□□ -2.01
RHBDD3Q9Y3P4 AC009487.2-201ENST00000420969 6821 ntBASIC2.5□□□□□ -2.01
RHBDD3Q9Y3P4 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
RHBDD3Q9Y3P4 SNORA68.1-201ENST00000364537 132 ntBASIC2.5□□□□□ -2.01
RHBDD3Q9Y3P4 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
RHBDD3Q9Y3P4 MTND4P13-201ENST00000402078 1023 ntBASIC2.5□□□□□ -2.01
RHBDD3Q9Y3P4 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.5□□□□□ -2.01
RHBDD3Q9Y3P4 AC022018.1-201ENST00000430685 241 ntBASIC2.5□□□□□ -2.01
RHBDD3Q9Y3P4 AC092427.1-201ENST00000439177 601 ntBASIC2.5□□□□□ -2.01
RHBDD3Q9Y3P4 FGF7P5-201ENST00000441829 291 ntBASIC2.5□□□□□ -2.01
RHBDD3Q9Y3P4 RPL39P40-201ENST00000445481 146 ntBASIC2.5□□□□□ -2.01
RHBDD3Q9Y3P4 MTCYBP3-201ENST00000445588 1137 ntBASIC2.5□□□□□ -2.01
RHBDD3Q9Y3P4 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC2.5□□□□□ -2.01
RHBDD3Q9Y3P4 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC2.5□□□□□ -2.01
RHBDD3Q9Y3P4 RN7SL297P-201ENST00000483161 293 ntBASIC2.5□□□□□ -2.01
RHBDD3Q9Y3P4 RPL23AP70-201ENST00000483361 460 ntBASIC2.5□□□□□ -2.01
RHBDD3Q9Y3P4 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.5□□□□□ -2.01
RHBDD3Q9Y3P4 AP002404.1-201ENST00000532005 451 ntBASIC2.5□□□□□ -2.01
RHBDD3Q9Y3P4 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.5□□□□□ -2.01
RHBDD3Q9Y3P4 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC2.5□□□□□ -2.01
RHBDD3Q9Y3P4 AL359198.2-201ENST00000611836 194 ntBASIC2.5□□□□□ -2.01
RHBDD3Q9Y3P4 AL450472.3-201ENST00000615578 367 ntBASIC2.5□□□□□ -2.01
RHBDD3Q9Y3P4 AC010975.3-201ENST00000618727 978 ntBASIC2.5□□□□□ -2.01
RHBDD3Q9Y3P4 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC2.5□□□□□ -2.01
RHBDD3Q9Y3P4 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.5□□□□□ -2.01
RHBDD3Q9Y3P4 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
RHBDD3Q9Y3P4 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.5□□□□□ -2.01
RHBDD3Q9Y3P4 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.5□□□□□ -2.01
RHBDD3Q9Y3P4 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
RHBDD3Q9Y3P4 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
RHBDD3Q9Y3P4 AL022578.1-201ENST00000439330 1433 ntBASIC2.5□□□□□ -2.01
RHBDD3Q9Y3P4 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
RHBDD3Q9Y3P4 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
RHBDD3Q9Y3P4 VTRNA1-1-201ENST00000363120 99 ntBASIC2.49□□□□□ -2.01
RHBDD3Q9Y3P4 RNU6-216P-201ENST00000363282 104 ntBASIC2.49□□□□□ -2.01
RHBDD3Q9Y3P4 SNORA9.2-201ENST00000365361 133 ntBASIC2.49□□□□□ -2.01
RHBDD3Q9Y3P4 MIR514A1-201ENST00000385133 98 ntBASIC2.49□□□□□ -2.01
RHBDD3Q9Y3P4 TAS2R15P-201ENST00000390674 928 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 125.6 ms