Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 RNU7-59P-201ENST00000459101 61 ntBASIC4.24□□□□□ -1.73
COL20A1Q9P218 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC4.24□□□□□ -1.73
COL20A1Q9P218 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.24□□□□□ -1.73
COL20A1Q9P218 AC010587.1-201ENST00000505809 469 ntBASIC4.24□□□□□ -1.73
COL20A1Q9P218 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.24□□□□□ -1.73
COL20A1Q9P218 AC022483.1-201ENST00000514020 567 ntBASIC4.24□□□□□ -1.73
COL20A1Q9P218 RNA5SP154-201ENST00000516193 111 ntBASIC4.24□□□□□ -1.73
COL20A1Q9P218 RNU6-798P-201ENST00000516912 103 ntBASIC4.24□□□□□ -1.73
COL20A1Q9P218 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.24□□□□□ -1.73
COL20A1Q9P218 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC4.24□□□□□ -1.73
COL20A1Q9P218 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.24□□□□□ -1.73
COL20A1Q9P218 AC008011.1-201ENST00000545989 227 ntBASIC4.24□□□□□ -1.73
COL20A1Q9P218 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.24□□□□□ -1.73
COL20A1Q9P218 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.24□□□□□ -1.73
COL20A1Q9P218 ZNF519P2-201ENST00000557032 169 ntBASIC4.24□□□□□ -1.73
COL20A1Q9P218 AC136619.2-201ENST00000563361 631 ntBASIC4.24□□□□□ -1.73
COL20A1Q9P218 AC012182.1-201ENST00000570133 895 ntBASIC4.24□□□□□ -1.73
COL20A1Q9P218 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC4.24□□□□□ -1.73
COL20A1Q9P218 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.24□□□□□ -1.73
COL20A1Q9P218 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.24□□□□□ -1.73
COL20A1Q9P218 MIR6130-201ENST00000619419 109 ntBASIC4.24□□□□□ -1.73
COL20A1Q9P218 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
COL20A1Q9P218 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
COL20A1Q9P218 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
COL20A1Q9P218 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
COL20A1Q9P218 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.24□□□□□ -1.73
COL20A1Q9P218 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
COL20A1Q9P218 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
COL20A1Q9P218 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
COL20A1Q9P218 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
COL20A1Q9P218 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
COL20A1Q9P218 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
COL20A1Q9P218 AC007823.1-201ENST00000569932 1566 ntBASIC4.23□□□□□ -1.73
COL20A1Q9P218 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.23□□□□□ -1.73
COL20A1Q9P218 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
COL20A1Q9P218 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
COL20A1Q9P218 SNORA63.1-201ENST00000362493 131 ntBASIC4.23□□□□□ -1.73
COL20A1Q9P218 RNU6-223P-201ENST00000362830 107 ntBASIC4.23□□□□□ -1.73
COL20A1Q9P218 RNY1P12-201ENST00000364251 105 ntBASIC4.23□□□□□ -1.73
COL20A1Q9P218 RN7SKP226-201ENST00000364912 300 ntBASIC4.23□□□□□ -1.73
COL20A1Q9P218 MIR19A-201ENST00000384878 82 ntBASIC4.23□□□□□ -1.73
COL20A1Q9P218 GSTA9P-201ENST00000406231 611 ntBASIC4.23□□□□□ -1.73
COL20A1Q9P218 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.23□□□□□ -1.73
COL20A1Q9P218 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC4.23□□□□□ -1.73
COL20A1Q9P218 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.23□□□□□ -1.73
COL20A1Q9P218 AC006946.1-201ENST00000429106 328 ntBASIC4.23□□□□□ -1.73
COL20A1Q9P218 TIMM9P1-201ENST00000436122 256 ntBASIC4.23□□□□□ -1.73
COL20A1Q9P218 HSPD1P21-201ENST00000436541 245 ntBASIC4.23□□□□□ -1.73
COL20A1Q9P218 FTH1P1-201ENST00000437933 532 ntBASIC4.23□□□□□ -1.73
COL20A1Q9P218 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4.23□□□□□ -1.73
COL20A1Q9P218 TPT1P14-201ENST00000448018 505 ntBASIC4.23□□□□□ -1.73
COL20A1Q9P218 MTCO3P20-201ENST00000454926 688 ntBASIC4.23□□□□□ -1.73
COL20A1Q9P218 RBM43P1-201ENST00000476891 1081 ntBASIC4.23□□□□□ -1.73
COL20A1Q9P218 AC114967.1-201ENST00000504890 259 ntBASIC4.23□□□□□ -1.73
COL20A1Q9P218 HMGN1P11-201ENST00000508668 303 ntBASIC4.23□□□□□ -1.73
COL20A1Q9P218 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.23□□□□□ -1.73
COL20A1Q9P218 RNU6-506P-201ENST00000516553 94 ntBASIC4.23□□□□□ -1.73
COL20A1Q9P218 AC107934.1-201ENST00000522215 217 ntBASIC4.23□□□□□ -1.73
COL20A1Q9P218 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC4.23□□□□□ -1.73
COL20A1Q9P218 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC4.23□□□□□ -1.73
COL20A1Q9P218 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.23□□□□□ -1.73
COL20A1Q9P218 AL592295.2-201ENST00000612578 206 ntBASIC4.23□□□□□ -1.73
COL20A1Q9P218 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.23□□□□□ -1.73
COL20A1Q9P218 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC4.23□□□□□ -1.73
COL20A1Q9P218 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
COL20A1Q9P218 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
COL20A1Q9P218 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
COL20A1Q9P218 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
COL20A1Q9P218 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
COL20A1Q9P218 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
COL20A1Q9P218 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.23□□□□□ -1.73
COL20A1Q9P218 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.22□□□□□ -1.73
COL20A1Q9P218 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
COL20A1Q9P218 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
COL20A1Q9P218 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
COL20A1Q9P218 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
COL20A1Q9P218 RNU6-432P-201ENST00000384196 109 ntBASIC4.22□□□□□ -1.73
COL20A1Q9P218 RNU6-754P-201ENST00000391166 107 ntBASIC4.22□□□□□ -1.73
COL20A1Q9P218 HSPD1P16-201ENST00000402302 394 ntBASIC4.22□□□□□ -1.73
COL20A1Q9P218 RNU6ATAC25P-201ENST00000408798 117 ntBASIC4.22□□□□□ -1.73
COL20A1Q9P218 UBE2V1P10-201ENST00000414685 269 ntBASIC4.22□□□□□ -1.73
COL20A1Q9P218 EI24P1-201ENST00000416584 867 ntBASIC4.22□□□□□ -1.73
COL20A1Q9P218 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.22□□□□□ -1.73
COL20A1Q9P218 USP9YP36-201ENST00000424581 829 ntBASIC4.22□□□□□ -1.73
COL20A1Q9P218 OR4K11P-201ENST00000431829 904 ntBASIC4.22□□□□□ -1.73
COL20A1Q9P218 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC4.22□□□□□ -1.73
COL20A1Q9P218 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC4.22□□□□□ -1.73
COL20A1Q9P218 FGF7P3-201ENST00000454645 303 ntBASIC4.22□□□□□ -1.73
COL20A1Q9P218 AL359385.1-201ENST00000456509 365 ntBASIC4.22□□□□□ -1.73
COL20A1Q9P218 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.22□□□□□ -1.73
COL20A1Q9P218 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.22□□□□□ -1.73
COL20A1Q9P218 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.22□□□□□ -1.73
COL20A1Q9P218 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC4.22□□□□□ -1.73
COL20A1Q9P218 AP004371.1-201ENST00000525240 214 ntBASIC4.22□□□□□ -1.73
COL20A1Q9P218 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.22□□□□□ -1.73
COL20A1Q9P218 AP000857.1-201ENST00000532151 543 ntBASIC4.22□□□□□ -1.73
COL20A1Q9P218 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC4.22□□□□□ -1.73
COL20A1Q9P218 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.22□□□□□ -1.73
COL20A1Q9P218 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.22□□□□□ -1.73
COL20A1Q9P218 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 186.7 ms