Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 AC015871.2-201ENST00000603605 948 ntBASIC3.68□□□□□ -1.82
HCN3Q9P1Z3 AC106900.2-201ENST00000604994 317 ntBASIC3.68□□□□□ -1.82
HCN3Q9P1Z3 AL139286.2-201ENST00000606838 396 ntBASIC3.68□□□□□ -1.82
HCN3Q9P1Z3 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.68□□□□□ -1.82
HCN3Q9P1Z3 AC103591.3-201ENST00000608684 209 ntBASIC3.68□□□□□ -1.82
HCN3Q9P1Z3 AP002826.1-201ENST00000608835 315 ntBASIC3.68□□□□□ -1.82
HCN3Q9P1Z3 AC006566.1-201ENST00000608943 513 ntBASIC3.68□□□□□ -1.82
HCN3Q9P1Z3 AC103710.1-201ENST00000610003 901 ntBASIC3.68□□□□□ -1.82
HCN3Q9P1Z3 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HCN3Q9P1Z3 AC008121.2-201ENST00000614647 523 ntBASIC3.68□□□□□ -1.82
HCN3Q9P1Z3 AP001506.1-201ENST00000615444 211 ntBASIC3.68□□□□□ -1.82
HCN3Q9P1Z3 AC092656.1-203ENST00000624134 423 ntBASIC3.68□□□□□ -1.82
HCN3Q9P1Z3 AL136313.1-201ENST00000624804 202 ntBASIC3.68□□□□□ -1.82
HCN3Q9P1Z3 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
HCN3Q9P1Z3 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HCN3Q9P1Z3 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
HCN3Q9P1Z3 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HCN3Q9P1Z3 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.68□□□□□ -1.82
HCN3Q9P1Z3 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.67□□□□□ -1.82
HCN3Q9P1Z3 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.67□□□□□ -1.82
HCN3Q9P1Z3 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
HCN3Q9P1Z3 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.67□□□□□ -1.82
HCN3Q9P1Z3 GNG5P1-201ENST00000255500 204 ntBASIC3.67□□□□□ -1.82
HCN3Q9P1Z3 RNU4-24P-201ENST00000364565 139 ntBASIC3.67□□□□□ -1.82
HCN3Q9P1Z3 SNORA75-201ENST00000384158 137 ntBASIC3.67□□□□□ -1.82
HCN3Q9P1Z3 MIR30B-201ENST00000384850 88 ntBASIC3.67□□□□□ -1.82
HCN3Q9P1Z3 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.67□□□□□ -1.82
HCN3Q9P1Z3 AC019097.1-201ENST00000424783 735 ntBASIC3.67□□□□□ -1.82
HCN3Q9P1Z3 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.67□□□□□ -1.82
HCN3Q9P1Z3 AL589872.1-201ENST00000426602 288 ntBASIC3.67□□□□□ -1.82
HCN3Q9P1Z3 AC119618.1-201ENST00000434191 222 ntBASIC3.67□□□□□ -1.82
HCN3Q9P1Z3 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HCN3Q9P1Z3 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.67□□□□□ -1.82
HCN3Q9P1Z3 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.67□□□□□ -1.82
HCN3Q9P1Z3 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.67□□□□□ -1.82
HCN3Q9P1Z3 PGBD4P3-201ENST00000440731 581 ntBASIC3.67□□□□□ -1.82
HCN3Q9P1Z3 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.67□□□□□ -1.82
HCN3Q9P1Z3 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.67□□□□□ -1.82
HCN3Q9P1Z3 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.67□□□□□ -1.82
HCN3Q9P1Z3 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.67□□□□□ -1.82
HCN3Q9P1Z3 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.67□□□□□ -1.82
HCN3Q9P1Z3 AC020593.1-201ENST00000507399 299 ntBASIC3.67□□□□□ -1.82
HCN3Q9P1Z3 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3.67□□□□□ -1.82
HCN3Q9P1Z3 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HCN3Q9P1Z3 AC079140.3-201ENST00000511111 550 ntBASIC3.67□□□□□ -1.82
HCN3Q9P1Z3 MTND3P5-201ENST00000512798 333 ntBASIC3.67□□□□□ -1.82
HCN3Q9P1Z3 RNU6-390P-201ENST00000516259 103 ntBASIC3.67□□□□□ -1.82
HCN3Q9P1Z3 SNORA31.22-201ENST00000517204 135 ntBASIC3.67□□□□□ -1.82
HCN3Q9P1Z3 AC022695.1-201ENST00000522089 237 ntBASIC3.67□□□□□ -1.82
HCN3Q9P1Z3 RFPL1S-203ENST00000539579 330 ntBASIC3.67□□□□□ -1.82
HCN3Q9P1Z3 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.67□□□□□ -1.82
HCN3Q9P1Z3 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.67□□□□□ -1.82
HCN3Q9P1Z3 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.67□□□□□ -1.82
HCN3Q9P1Z3 AC008277.2-201ENST00000605196 797 ntBASIC3.67□□□□□ -1.82
HCN3Q9P1Z3 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.67□□□□□ -1.82
HCN3Q9P1Z3 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.67□□□□□ -1.82
HCN3Q9P1Z3 AC008498.1-201ENST00000613012 531 ntBASIC3.67□□□□□ -1.82
HCN3Q9P1Z3 uc_338.32-201ENST00000615087 172 ntBASIC3.67□□□□□ -1.82
HCN3Q9P1Z3 AC006338.1-201ENST00000618453 749 ntBASIC3.67□□□□□ -1.82
HCN3Q9P1Z3 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.67□□□□□ -1.82
HCN3Q9P1Z3 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.67□□□□□ -1.82
HCN3Q9P1Z3 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.67□□□□□ -1.82
HCN3Q9P1Z3 AC092104.1-201ENST00000497346 1441 ntBASIC3.67□□□□□ -1.82
HCN3Q9P1Z3 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HCN3Q9P1Z3 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HCN3Q9P1Z3 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HCN3Q9P1Z3 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HCN3Q9P1Z3 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HCN3Q9P1Z3 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.66□□□□□ -1.82
HCN3Q9P1Z3 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
HCN3Q9P1Z3 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.66□□□□□ -1.82
HCN3Q9P1Z3 BDP1P-201ENST00000582658 1990 ntBASIC3.66□□□□□ -1.82
HCN3Q9P1Z3 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3.66□□□□□ -1.82
HCN3Q9P1Z3 Y_RNA.559-201ENST00000384686 107 ntBASIC3.66□□□□□ -1.82
HCN3Q9P1Z3 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
HCN3Q9P1Z3 RPS3AP36-201ENST00000398190 775 ntBASIC3.66□□□□□ -1.82
HCN3Q9P1Z3 TXNP7-201ENST00000406296 293 ntBASIC3.66□□□□□ -1.82
HCN3Q9P1Z3 Z98941.1-201ENST00000407764 100 ntBASIC3.66□□□□□ -1.82
HCN3Q9P1Z3 RNA5SP107-201ENST00000411358 122 ntBASIC3.66□□□□□ -1.82
HCN3Q9P1Z3 CYCSP19-201ENST00000411715 316 ntBASIC3.66□□□□□ -1.82
HCN3Q9P1Z3 RPL21P24-201ENST00000413752 448 ntBASIC3.66□□□□□ -1.82
HCN3Q9P1Z3 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.66□□□□□ -1.82
HCN3Q9P1Z3 HMGB3P23-201ENST00000414981 585 ntBASIC3.66□□□□□ -1.82
HCN3Q9P1Z3 CDK8P2-201ENST00000415020 547 ntBASIC3.66□□□□□ -1.82
HCN3Q9P1Z3 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.66□□□□□ -1.82
HCN3Q9P1Z3 AC008850.1-201ENST00000427546 362 ntBASIC3.66□□□□□ -1.82
HCN3Q9P1Z3 ISCA1P6-201ENST00000427740 390 ntBASIC3.66□□□□□ -1.82
HCN3Q9P1Z3 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.66□□□□□ -1.82
HCN3Q9P1Z3 RPL7L1P10-201ENST00000427790 463 ntBASIC3.66□□□□□ -1.82
HCN3Q9P1Z3 AC011742.1-201ENST00000431448 434 ntBASIC3.66□□□□□ -1.82
HCN3Q9P1Z3 Z74696.2-201ENST00000436514 498 ntBASIC3.66□□□□□ -1.82
HCN3Q9P1Z3 HMGB1P12-201ENST00000438594 598 ntBASIC3.66□□□□□ -1.82
HCN3Q9P1Z3 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.66□□□□□ -1.82
HCN3Q9P1Z3 AL662791.1-201ENST00000441992 928 ntBASIC3.66□□□□□ -1.82
HCN3Q9P1Z3 USP9YP15-201ENST00000442391 422 ntBASIC3.66□□□□□ -1.82
HCN3Q9P1Z3 AC244505.5-201ENST00000443639 207 ntBASIC3.66□□□□□ -1.82
HCN3Q9P1Z3 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HCN3Q9P1Z3 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HCN3Q9P1Z3 AC010587.1-201ENST00000505809 469 ntBASIC3.66□□□□□ -1.82
HCN3Q9P1Z3 HMGB3P15-201ENST00000507326 574 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms