Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.61□□□□□ -1.83
ECHDC1Q9NTX5 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.61□□□□□ -1.83
ECHDC1Q9NTX5 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC3.61□□□□□ -1.83
ECHDC1Q9NTX5 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.61□□□□□ -1.83
ECHDC1Q9NTX5 OR5BM1P-201ENST00000512021 366 ntBASIC3.61□□□□□ -1.83
ECHDC1Q9NTX5 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC3.61□□□□□ -1.83
ECHDC1Q9NTX5 ZNF705CP-201ENST00000530515 889 ntBASIC3.61□□□□□ -1.83
ECHDC1Q9NTX5 AC092470.1-201ENST00000546187 132 ntBASIC3.61□□□□□ -1.83
ECHDC1Q9NTX5 H3F3AP1-201ENST00000559984 334 ntBASIC3.61□□□□□ -1.83
ECHDC1Q9NTX5 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC3.61□□□□□ -1.83
ECHDC1Q9NTX5 AC006270.2-201ENST00000578523 652 ntBASIC3.61□□□□□ -1.83
ECHDC1Q9NTX5 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.61□□□□□ -1.83
ECHDC1Q9NTX5 VN1R92P-201ENST00000598511 928 ntBASIC3.61□□□□□ -1.83
ECHDC1Q9NTX5 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
ECHDC1Q9NTX5 AL162274.2-201ENST00000614406 332 ntBASIC3.61□□□□□ -1.83
ECHDC1Q9NTX5 AC099063.3-201ENST00000642066 185 ntBASIC3.61□□□□□ -1.83
ECHDC1Q9NTX5 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.61□□□□□ -1.83
ECHDC1Q9NTX5 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.61□□□□□ -1.83
ECHDC1Q9NTX5 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
ECHDC1Q9NTX5 MTND4P16-201ENST00000466108 1367 ntBASIC3.61□□□□□ -1.83
ECHDC1Q9NTX5 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
ECHDC1Q9NTX5 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
ECHDC1Q9NTX5 RNU5A-2P-201ENST00000384337 116 ntBASIC3.6□□□□□ -1.83
ECHDC1Q9NTX5 RNU6-952P-201ENST00000391164 108 ntBASIC3.6□□□□□ -1.83
ECHDC1Q9NTX5 SNORA26.8-201ENST00000391306 124 ntBASIC3.6□□□□□ -1.83
ECHDC1Q9NTX5 AL133384.1-201ENST00000412744 351 ntBASIC3.6□□□□□ -1.83
ECHDC1Q9NTX5 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.6□□□□□ -1.83
ECHDC1Q9NTX5 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.6□□□□□ -1.83
ECHDC1Q9NTX5 OR51AB1P-201ENST00000429046 620 ntBASIC3.6□□□□□ -1.83
ECHDC1Q9NTX5 AL035407.1-201ENST00000429211 571 ntBASIC3.6□□□□□ -1.83
ECHDC1Q9NTX5 AL589823.1-201ENST00000429577 183 ntBASIC3.6□□□□□ -1.83
ECHDC1Q9NTX5 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.6□□□□□ -1.83
ECHDC1Q9NTX5 MTCO2P16-201ENST00000436962 677 ntBASIC3.6□□□□□ -1.83
ECHDC1Q9NTX5 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.6□□□□□ -1.83
ECHDC1Q9NTX5 RPL37P4-201ENST00000448908 268 ntBASIC3.6□□□□□ -1.83
ECHDC1Q9NTX5 MTND2P19-201ENST00000449129 1012 ntBASIC3.6□□□□□ -1.83
ECHDC1Q9NTX5 HMGB3P8-201ENST00000449709 577 ntBASIC3.6□□□□□ -1.83
ECHDC1Q9NTX5 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.6□□□□□ -1.83
ECHDC1Q9NTX5 MTCO3P11-201ENST00000455103 774 ntBASIC3.6□□□□□ -1.83
ECHDC1Q9NTX5 AC097493.1-201ENST00000463958 372 ntBASIC3.6□□□□□ -1.83
ECHDC1Q9NTX5 S100A11P2-201ENST00000467589 312 ntBASIC3.6□□□□□ -1.83
ECHDC1Q9NTX5 AC078817.1-201ENST00000492623 435 ntBASIC3.6□□□□□ -1.83
ECHDC1Q9NTX5 AC092045.1-201ENST00000495716 1231 ntBASIC3.6□□□□□ -1.83
ECHDC1Q9NTX5 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC3.6□□□□□ -1.83
ECHDC1Q9NTX5 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
ECHDC1Q9NTX5 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.6□□□□□ -1.83
ECHDC1Q9NTX5 RNU6-678P-201ENST00000516832 109 ntBASIC3.6□□□□□ -1.83
ECHDC1Q9NTX5 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC3.6□□□□□ -1.83
ECHDC1Q9NTX5 AC007115.1-201ENST00000546853 234 ntBASIC3.6□□□□□ -1.83
ECHDC1Q9NTX5 AC008127.2-201ENST00000549925 1075 ntBASIC3.6□□□□□ -1.83
ECHDC1Q9NTX5 CBX3P5-201ENST00000552017 521 ntBASIC3.6□□□□□ -1.83
ECHDC1Q9NTX5 AC012414.6-201ENST00000568241 401 ntBASIC3.6□□□□□ -1.83
ECHDC1Q9NTX5 MIR4644-201ENST00000579929 84 ntBASIC3.6□□□□□ -1.83
ECHDC1Q9NTX5 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC3.6□□□□□ -1.83
ECHDC1Q9NTX5 MIR4637-201ENST00000582405 84 ntBASIC3.6□□□□□ -1.83
ECHDC1Q9NTX5 AC015871.2-201ENST00000603605 948 ntBASIC3.6□□□□□ -1.83
ECHDC1Q9NTX5 AC007566.2-201ENST00000603642 413 ntBASIC3.6□□□□□ -1.83
ECHDC1Q9NTX5 AC025588.3-201ENST00000604182 274 ntBASIC3.6□□□□□ -1.83
ECHDC1Q9NTX5 AC005000.2-201ENST00000605468 310 ntBASIC3.6□□□□□ -1.83
ECHDC1Q9NTX5 AC135507.1-201ENST00000607214 561 ntBASIC3.6□□□□□ -1.83
ECHDC1Q9NTX5 Z69908.1-201ENST00000622603 247 ntBASIC3.6□□□□□ -1.83
ECHDC1Q9NTX5 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
ECHDC1Q9NTX5 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.6□□□□□ -1.83
ECHDC1Q9NTX5 OR4G11P-202ENST00000642116 1414 ntBASIC3.6□□□□□ -1.83
ECHDC1Q9NTX5 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.59□□□□□ -1.83
ECHDC1Q9NTX5 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
ECHDC1Q9NTX5 AC000403.1-201ENST00000613696 3585 ntBASIC3.59□□□□□ -1.83
ECHDC1Q9NTX5 RNA5SP88-201ENST00000365560 109 ntBASIC3.59□□□□□ -1.83
ECHDC1Q9NTX5 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.59□□□□□ -1.83
ECHDC1Q9NTX5 MT-TH-201ENST00000387441 69 ntBASIC3.59□□□□□ -1.83
ECHDC1Q9NTX5 SNORA48.5-201ENST00000391143 135 ntBASIC3.59□□□□□ -1.83
ECHDC1Q9NTX5 U3.42-201ENST00000408746 214 ntBASIC3.59□□□□□ -1.83
ECHDC1Q9NTX5 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC3.59□□□□□ -1.83
ECHDC1Q9NTX5 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.59□□□□□ -1.83
ECHDC1Q9NTX5 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.59□□□□□ -1.83
ECHDC1Q9NTX5 AL590103.1-201ENST00000434488 307 ntBASIC3.59□□□□□ -1.83
ECHDC1Q9NTX5 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.59□□□□□ -1.83
ECHDC1Q9NTX5 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
ECHDC1Q9NTX5 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.59□□□□□ -1.83
ECHDC1Q9NTX5 TRIM60P18-201ENST00000441518 828 ntBASIC3.59□□□□□ -1.83
ECHDC1Q9NTX5 RPL23AP33-201ENST00000442301 452 ntBASIC3.59□□□□□ -1.83
ECHDC1Q9NTX5 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.59□□□□□ -1.83
ECHDC1Q9NTX5 AC005297.2-201ENST00000450430 606 ntBASIC3.59□□□□□ -1.83
ECHDC1Q9NTX5 MEMO1P3-201ENST00000459811 302 ntBASIC3.59□□□□□ -1.83
ECHDC1Q9NTX5 AC092754.2-201ENST00000463506 460 ntBASIC3.59□□□□□ -1.83
ECHDC1Q9NTX5 AC146507.1-201ENST00000468335 354 ntBASIC3.59□□□□□ -1.83
ECHDC1Q9NTX5 RPS29P2-201ENST00000479278 136 ntBASIC3.59□□□□□ -1.83
ECHDC1Q9NTX5 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.59□□□□□ -1.83
ECHDC1Q9NTX5 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC3.59□□□□□ -1.83
ECHDC1Q9NTX5 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
ECHDC1Q9NTX5 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.59□□□□□ -1.83
ECHDC1Q9NTX5 MTCO3P44-201ENST00000510977 541 ntBASIC3.59□□□□□ -1.83
ECHDC1Q9NTX5 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.59□□□□□ -1.83
ECHDC1Q9NTX5 MTND5P13-201ENST00000513046 1079 ntBASIC3.59□□□□□ -1.83
ECHDC1Q9NTX5 SCARNA13-201ENST00000516672 275 ntBASIC3.59□□□□□ -1.83
ECHDC1Q9NTX5 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.59□□□□□ -1.83
ECHDC1Q9NTX5 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
ECHDC1Q9NTX5 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
ECHDC1Q9NTX5 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.59□□□□□ -1.83
ECHDC1Q9NTX5 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms