Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.7□□□□□ -1.5
PRDM9Q9NQV7 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PRDM9Q9NQV7 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PRDM9Q9NQV7 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.7□□□□□ -1.5
PRDM9Q9NQV7 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
PRDM9Q9NQV7 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PRDM9Q9NQV7 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.7□□□□□ -1.5
PRDM9Q9NQV7 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
PRDM9Q9NQV7 Y_RNA.215-201ENST00000364204 112 ntBASIC5.7□□□□□ -1.5
PRDM9Q9NQV7 Y_RNA.308-201ENST00000365043 101 ntBASIC5.7□□□□□ -1.5
PRDM9Q9NQV7 RNU6-1289P-201ENST00000384431 106 ntBASIC5.7□□□□□ -1.5
PRDM9Q9NQV7 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
PRDM9Q9NQV7 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC5.7□□□□□ -1.5
PRDM9Q9NQV7 REREP1Y-201ENST00000422655 198 ntBASIC5.7□□□□□ -1.5
PRDM9Q9NQV7 AL358472.1-201ENST00000431295 329 ntBASIC5.7□□□□□ -1.5
PRDM9Q9NQV7 HSPD1P21-201ENST00000436541 245 ntBASIC5.7□□□□□ -1.5
PRDM9Q9NQV7 REREP2Y-201ENST00000439103 200 ntBASIC5.7□□□□□ -1.5
PRDM9Q9NQV7 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.7□□□□□ -1.5
PRDM9Q9NQV7 RN7SL189P-201ENST00000468631 289 ntBASIC5.7□□□□□ -1.5
PRDM9Q9NQV7 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC5.7□□□□□ -1.5
PRDM9Q9NQV7 SNORA27.4-201ENST00000516650 95 ntBASIC5.7□□□□□ -1.5
PRDM9Q9NQV7 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC5.7□□□□□ -1.5
PRDM9Q9NQV7 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC5.7□□□□□ -1.5
PRDM9Q9NQV7 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.7□□□□□ -1.5
PRDM9Q9NQV7 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.7□□□□□ -1.5
PRDM9Q9NQV7 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.7□□□□□ -1.5
PRDM9Q9NQV7 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC5.7□□□□□ -1.5
PRDM9Q9NQV7 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.7□□□□□ -1.5
PRDM9Q9NQV7 SRGNP1-201ENST00000603392 451 ntBASIC5.7□□□□□ -1.5
PRDM9Q9NQV7 B3GNTL1P2-201ENST00000603673 288 ntBASIC5.7□□□□□ -1.5
PRDM9Q9NQV7 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.7□□□□□ -1.5
PRDM9Q9NQV7 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC5.7□□□□□ -1.5
PRDM9Q9NQV7 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.7□□□□□ -1.5
PRDM9Q9NQV7 Z99571.1-201ENST00000636677 394 ntBASIC5.7□□□□□ -1.5
PRDM9Q9NQV7 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.7□□□□□ -1.5
PRDM9Q9NQV7 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PRDM9Q9NQV7 AC092070.2-203ENST00000598377 3644 ntBASIC5.7□□□□□ -1.5
PRDM9Q9NQV7 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PRDM9Q9NQV7 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PRDM9Q9NQV7 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.7□□□□□ -1.5
PRDM9Q9NQV7 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PRDM9Q9NQV7 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PRDM9Q9NQV7 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
PRDM9Q9NQV7 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PRDM9Q9NQV7 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
PRDM9Q9NQV7 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PRDM9Q9NQV7 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PRDM9Q9NQV7 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
PRDM9Q9NQV7 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PRDM9Q9NQV7 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
PRDM9Q9NQV7 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.69□□□□□ -1.5
PRDM9Q9NQV7 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.69□□□□□ -1.5
PRDM9Q9NQV7 RNU6-227P-201ENST00000362865 103 ntBASIC5.69□□□□□ -1.5
PRDM9Q9NQV7 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
PRDM9Q9NQV7 RPL21P67-201ENST00000402896 478 ntBASIC5.69□□□□□ -1.5
PRDM9Q9NQV7 DPPA2P3-201ENST00000411853 655 ntBASIC5.69□□□□□ -1.5
PRDM9Q9NQV7 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.69□□□□□ -1.5
PRDM9Q9NQV7 CYCSP51-201ENST00000443545 318 ntBASIC5.69□□□□□ -1.5
PRDM9Q9NQV7 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PRDM9Q9NQV7 AC090804.1-201ENST00000448870 490 ntBASIC5.69□□□□□ -1.5
PRDM9Q9NQV7 AC023141.9-201ENST00000458734 412 ntBASIC5.69□□□□□ -1.5
PRDM9Q9NQV7 SRI-210ENST00000490437 570 ntTSL 2 BASIC5.69□□□□□ -1.5
PRDM9Q9NQV7 AC005840.1-201ENST00000498412 377 ntBASIC5.69□□□□□ -1.5
PRDM9Q9NQV7 RNU5F-8P-201ENST00000515941 111 ntBASIC5.69□□□□□ -1.5
PRDM9Q9NQV7 RNU6-1095P-201ENST00000516148 108 ntBASIC5.69□□□□□ -1.5
PRDM9Q9NQV7 RN7SKP238-201ENST00000516483 249 ntBASIC5.69□□□□□ -1.5
PRDM9Q9NQV7 MIR5692C2-201ENST00000577959 77 ntBASIC5.69□□□□□ -1.5
PRDM9Q9NQV7 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.69□□□□□ -1.5
PRDM9Q9NQV7 MIR132-201ENST00000591554 101 ntBASIC5.69□□□□□ -1.5
PRDM9Q9NQV7 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC5.69□□□□□ -1.5
PRDM9Q9NQV7 AC073869.8-201ENST00000641806 335 ntBASIC5.69□□□□□ -1.5
PRDM9Q9NQV7 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PRDM9Q9NQV7 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.69□□□□□ -1.5
PRDM9Q9NQV7 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.69□□□□□ -1.5
PRDM9Q9NQV7 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
PRDM9Q9NQV7 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.69□□□□□ -1.5
PRDM9Q9NQV7 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
PRDM9Q9NQV7 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
PRDM9Q9NQV7 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PRDM9Q9NQV7 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
PRDM9Q9NQV7 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PRDM9Q9NQV7 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PRDM9Q9NQV7 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PRDM9Q9NQV7 AL451142.2-201ENST00000429076 2090 ntBASIC5.68□□□□□ -1.5
PRDM9Q9NQV7 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
PRDM9Q9NQV7 AC005725.1-201ENST00000577346 2607 ntBASIC5.68□□□□□ -1.5
PRDM9Q9NQV7 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PRDM9Q9NQV7 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.68□□□□□ -1.5
PRDM9Q9NQV7 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
PRDM9Q9NQV7 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PRDM9Q9NQV7 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PRDM9Q9NQV7 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PRDM9Q9NQV7 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
PRDM9Q9NQV7 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.68□□□□□ -1.5
PRDM9Q9NQV7 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PRDM9Q9NQV7 FAM91A3P-201ENST00000456826 2544 ntBASIC5.68□□□□□ -1.5
PRDM9Q9NQV7 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PRDM9Q9NQV7 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.68□□□□□ -1.5
PRDM9Q9NQV7 MIR410-201ENST00000362222 80 ntBASIC5.68□□□□□ -1.5
PRDM9Q9NQV7 Y_RNA.33-201ENST00000362591 102 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms