Protein–RNA interactions for Protein: Q9NQ69

LHX9, LIM/homeobox protein Lhx9, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX9Q9NQ69 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.62□□□□□ -1.99
LHX9Q9NQ69 HMGB3P15-201ENST00000507326 574 ntBASIC2.62□□□□□ -1.99
LHX9Q9NQ69 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC2.62□□□□□ -1.99
LHX9Q9NQ69 AC006445.2-201ENST00000510061 472 ntBASIC2.62□□□□□ -1.99
LHX9Q9NQ69 AC010486.1-201ENST00000511793 424 ntBASIC2.62□□□□□ -1.99
LHX9Q9NQ69 AC110760.3-202ENST00000515177 371 ntBASIC2.62□□□□□ -1.99
LHX9Q9NQ69 RNU6-1225P-201ENST00000516336 65 ntBASIC2.62□□□□□ -1.99
LHX9Q9NQ69 RN7SKP31-201ENST00000516354 278 ntBASIC2.62□□□□□ -1.99
LHX9Q9NQ69 PTK2-220ENST00000520151 573 ntTSL 4 BASIC2.62□□□□□ -1.99
LHX9Q9NQ69 ZNF705CP-201ENST00000530515 889 ntBASIC2.62□□□□□ -1.99
LHX9Q9NQ69 AL133271.1-201ENST00000538229 291 ntBASIC2.62□□□□□ -1.99
LHX9Q9NQ69 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.62□□□□□ -1.99
LHX9Q9NQ69 SYF2P1-201ENST00000550658 413 ntBASIC2.62□□□□□ -1.99
LHX9Q9NQ69 MTCYBP27-201ENST00000555160 670 ntBASIC2.62□□□□□ -1.99
LHX9Q9NQ69 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC2.62□□□□□ -1.99
LHX9Q9NQ69 SULT1C2P1-202ENST00000562418 459 ntBASIC2.62□□□□□ -1.99
LHX9Q9NQ69 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC2.62□□□□□ -1.99
LHX9Q9NQ69 AP001521.1-201ENST00000609150 300 ntBASIC2.62□□□□□ -1.99
LHX9Q9NQ69 AL359198.2-201ENST00000611836 194 ntBASIC2.62□□□□□ -1.99
LHX9Q9NQ69 AC023158.2-201ENST00000614876 543 ntBASIC2.62□□□□□ -1.99
LHX9Q9NQ69 AC006386.1-201ENST00000619436 415 ntBASIC2.62□□□□□ -1.99
LHX9Q9NQ69 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.62□□□□□ -1.99
LHX9Q9NQ69 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.62□□□□□ -1.99
LHX9Q9NQ69 MKKS-204ENST00000639674 192 ntBASIC2.62□□□□□ -1.99
LHX9Q9NQ69 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
LHX9Q9NQ69 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.62□□□□□ -1.99
LHX9Q9NQ69 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.62□□□□□ -1.99
LHX9Q9NQ69 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.62□□□□□ -1.99
LHX9Q9NQ69 PABPC1P7-201ENST00000413177 1513 ntBASIC2.62□□□□□ -1.99
LHX9Q9NQ69 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.62□□□□□ -1.99
LHX9Q9NQ69 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.62□□□□□ -1.99
LHX9Q9NQ69 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.62□□□□□ -1.99
LHX9Q9NQ69 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC2.61□□□□□ -1.99
LHX9Q9NQ69 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
LHX9Q9NQ69 AL359693.1-201ENST00000614959 2407 ntBASIC2.61□□□□□ -1.99
LHX9Q9NQ69 AL157700.1-201ENST00000561973 1432 ntBASIC2.61□□□□□ -1.99
LHX9Q9NQ69 AC099786.3-201ENST00000565735 1410 ntBASIC2.61□□□□□ -1.99
LHX9Q9NQ69 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
LHX9Q9NQ69 AL672167.1-206ENST00000356293 943 ntBASIC2.61□□□□□ -1.99
LHX9Q9NQ69 RNU4-82P-201ENST00000362443 140 ntBASIC2.61□□□□□ -1.99
LHX9Q9NQ69 RNVU1-3-201ENST00000364313 161 ntBASIC2.61□□□□□ -1.99
LHX9Q9NQ69 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.61□□□□□ -1.99
LHX9Q9NQ69 RNU6-413P-201ENST00000384115 107 ntBASIC2.61□□□□□ -1.99
LHX9Q9NQ69 MIR34A-201ENST00000385130 110 ntBASIC2.61□□□□□ -1.99
LHX9Q9NQ69 MT-TC-201ENST00000387405 66 ntBASIC2.61□□□□□ -1.99
LHX9Q9NQ69 AL445529.1-201ENST00000398713 389 ntBASIC2.61□□□□□ -1.99
LHX9Q9NQ69 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.61□□□□□ -1.99
LHX9Q9NQ69 AL513175.2-201ENST00000422071 443 ntBASIC2.61□□□□□ -1.99
LHX9Q9NQ69 TEX41-204ENST00000423031 491 ntTSL 4 BASIC2.61□□□□□ -1.99
LHX9Q9NQ69 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC2.61□□□□□ -1.99
LHX9Q9NQ69 AP000936.2-201ENST00000447151 681 ntBASIC2.61□□□□□ -1.99
LHX9Q9NQ69 MTCO1P48-201ENST00000448024 1096 ntBASIC2.61□□□□□ -1.99
LHX9Q9NQ69 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC2.61□□□□□ -1.99
LHX9Q9NQ69 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC2.61□□□□□ -1.99
LHX9Q9NQ69 RFC5P1-201ENST00000454419 874 ntBASIC2.61□□□□□ -1.99
LHX9Q9NQ69 PNPLA4P1-201ENST00000458328 305 ntBASIC2.61□□□□□ -1.99
LHX9Q9NQ69 AC092757.1-201ENST00000467293 467 ntBASIC2.61□□□□□ -1.99
LHX9Q9NQ69 AC146507.1-201ENST00000468335 354 ntBASIC2.61□□□□□ -1.99
LHX9Q9NQ69 PABPC1P3-201ENST00000469174 459 ntBASIC2.61□□□□□ -1.99
LHX9Q9NQ69 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.61□□□□□ -1.99
LHX9Q9NQ69 MTCYBP16-201ENST00000509187 1129 ntBASIC2.61□□□□□ -1.99
LHX9Q9NQ69 AC114781.4-201ENST00000513707 639 ntBASIC2.61□□□□□ -1.99
LHX9Q9NQ69 AC017037.2-201ENST00000513850 890 ntBASIC2.61□□□□□ -1.99
LHX9Q9NQ69 SNORA9.3-201ENST00000516383 129 ntBASIC2.61□□□□□ -1.99
LHX9Q9NQ69 RNU6-1261P-201ENST00000517194 104 ntBASIC2.61□□□□□ -1.99
LHX9Q9NQ69 MTND2P32-201ENST00000521584 1038 ntBASIC2.61□□□□□ -1.99
LHX9Q9NQ69 AP001372.4-201ENST00000524889 472 ntBASIC2.61□□□□□ -1.99
LHX9Q9NQ69 AC239860.2-201ENST00000525886 270 ntBASIC2.61□□□□□ -1.99
LHX9Q9NQ69 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
LHX9Q9NQ69 SETP2-201ENST00000553886 926 ntBASIC2.61□□□□□ -1.99
LHX9Q9NQ69 AL132657.2-201ENST00000564417 358 ntBASIC2.61□□□□□ -1.99
LHX9Q9NQ69 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC2.61□□□□□ -1.99
LHX9Q9NQ69 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
LHX9Q9NQ69 AC113368.1-201ENST00000603736 382 ntBASIC2.61□□□□□ -1.99
LHX9Q9NQ69 AL450336.1-201ENST00000605180 586 ntBASIC2.61□□□□□ -1.99
LHX9Q9NQ69 AC026790.2-201ENST00000606282 430 ntBASIC2.61□□□□□ -1.99
LHX9Q9NQ69 AC008083.4-201ENST00000615076 444 ntBASIC2.61□□□□□ -1.99
LHX9Q9NQ69 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.61□□□□□ -1.99
LHX9Q9NQ69 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC2.61□□□□□ -1.99
LHX9Q9NQ69 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
LHX9Q9NQ69 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
LHX9Q9NQ69 AL161431.1-201ENST00000618966 4205 ntBASIC2.6□□□□□ -1.99
LHX9Q9NQ69 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.6□□□□□ -1.99
LHX9Q9NQ69 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
LHX9Q9NQ69 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.6□□□□□ -1.99
LHX9Q9NQ69 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
LHX9Q9NQ69 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
LHX9Q9NQ69 AC004925.1-201ENST00000624256 2706 ntBASIC2.6□□□□□ -1.99
LHX9Q9NQ69 ZNF734P-201ENST00000419494 1534 ntBASIC2.6□□□□□ -1.99
LHX9Q9NQ69 Y_RNA.25-201ENST00000362528 102 ntBASIC2.6□□□□□ -1.99
LHX9Q9NQ69 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
LHX9Q9NQ69 SNORA51.6-201ENST00000384151 125 ntBASIC2.6□□□□□ -1.99
LHX9Q9NQ69 SNRPEP2-201ENST00000397592 279 ntBASIC2.6□□□□□ -1.99
LHX9Q9NQ69 EIF5P1-201ENST00000400019 1231 ntBASIC2.6□□□□□ -1.99
LHX9Q9NQ69 ERHP2-201ENST00000402323 299 ntBASIC2.6□□□□□ -1.99
LHX9Q9NQ69 AL450338.1-201ENST00000407987 512 ntBASIC2.6□□□□□ -1.99
LHX9Q9NQ69 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.6□□□□□ -1.99
LHX9Q9NQ69 MTND2P5-201ENST00000432656 1006 ntBASIC2.6□□□□□ -1.99
LHX9Q9NQ69 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.6□□□□□ -1.99
LHX9Q9NQ69 VN1R10P-201ENST00000447106 875 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms