Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.61□□□□□ -1.67
VTA1Q9NP79 TRIM60P8Y-201ENST00000436338 762 ntBASIC4.61□□□□□ -1.67
VTA1Q9NP79 AC069285.2-201ENST00000440210 275 ntBASIC4.61□□□□□ -1.67
VTA1Q9NP79 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.61□□□□□ -1.67
VTA1Q9NP79 CALM1P1-201ENST00000442082 433 ntBASIC4.61□□□□□ -1.67
VTA1Q9NP79 MTND4P18-201ENST00000447010 465 ntBASIC4.61□□□□□ -1.67
VTA1Q9NP79 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.61□□□□□ -1.67
VTA1Q9NP79 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC4.61□□□□□ -1.67
VTA1Q9NP79 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC4.61□□□□□ -1.67
VTA1Q9NP79 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC4.61□□□□□ -1.67
VTA1Q9NP79 RPL5P30-201ENST00000465511 891 ntBASIC4.61□□□□□ -1.67
VTA1Q9NP79 RPL29P14-201ENST00000495837 428 ntBASIC4.61□□□□□ -1.67
VTA1Q9NP79 AC135721.1-201ENST00000497954 479 ntBASIC4.61□□□□□ -1.67
VTA1Q9NP79 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC4.61□□□□□ -1.67
VTA1Q9NP79 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.61□□□□□ -1.67
VTA1Q9NP79 AC105914.1-201ENST00000511798 226 ntBASIC4.61□□□□□ -1.67
VTA1Q9NP79 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.61□□□□□ -1.67
VTA1Q9NP79 MYL12AP1-201ENST00000518490 515 ntBASIC4.61□□□□□ -1.67
VTA1Q9NP79 DEFB108D-201ENST00000527787 222 ntBASIC4.61□□□□□ -1.67
VTA1Q9NP79 AC118273.2-201ENST00000532092 465 ntBASIC4.61□□□□□ -1.67
VTA1Q9NP79 AL133271.1-201ENST00000538229 291 ntBASIC4.61□□□□□ -1.67
VTA1Q9NP79 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.61□□□□□ -1.67
VTA1Q9NP79 AC128657.1-201ENST00000549459 145 ntBASIC4.61□□□□□ -1.67
VTA1Q9NP79 HMGB1P6-201ENST00000569046 646 ntBASIC4.61□□□□□ -1.67
VTA1Q9NP79 AC015813.4-201ENST00000610469 179 ntBASIC4.61□□□□□ -1.67
VTA1Q9NP79 MIR6868-201ENST00000611215 58 ntBASIC4.61□□□□□ -1.67
VTA1Q9NP79 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
VTA1Q9NP79 AC002553.4-201ENST00000616896 331 ntBASIC4.61□□□□□ -1.67
VTA1Q9NP79 AC006338.1-201ENST00000618453 749 ntBASIC4.61□□□□□ -1.67
VTA1Q9NP79 AC039056.2-201ENST00000622261 511 ntBASIC4.61□□□□□ -1.67
VTA1Q9NP79 AL354798.1-201ENST00000622505 329 ntBASIC4.61□□□□□ -1.67
VTA1Q9NP79 AC019226.1-201ENST00000625666 515 ntBASIC4.61□□□□□ -1.67
VTA1Q9NP79 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
VTA1Q9NP79 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
VTA1Q9NP79 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC4.61□□□□□ -1.67
VTA1Q9NP79 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
VTA1Q9NP79 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
VTA1Q9NP79 AC074029.4-201ENST00000624796 1859 ntBASIC4.6□□□□□ -1.67
VTA1Q9NP79 RNU6-213P-201ENST00000384051 104 ntBASIC4.6□□□□□ -1.67
VTA1Q9NP79 HMGB3P20-201ENST00000417997 600 ntBASIC4.6□□□□□ -1.67
VTA1Q9NP79 EIF4EP1-201ENST00000422311 642 ntBASIC4.6□□□□□ -1.67
VTA1Q9NP79 AL451062.2-201ENST00000427515 271 ntBASIC4.6□□□□□ -1.67
VTA1Q9NP79 AC018644.1-201ENST00000429934 551 ntBASIC4.6□□□□□ -1.67
VTA1Q9NP79 AL445584.1-201ENST00000431451 330 ntBASIC4.6□□□□□ -1.67
VTA1Q9NP79 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC4.6□□□□□ -1.67
VTA1Q9NP79 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.6□□□□□ -1.67
VTA1Q9NP79 MTATP6P23-201ENST00000440153 476 ntBASIC4.6□□□□□ -1.67
VTA1Q9NP79 AL133547.1-201ENST00000448546 220 ntBASIC4.6□□□□□ -1.67
VTA1Q9NP79 AC133473.1-201ENST00000455173 299 ntBASIC4.6□□□□□ -1.67
VTA1Q9NP79 AC027673.1-201ENST00000456245 405 ntBASIC4.6□□□□□ -1.67
VTA1Q9NP79 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC4.6□□□□□ -1.67
VTA1Q9NP79 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC4.6□□□□□ -1.67
VTA1Q9NP79 RPS27AP1-201ENST00000475545 471 ntBASIC4.6□□□□□ -1.67
VTA1Q9NP79 RPL36AP51-201ENST00000487216 318 ntBASIC4.6□□□□□ -1.67
VTA1Q9NP79 AC068305.1-201ENST00000497406 726 ntBASIC4.6□□□□□ -1.67
VTA1Q9NP79 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
VTA1Q9NP79 AC116353.2-201ENST00000505332 712 ntBASIC4.6□□□□□ -1.67
VTA1Q9NP79 VWA8P1-201ENST00000510889 176 ntBASIC4.6□□□□□ -1.67
VTA1Q9NP79 AC026801.2-201ENST00000515352 425 ntBASIC4.6□□□□□ -1.67
VTA1Q9NP79 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC4.6□□□□□ -1.67
VTA1Q9NP79 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.6□□□□□ -1.67
VTA1Q9NP79 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC4.6□□□□□ -1.67
VTA1Q9NP79 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC4.6□□□□□ -1.67
VTA1Q9NP79 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.6□□□□□ -1.67
VTA1Q9NP79 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.6□□□□□ -1.67
VTA1Q9NP79 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
VTA1Q9NP79 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
VTA1Q9NP79 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
VTA1Q9NP79 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
VTA1Q9NP79 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
VTA1Q9NP79 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
VTA1Q9NP79 CR848007.1-201ENST00000442354 1699 ntBASIC4.6□□□□□ -1.67
VTA1Q9NP79 AL645937.1-201ENST00000641739 1652 ntBASIC4.6□□□□□ -1.67
VTA1Q9NP79 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.6□□□□□ -1.67
VTA1Q9NP79 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.6□□□□□ -1.67
VTA1Q9NP79 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
VTA1Q9NP79 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
VTA1Q9NP79 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.6□□□□□ -1.67
VTA1Q9NP79 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
VTA1Q9NP79 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
VTA1Q9NP79 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.59□□□□□ -1.67
VTA1Q9NP79 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
VTA1Q9NP79 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
VTA1Q9NP79 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
VTA1Q9NP79 Y_RNA.159-201ENST00000363674 87 ntBASIC4.59□□□□□ -1.67
VTA1Q9NP79 Y_RNA.256-201ENST00000364594 104 ntBASIC4.59□□□□□ -1.67
VTA1Q9NP79 MIR195-201ENST00000385194 87 ntBASIC4.59□□□□□ -1.67
VTA1Q9NP79 RPS4XP8-201ENST00000402039 771 ntBASIC4.59□□□□□ -1.67
VTA1Q9NP79 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.59□□□□□ -1.67
VTA1Q9NP79 USP9YP27-201ENST00000418455 438 ntBASIC4.59□□□□□ -1.67
VTA1Q9NP79 AC244098.2-201ENST00000422068 99 ntBASIC4.59□□□□□ -1.67
VTA1Q9NP79 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.59□□□□□ -1.67
VTA1Q9NP79 OR4K11P-201ENST00000431829 904 ntBASIC4.59□□□□□ -1.67
VTA1Q9NP79 RPL36AP6-201ENST00000435770 321 ntBASIC4.59□□□□□ -1.67
VTA1Q9NP79 HMGB3P12-201ENST00000438745 556 ntBASIC4.59□□□□□ -1.67
VTA1Q9NP79 AL353572.1-201ENST00000442490 417 ntBASIC4.59□□□□□ -1.67
VTA1Q9NP79 DDX3P2-201ENST00000446138 111 ntBASIC4.59□□□□□ -1.67
VTA1Q9NP79 SNORD97-201ENST00000459187 142 ntBASIC4.59□□□□□ -1.67
VTA1Q9NP79 RPL23AP2-201ENST00000471227 466 ntBASIC4.59□□□□□ -1.67
VTA1Q9NP79 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms