Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
PCDH9Q9HC56 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.63□□□□□ -1.83
PCDH9Q9HC56 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.63□□□□□ -1.83
PCDH9Q9HC56 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PCDH9Q9HC56 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PCDH9Q9HC56 MIR30E-201ENST00000362104 92 ntBASIC3.63□□□□□ -1.83
PCDH9Q9HC56 SNORD9-201ENST00000362566 104 ntBASIC3.63□□□□□ -1.83
PCDH9Q9HC56 AL359837.1-201ENST00000381357 287 ntBASIC3.63□□□□□ -1.83
PCDH9Q9HC56 SNORA5A-201ENST00000384111 134 ntBASIC3.63□□□□□ -1.83
PCDH9Q9HC56 RNU6-339P-201ENST00000384310 107 ntBASIC3.63□□□□□ -1.83
PCDH9Q9HC56 RNU6-348P-201ENST00000384386 107 ntBASIC3.63□□□□□ -1.83
PCDH9Q9HC56 RNU6-192P-201ENST00000391253 100 ntBASIC3.63□□□□□ -1.83
PCDH9Q9HC56 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.63□□□□□ -1.83
PCDH9Q9HC56 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.63□□□□□ -1.83
PCDH9Q9HC56 USP9YP13-201ENST00000417797 480 ntBASIC3.63□□□□□ -1.83
PCDH9Q9HC56 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.63□□□□□ -1.83
PCDH9Q9HC56 RPL23AP33-201ENST00000442301 452 ntBASIC3.63□□□□□ -1.83
PCDH9Q9HC56 AL022238.1-201ENST00000442557 355 ntBASIC3.63□□□□□ -1.83
PCDH9Q9HC56 FAM103A2P-201ENST00000444122 354 ntBASIC3.63□□□□□ -1.83
PCDH9Q9HC56 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.63□□□□□ -1.83
PCDH9Q9HC56 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.63□□□□□ -1.83
PCDH9Q9HC56 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.63□□□□□ -1.83
PCDH9Q9HC56 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
PCDH9Q9HC56 TPT1P7-201ENST00000458300 517 ntBASIC3.63□□□□□ -1.83
PCDH9Q9HC56 AC010401.1-201ENST00000463867 348 ntBASIC3.63□□□□□ -1.83
PCDH9Q9HC56 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PCDH9Q9HC56 RPL7L1P8-201ENST00000469911 741 ntBASIC3.63□□□□□ -1.83
PCDH9Q9HC56 AC021205.2-201ENST00000480069 347 ntBASIC3.63□□□□□ -1.83
PCDH9Q9HC56 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.63□□□□□ -1.83
PCDH9Q9HC56 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.63□□□□□ -1.83
PCDH9Q9HC56 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.63□□□□□ -1.83
PCDH9Q9HC56 OR5H5P-201ENST00000503164 928 ntBASIC3.63□□□□□ -1.83
PCDH9Q9HC56 AC110768.1-201ENST00000509222 400 ntBASIC3.63□□□□□ -1.83
PCDH9Q9HC56 NDUFB4P2-201ENST00000509515 391 ntBASIC3.63□□□□□ -1.83
PCDH9Q9HC56 SAP18P1-201ENST00000512058 390 ntBASIC3.63□□□□□ -1.83
PCDH9Q9HC56 RNU4-60P-201ENST00000517239 135 ntBASIC3.63□□□□□ -1.83
PCDH9Q9HC56 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.63□□□□□ -1.83
PCDH9Q9HC56 AC137800.2-201ENST00000574375 120 ntBASIC3.63□□□□□ -1.83
PCDH9Q9HC56 AC090615.1-201ENST00000577519 154 ntBASIC3.63□□□□□ -1.83
PCDH9Q9HC56 AC010928.3-201ENST00000587712 541 ntBASIC3.63□□□□□ -1.83
PCDH9Q9HC56 DEFB131E-202ENST00000602581 683 ntBASIC3.63□□□□□ -1.83
PCDH9Q9HC56 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.63□□□□□ -1.83
PCDH9Q9HC56 AC073648.5-201ENST00000603502 305 ntBASIC3.63□□□□□ -1.83
PCDH9Q9HC56 AC098614.4-201ENST00000607601 462 ntBASIC3.63□□□□□ -1.83
PCDH9Q9HC56 AC006329.2-201ENST00000611491 394 ntBASIC3.63□□□□□ -1.83
PCDH9Q9HC56 AC110801.1-201ENST00000623590 212 ntBASIC3.63□□□□□ -1.83
PCDH9Q9HC56 AC091925.2-201ENST00000625059 256 ntBASIC3.63□□□□□ -1.83
PCDH9Q9HC56 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.63□□□□□ -1.83
PCDH9Q9HC56 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PCDH9Q9HC56 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PCDH9Q9HC56 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
PCDH9Q9HC56 PABPC1P7-201ENST00000413177 1513 ntBASIC3.63□□□□□ -1.83
PCDH9Q9HC56 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PCDH9Q9HC56 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.63□□□□□ -1.83
PCDH9Q9HC56 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PCDH9Q9HC56 AL157700.1-201ENST00000561973 1432 ntBASIC3.62□□□□□ -1.83
PCDH9Q9HC56 CCT4P2-201ENST00000233836 1548 ntBASIC3.62□□□□□ -1.83
PCDH9Q9HC56 RNU6-989P-201ENST00000362756 107 ntBASIC3.62□□□□□ -1.83
PCDH9Q9HC56 RNU6-761P-201ENST00000384148 107 ntBASIC3.62□□□□□ -1.83
PCDH9Q9HC56 RNU6-1207P-201ENST00000384343 107 ntBASIC3.62□□□□□ -1.83
PCDH9Q9HC56 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
PCDH9Q9HC56 U3.29-201ENST00000391296 212 ntBASIC3.62□□□□□ -1.83
PCDH9Q9HC56 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.62□□□□□ -1.83
PCDH9Q9HC56 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.62□□□□□ -1.83
PCDH9Q9HC56 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC3.62□□□□□ -1.83
PCDH9Q9HC56 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.62□□□□□ -1.83
PCDH9Q9HC56 AP000907.1-201ENST00000428428 510 ntBASIC3.62□□□□□ -1.83
PCDH9Q9HC56 ARF4P2-201ENST00000430209 526 ntBASIC3.62□□□□□ -1.83
PCDH9Q9HC56 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.62□□□□□ -1.83
PCDH9Q9HC56 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC3.62□□□□□ -1.83
PCDH9Q9HC56 NPM1P49-201ENST00000448027 714 ntBASIC3.62□□□□□ -1.83
PCDH9Q9HC56 AL033528.1-201ENST00000453780 140 ntBASIC3.62□□□□□ -1.83
PCDH9Q9HC56 AC006539.3-201ENST00000454258 129 ntBASIC3.62□□□□□ -1.83
PCDH9Q9HC56 RPS4XP2-201ENST00000458402 793 ntBASIC3.62□□□□□ -1.83
PCDH9Q9HC56 SNORD105B-201ENST00000458770 79 ntBASIC3.62□□□□□ -1.83
PCDH9Q9HC56 snoU13.8-201ENST00000458890 104 ntBASIC3.62□□□□□ -1.83
PCDH9Q9HC56 AC034222.1-201ENST00000494052 532 ntBASIC3.62□□□□□ -1.83
PCDH9Q9HC56 TXNP6-201ENST00000510190 310 ntBASIC3.62□□□□□ -1.83
PCDH9Q9HC56 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
PCDH9Q9HC56 SNORA70.19-201ENST00000516717 90 ntBASIC3.62□□□□□ -1.83
PCDH9Q9HC56 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
PCDH9Q9HC56 AC245505.1-201ENST00000556398 224 ntBASIC3.62□□□□□ -1.83
PCDH9Q9HC56 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.62□□□□□ -1.83
PCDH9Q9HC56 AC034268.2-201ENST00000571784 482 ntBASIC3.62□□□□□ -1.83
PCDH9Q9HC56 MIR4528-201ENST00000577763 90 ntBASIC3.62□□□□□ -1.83
PCDH9Q9HC56 MIR5047-201ENST00000579212 100 ntBASIC3.62□□□□□ -1.83
PCDH9Q9HC56 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.62□□□□□ -1.83
PCDH9Q9HC56 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.62□□□□□ -1.83
PCDH9Q9HC56 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.62□□□□□ -1.83
PCDH9Q9HC56 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.62□□□□□ -1.83
PCDH9Q9HC56 AC091805.2-201ENST00000603848 235 ntBASIC3.62□□□□□ -1.83
PCDH9Q9HC56 AC010591.1-201ENST00000603941 649 ntBASIC3.62□□□□□ -1.83
PCDH9Q9HC56 AC112191.3-201ENST00000604371 277 ntBASIC3.62□□□□□ -1.83
PCDH9Q9HC56 MIR8058-201ENST00000615737 89 ntBASIC3.62□□□□□ -1.83
PCDH9Q9HC56 AC015540.1-201ENST00000615828 501 ntBASIC3.62□□□□□ -1.83
PCDH9Q9HC56 AC104010.1-201ENST00000616889 150 ntBASIC3.62□□□□□ -1.83
PCDH9Q9HC56 XIST_intron.1-201ENST00000619444 68 ntBASIC3.62□□□□□ -1.83
PCDH9Q9HC56 AC034229.5-201ENST00000624258 185 ntBASIC3.62□□□□□ -1.83
PCDH9Q9HC56 AL603839.4-201ENST00000624658 1005 ntBASIC3.62□□□□□ -1.83
PCDH9Q9HC56 AC112200.1-201ENST00000625015 234 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms