Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 MTND5P3-201ENST00000438536 1800 ntBASIC4.05□□□□□ -1.76
USP29Q9HBJ7 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.05□□□□□ -1.76
USP29Q9HBJ7 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
USP29Q9HBJ7 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
USP29Q9HBJ7 RNU6-97P-201ENST00000363387 104 ntBASIC4.05□□□□□ -1.76
USP29Q9HBJ7 SNORD51-201ENST00000384320 80 ntBASIC4.05□□□□□ -1.76
USP29Q9HBJ7 MIR124-3-201ENST00000384866 87 ntBASIC4.05□□□□□ -1.76
USP29Q9HBJ7 CIR1P3-201ENST00000405137 479 ntBASIC4.05□□□□□ -1.76
USP29Q9HBJ7 MIR1183-201ENST00000408856 89 ntBASIC4.05□□□□□ -1.76
USP29Q9HBJ7 Y_RNA.604-201ENST00000410574 102 ntBASIC4.05□□□□□ -1.76
USP29Q9HBJ7 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.05□□□□□ -1.76
USP29Q9HBJ7 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC4.05□□□□□ -1.76
USP29Q9HBJ7 AC069157.1-201ENST00000421749 137 ntBASIC4.05□□□□□ -1.76
USP29Q9HBJ7 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.05□□□□□ -1.76
USP29Q9HBJ7 AC005517.2-201ENST00000424673 553 ntBASIC4.05□□□□□ -1.76
USP29Q9HBJ7 RPL31P35-201ENST00000431058 377 ntBASIC4.05□□□□□ -1.76
USP29Q9HBJ7 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.05□□□□□ -1.76
USP29Q9HBJ7 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC4.05□□□□□ -1.76
USP29Q9HBJ7 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC4.05□□□□□ -1.76
USP29Q9HBJ7 Z99127.3-201ENST00000448158 395 ntBASIC4.05□□□□□ -1.76
USP29Q9HBJ7 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.05□□□□□ -1.76
USP29Q9HBJ7 C1DP4-201ENST00000455429 424 ntBASIC4.05□□□□□ -1.76
USP29Q9HBJ7 SNORD121B-201ENST00000458838 81 ntBASIC4.05□□□□□ -1.76
USP29Q9HBJ7 RPS3AP14-201ENST00000483907 780 ntBASIC4.05□□□□□ -1.76
USP29Q9HBJ7 AC055855.1-201ENST00000489563 579 ntBASIC4.05□□□□□ -1.76
USP29Q9HBJ7 AC110792.1-201ENST00000491826 472 ntBASIC4.05□□□□□ -1.76
USP29Q9HBJ7 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC4.05□□□□□ -1.76
USP29Q9HBJ7 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.05□□□□□ -1.76
USP29Q9HBJ7 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.05□□□□□ -1.76
USP29Q9HBJ7 FAM92A1P1-201ENST00000528023 890 ntBASIC4.05□□□□□ -1.76
USP29Q9HBJ7 RN7SL703P-201ENST00000578485 302 ntBASIC4.05□□□□□ -1.76
USP29Q9HBJ7 AC005255.1-201ENST00000593748 216 ntBASIC4.05□□□□□ -1.76
USP29Q9HBJ7 AC008739.3-201ENST00000603262 127 ntBASIC4.05□□□□□ -1.76
USP29Q9HBJ7 AC110741.2-201ENST00000605278 268 ntBASIC4.05□□□□□ -1.76
USP29Q9HBJ7 AC011816.2-201ENST00000607089 556 ntBASIC4.05□□□□□ -1.76
USP29Q9HBJ7 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.05□□□□□ -1.76
USP29Q9HBJ7 AL355073.2-201ENST00000612106 557 ntBASIC4.05□□□□□ -1.76
USP29Q9HBJ7 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
USP29Q9HBJ7 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.05□□□□□ -1.76
USP29Q9HBJ7 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.05□□□□□ -1.76
USP29Q9HBJ7 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.05□□□□□ -1.76
USP29Q9HBJ7 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
USP29Q9HBJ7 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
USP29Q9HBJ7 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.05□□□□□ -1.76
USP29Q9HBJ7 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
USP29Q9HBJ7 AC024560.2-201ENST00000507981 1497 ntBASIC4.05□□□□□ -1.76
USP29Q9HBJ7 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
USP29Q9HBJ7 AC009902.3-201ENST00000606235 2172 ntBASIC4.04□□□□□ -1.76
USP29Q9HBJ7 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
USP29Q9HBJ7 AC106871.1-201ENST00000568324 3102 ntBASIC4.04□□□□□ -1.76
USP29Q9HBJ7 LINC02471-203ENST00000641941 4752 ntBASIC4.04□□□□□ -1.76
USP29Q9HBJ7 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
USP29Q9HBJ7 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.04□□□□□ -1.76
USP29Q9HBJ7 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
USP29Q9HBJ7 RNU5E-1-201ENST00000362477 120 ntBASIC4.04□□□□□ -1.76
USP29Q9HBJ7 Y_RNA.256-201ENST00000364594 104 ntBASIC4.04□□□□□ -1.76
USP29Q9HBJ7 RNU6-761P-201ENST00000384148 107 ntBASIC4.04□□□□□ -1.76
USP29Q9HBJ7 MIR200C-201ENST00000384980 68 ntBASIC4.04□□□□□ -1.76
USP29Q9HBJ7 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
USP29Q9HBJ7 U3.20-201ENST00000390909 217 ntBASIC4.04□□□□□ -1.76
USP29Q9HBJ7 RPL7AP73-201ENST00000413490 353 ntBASIC4.04□□□□□ -1.76
USP29Q9HBJ7 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.04□□□□□ -1.76
USP29Q9HBJ7 MTND1P2-201ENST00000430604 821 ntBASIC4.04□□□□□ -1.76
USP29Q9HBJ7 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC4.04□□□□□ -1.76
USP29Q9HBJ7 MTCO2P11-201ENST00000431069 680 ntBASIC4.04□□□□□ -1.76
USP29Q9HBJ7 ARPC3P1-201ENST00000437218 533 ntBASIC4.04□□□□□ -1.76
USP29Q9HBJ7 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.04□□□□□ -1.76
USP29Q9HBJ7 RPS17P13-201ENST00000448974 407 ntBASIC4.04□□□□□ -1.76
USP29Q9HBJ7 AC132479.1-201ENST00000449160 144 ntBASIC4.04□□□□□ -1.76
USP29Q9HBJ7 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.04□□□□□ -1.76
USP29Q9HBJ7 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC4.04□□□□□ -1.76
USP29Q9HBJ7 HMGB1P25-201ENST00000468402 607 ntBASIC4.04□□□□□ -1.76
USP29Q9HBJ7 AC034236.1-201ENST00000469891 373 ntBASIC4.04□□□□□ -1.76
USP29Q9HBJ7 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
USP29Q9HBJ7 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC4.04□□□□□ -1.76
USP29Q9HBJ7 ARL4AP2-201ENST00000507378 601 ntBASIC4.04□□□□□ -1.76
USP29Q9HBJ7 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC4.04□□□□□ -1.76
USP29Q9HBJ7 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.04□□□□□ -1.76
USP29Q9HBJ7 AC087369.1-201ENST00000520775 996 ntBASIC4.04□□□□□ -1.76
USP29Q9HBJ7 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.04□□□□□ -1.76
USP29Q9HBJ7 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.04□□□□□ -1.76
USP29Q9HBJ7 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC4.04□□□□□ -1.76
USP29Q9HBJ7 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.04□□□□□ -1.76
USP29Q9HBJ7 AC006065.5-201ENST00000623427 349 ntBASIC4.04□□□□□ -1.76
USP29Q9HBJ7 AC040168.1-201ENST00000623594 991 ntBASIC4.04□□□□□ -1.76
USP29Q9HBJ7 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.04□□□□□ -1.76
USP29Q9HBJ7 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
USP29Q9HBJ7 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.04□□□□□ -1.76
USP29Q9HBJ7 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.04□□□□□ -1.76
USP29Q9HBJ7 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.04□□□□□ -1.76
USP29Q9HBJ7 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
USP29Q9HBJ7 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
USP29Q9HBJ7 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
USP29Q9HBJ7 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
USP29Q9HBJ7 AC011460.1-201ENST00000636268 1834 ntBASIC4.03□□□□□ -1.76
USP29Q9HBJ7 SNORD115-47-201ENST00000391226 86 ntBASIC4.03□□□□□ -1.76
USP29Q9HBJ7 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.03□□□□□ -1.76
USP29Q9HBJ7 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
USP29Q9HBJ7 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
USP29Q9HBJ7 RNA5SP56-201ENST00000410277 118 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms