Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 MIR3944-201ENST00000581277 108 ntBASIC3.2□□□□□ -1.9
UBQLN3Q9H347 MIR544B-201ENST00000582372 78 ntBASIC3.2□□□□□ -1.9
UBQLN3Q9H347 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.2□□□□□ -1.9
UBQLN3Q9H347 AC008751.2-201ENST00000597885 980 ntBASIC3.2□□□□□ -1.9
UBQLN3Q9H347 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.2□□□□□ -1.9
UBQLN3Q9H347 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.2□□□□□ -1.9
UBQLN3Q9H347 MIR7975-201ENST00000619350 68 ntBASIC3.2□□□□□ -1.9
UBQLN3Q9H347 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
UBQLN3Q9H347 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
UBQLN3Q9H347 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
UBQLN3Q9H347 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.2□□□□□ -1.9
UBQLN3Q9H347 AC118273.1-201ENST00000525324 3006 ntBASIC3.19□□□□□ -1.9
UBQLN3Q9H347 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.19□□□□□ -1.9
UBQLN3Q9H347 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.19□□□□□ -1.9
UBQLN3Q9H347 AC009812.4-201ENST00000569134 1805 ntBASIC3.19□□□□□ -1.9
UBQLN3Q9H347 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
UBQLN3Q9H347 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.19□□□□□ -1.9
UBQLN3Q9H347 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
UBQLN3Q9H347 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.19□□□□□ -1.9
UBQLN3Q9H347 MIR490-201ENST00000384865 128 ntBASIC3.19□□□□□ -1.9
UBQLN3Q9H347 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
UBQLN3Q9H347 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.19□□□□□ -1.9
UBQLN3Q9H347 MIR1305-201ENST00000408300 86 ntBASIC3.19□□□□□ -1.9
UBQLN3Q9H347 U3.42-201ENST00000408746 214 ntBASIC3.19□□□□□ -1.9
UBQLN3Q9H347 RN7SKP111-201ENST00000410349 271 ntBASIC3.19□□□□□ -1.9
UBQLN3Q9H347 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
UBQLN3Q9H347 TEX41-202ENST00000414256 604 ntTSL 5 BASIC3.19□□□□□ -1.9
UBQLN3Q9H347 AC017079.2-201ENST00000416102 485 ntBASIC3.19□□□□□ -1.9
UBQLN3Q9H347 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.19□□□□□ -1.9
UBQLN3Q9H347 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.19□□□□□ -1.9
UBQLN3Q9H347 RSU1P2-202ENST00000437884 485 ntBASIC3.19□□□□□ -1.9
UBQLN3Q9H347 AC108734.1-201ENST00000439549 399 ntBASIC3.19□□□□□ -1.9
UBQLN3Q9H347 AL592447.1-201ENST00000447592 540 ntBASIC3.19□□□□□ -1.9
UBQLN3Q9H347 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.19□□□□□ -1.9
UBQLN3Q9H347 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.19□□□□□ -1.9
UBQLN3Q9H347 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.19□□□□□ -1.9
UBQLN3Q9H347 PHBP14-201ENST00000512887 367 ntBASIC3.19□□□□□ -1.9
UBQLN3Q9H347 AC022483.1-201ENST00000514020 567 ntBASIC3.19□□□□□ -1.9
UBQLN3Q9H347 SNORA70.19-201ENST00000516717 90 ntBASIC3.19□□□□□ -1.9
UBQLN3Q9H347 FAM60DP-201ENST00000524174 632 ntBASIC3.19□□□□□ -1.9
UBQLN3Q9H347 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.19□□□□□ -1.9
UBQLN3Q9H347 DUXAP5-201ENST00000529668 529 ntBASIC3.19□□□□□ -1.9
UBQLN3Q9H347 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.19□□□□□ -1.9
UBQLN3Q9H347 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.19□□□□□ -1.9
UBQLN3Q9H347 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.19□□□□□ -1.9
UBQLN3Q9H347 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.19□□□□□ -1.9
UBQLN3Q9H347 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.19□□□□□ -1.9
UBQLN3Q9H347 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
UBQLN3Q9H347 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.19□□□□□ -1.9
UBQLN3Q9H347 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.19□□□□□ -1.9
UBQLN3Q9H347 AC055876.1-202ENST00000567053 138 ntBASIC3.19□□□□□ -1.9
UBQLN3Q9H347 AC145350.1-201ENST00000567426 208 ntBASIC3.19□□□□□ -1.9
UBQLN3Q9H347 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.19□□□□□ -1.9
UBQLN3Q9H347 AC018638.7-201ENST00000605836 1114 ntBASIC3.19□□□□□ -1.9
UBQLN3Q9H347 AC009570.1-201ENST00000609599 745 ntBASIC3.19□□□□□ -1.9
UBQLN3Q9H347 AC084757.4-201ENST00000616350 526 ntBASIC3.19□□□□□ -1.9
UBQLN3Q9H347 U4.6-201ENST00000621618 127 ntBASIC3.19□□□□□ -1.9
UBQLN3Q9H347 AP000676.3-201ENST00000623299 569 ntBASIC3.19□□□□□ -1.9
UBQLN3Q9H347 AC120349.3-201ENST00000624377 529 ntBASIC3.19□□□□□ -1.9
UBQLN3Q9H347 AC092192.1-201ENST00000633154 1018 ntBASIC3.19□□□□□ -1.9
UBQLN3Q9H347 PCMTD1P7-201ENST00000634506 357 ntBASIC3.19□□□□□ -1.9
UBQLN3Q9H347 AC099063.3-201ENST00000642066 185 ntBASIC3.19□□□□□ -1.9
UBQLN3Q9H347 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
UBQLN3Q9H347 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
UBQLN3Q9H347 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
UBQLN3Q9H347 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
UBQLN3Q9H347 MFSD8-233ENST00000641482 4860 ntBASIC3.19□□□□□ -1.9
UBQLN3Q9H347 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
UBQLN3Q9H347 ZNF826P-207ENST00000622273 1910 ntBASIC3.19□□□□□ -1.9
UBQLN3Q9H347 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
UBQLN3Q9H347 MTCO1P12-201ENST00000414273 1543 ntBASIC3.19□□□□□ -1.9
UBQLN3Q9H347 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
UBQLN3Q9H347 AC005183.1-201ENST00000603687 1979 ntBASIC3.18□□□□□ -1.9
UBQLN3Q9H347 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.18□□□□□ -1.9
UBQLN3Q9H347 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
UBQLN3Q9H347 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
UBQLN3Q9H347 FRG1CP-201ENST00000358464 769 ntBASIC3.18□□□□□ -1.9
UBQLN3Q9H347 RNU4-35P-201ENST00000362588 141 ntBASIC3.18□□□□□ -1.9
UBQLN3Q9H347 U3.20-201ENST00000390909 217 ntBASIC3.18□□□□□ -1.9
UBQLN3Q9H347 AL354719.1-201ENST00000406535 843 ntBASIC3.18□□□□□ -1.9
UBQLN3Q9H347 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.18□□□□□ -1.9
UBQLN3Q9H347 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.18□□□□□ -1.9
UBQLN3Q9H347 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.18□□□□□ -1.9
UBQLN3Q9H347 RPL27AP8-201ENST00000424277 446 ntBASIC3.18□□□□□ -1.9
UBQLN3Q9H347 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.18□□□□□ -1.9
UBQLN3Q9H347 AL445669.1-201ENST00000426743 755 ntBASIC3.18□□□□□ -1.9
UBQLN3Q9H347 UBE2D3P1-201ENST00000436669 444 ntBASIC3.18□□□□□ -1.9
UBQLN3Q9H347 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.18□□□□□ -1.9
UBQLN3Q9H347 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.18□□□□□ -1.9
UBQLN3Q9H347 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.18□□□□□ -1.9
UBQLN3Q9H347 AC008155.2-201ENST00000464337 397 ntBASIC3.18□□□□□ -1.9
UBQLN3Q9H347 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
UBQLN3Q9H347 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC3.18□□□□□ -1.9
UBQLN3Q9H347 MRPS33P3-201ENST00000513456 322 ntBASIC3.18□□□□□ -1.9
UBQLN3Q9H347 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.18□□□□□ -1.9
UBQLN3Q9H347 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.18□□□□□ -1.9
UBQLN3Q9H347 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.18□□□□□ -1.9
UBQLN3Q9H347 MTATP6P15-201ENST00000527233 835 ntBASIC3.18□□□□□ -1.9
UBQLN3Q9H347 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.18□□□□□ -1.9
UBQLN3Q9H347 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms