Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CDT1Q9H211 RNU6-989P-201ENST00000362756 107 ntBASIC3.86□□□□□ -1.79
CDT1Q9H211 Y_RNA.248-201ENST00000364501 109 ntBASIC3.86□□□□□ -1.79
CDT1Q9H211 RNU1-89P-201ENST00000384592 164 ntBASIC3.86□□□□□ -1.79
CDT1Q9H211 MIR490-201ENST00000384865 128 ntBASIC3.86□□□□□ -1.79
CDT1Q9H211 U3.39-201ENST00000408569 239 ntBASIC3.86□□□□□ -1.79
CDT1Q9H211 RN7SKP53-201ENST00000411337 315 ntBASIC3.86□□□□□ -1.79
CDT1Q9H211 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.86□□□□□ -1.79
CDT1Q9H211 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.86□□□□□ -1.79
CDT1Q9H211 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.86□□□□□ -1.79
CDT1Q9H211 AL356583.2-201ENST00000426536 280 ntBASIC3.86□□□□□ -1.79
CDT1Q9H211 AC109583.1-201ENST00000432156 268 ntBASIC3.86□□□□□ -1.79
CDT1Q9H211 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.86□□□□□ -1.79
CDT1Q9H211 AL590399.6-201ENST00000446396 307 ntBASIC3.86□□□□□ -1.79
CDT1Q9H211 RPL7P52-201ENST00000449200 742 ntBASIC3.86□□□□□ -1.79
CDT1Q9H211 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.86□□□□□ -1.79
CDT1Q9H211 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.86□□□□□ -1.79
CDT1Q9H211 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.86□□□□□ -1.79
CDT1Q9H211 MTCO1P42-201ENST00000457379 726 ntBASIC3.86□□□□□ -1.79
CDT1Q9H211 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.86□□□□□ -1.79
CDT1Q9H211 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC3.86□□□□□ -1.79
CDT1Q9H211 RNU6-27P-201ENST00000516146 107 ntBASIC3.86□□□□□ -1.79
CDT1Q9H211 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.86□□□□□ -1.79
CDT1Q9H211 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.86□□□□□ -1.79
CDT1Q9H211 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.86□□□□□ -1.79
CDT1Q9H211 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.86□□□□□ -1.79
CDT1Q9H211 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.86□□□□□ -1.79
CDT1Q9H211 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC3.86□□□□□ -1.79
CDT1Q9H211 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.86□□□□□ -1.79
CDT1Q9H211 MIR3913-1-201ENST00000577744 102 ntBASIC3.86□□□□□ -1.79
CDT1Q9H211 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.86□□□□□ -1.79
CDT1Q9H211 AL353997.4-201ENST00000586196 166 ntBASIC3.86□□□□□ -1.79
CDT1Q9H211 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.86□□□□□ -1.79
CDT1Q9H211 AC069200.1-201ENST00000609511 323 ntBASIC3.86□□□□□ -1.79
CDT1Q9H211 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.86□□□□□ -1.79
CDT1Q9H211 AC006329.2-201ENST00000611491 394 ntBASIC3.86□□□□□ -1.79
CDT1Q9H211 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.86□□□□□ -1.79
CDT1Q9H211 AC012314.7-201ENST00000619693 93 ntBASIC3.86□□□□□ -1.79
CDT1Q9H211 AC244100.1-202ENST00000621554 382 ntBASIC3.86□□□□□ -1.79
CDT1Q9H211 AP003355.3-201ENST00000623465 114 ntBASIC3.86□□□□□ -1.79
CDT1Q9H211 AC091925.2-201ENST00000625059 256 ntBASIC3.86□□□□□ -1.79
CDT1Q9H211 U6.105-201ENST00000637379 88 ntBASIC3.86□□□□□ -1.79
CDT1Q9H211 AC138649.5-201ENST00000637456 137 ntBASIC3.86□□□□□ -1.79
CDT1Q9H211 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.86□□□□□ -1.79
CDT1Q9H211 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CDT1Q9H211 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
CDT1Q9H211 MTND5P26-201ENST00000426018 1752 ntBASIC3.86□□□□□ -1.79
CDT1Q9H211 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CDT1Q9H211 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
CDT1Q9H211 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.86□□□□□ -1.79
CDT1Q9H211 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.86□□□□□ -1.79
CDT1Q9H211 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.85□□□□□ -1.79
CDT1Q9H211 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.85□□□□□ -1.79
CDT1Q9H211 AL049780.3-201ENST00000624612 1583 ntBASIC3.85□□□□□ -1.79
CDT1Q9H211 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CDT1Q9H211 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
CDT1Q9H211 AL161781.1-201ENST00000354277 403 ntBASIC3.85□□□□□ -1.79
CDT1Q9H211 RNU6-263P-201ENST00000363811 107 ntBASIC3.85□□□□□ -1.79
CDT1Q9H211 RNU6-283P-201ENST00000364788 107 ntBASIC3.85□□□□□ -1.79
CDT1Q9H211 RN7SKP226-201ENST00000364912 300 ntBASIC3.85□□□□□ -1.79
CDT1Q9H211 Y_RNA.390-201ENST00000383932 102 ntBASIC3.85□□□□□ -1.79
CDT1Q9H211 RNU6-761P-201ENST00000384148 107 ntBASIC3.85□□□□□ -1.79
CDT1Q9H211 MIR7-3-201ENST00000384898 110 ntBASIC3.85□□□□□ -1.79
CDT1Q9H211 SNORA11.2-201ENST00000408318 127 ntBASIC3.85□□□□□ -1.79
CDT1Q9H211 RNU6-248P-201ENST00000410720 107 ntBASIC3.85□□□□□ -1.79
CDT1Q9H211 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.85□□□□□ -1.79
CDT1Q9H211 EIF1P1-201ENST00000421436 341 ntBASIC3.85□□□□□ -1.79
CDT1Q9H211 AL513174.1-201ENST00000423182 629 ntBASIC3.85□□□□□ -1.79
CDT1Q9H211 AL159987.2-201ENST00000432754 307 ntBASIC3.85□□□□□ -1.79
CDT1Q9H211 AC091862.1-201ENST00000438016 1100 ntBASIC3.85□□□□□ -1.79
CDT1Q9H211 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.85□□□□□ -1.79
CDT1Q9H211 RPS20P32-201ENST00000456044 356 ntBASIC3.85□□□□□ -1.79
CDT1Q9H211 U3.44-201ENST00000458938 192 ntBASIC3.85□□□□□ -1.79
CDT1Q9H211 RPS4XP10-201ENST00000465034 731 ntBASIC3.85□□□□□ -1.79
CDT1Q9H211 AC084357.1-201ENST00000473404 255 ntBASIC3.85□□□□□ -1.79
CDT1Q9H211 AP001025.2-201ENST00000490908 477 ntBASIC3.85□□□□□ -1.79
CDT1Q9H211 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.85□□□□□ -1.79
CDT1Q9H211 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.85□□□□□ -1.79
CDT1Q9H211 TMEM248P1-201ENST00000510579 951 ntBASIC3.85□□□□□ -1.79
CDT1Q9H211 RNU6-718P-201ENST00000516166 105 ntBASIC3.85□□□□□ -1.79
CDT1Q9H211 RNA5SP309-201ENST00000516670 106 ntBASIC3.85□□□□□ -1.79
CDT1Q9H211 RNU4-60P-201ENST00000517239 135 ntBASIC3.85□□□□□ -1.79
CDT1Q9H211 AC090281.1-201ENST00000523019 276 ntBASIC3.85□□□□□ -1.79
CDT1Q9H211 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.85□□□□□ -1.79
CDT1Q9H211 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.85□□□□□ -1.79
CDT1Q9H211 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.85□□□□□ -1.79
CDT1Q9H211 AC136619.2-201ENST00000563361 631 ntBASIC3.85□□□□□ -1.79
CDT1Q9H211 AC019176.2-201ENST00000611579 315 ntBASIC3.85□□□□□ -1.79
CDT1Q9H211 AC104010.1-201ENST00000616889 150 ntBASIC3.85□□□□□ -1.79
CDT1Q9H211 CRYM-AS1-204ENST00000637983 556 ntBASIC3.85□□□□□ -1.79
CDT1Q9H211 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CDT1Q9H211 MTND5P3-201ENST00000438536 1800 ntBASIC3.85□□□□□ -1.79
CDT1Q9H211 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CDT1Q9H211 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CDT1Q9H211 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.85□□□□□ -1.79
CDT1Q9H211 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
CDT1Q9H211 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.85□□□□□ -1.79
CDT1Q9H211 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CDT1Q9H211 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CDT1Q9H211 MTCO1P24-201ENST00000515438 1558 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms