Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 AC130324.3-201ENST00000614165 542 ntBASIC4.8□□□□□ -1.64
RNF38Q9H0F5 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC4.8□□□□□ -1.64
RNF38Q9H0F5 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.8□□□□□ -1.64
RNF38Q9H0F5 AL136164.3-201ENST00000624429 3978 ntBASIC4.8□□□□□ -1.64
RNF38Q9H0F5 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RNF38Q9H0F5 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
RNF38Q9H0F5 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RNF38Q9H0F5 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
RNF38Q9H0F5 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
RNF38Q9H0F5 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RNF38Q9H0F5 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RNF38Q9H0F5 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RNF38Q9H0F5 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
RNF38Q9H0F5 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RNF38Q9H0F5 Y_RNA.22-201ENST00000362492 102 ntBASIC4.79□□□□□ -1.64
RNF38Q9H0F5 Y_RNA.133-201ENST00000363428 110 ntBASIC4.79□□□□□ -1.64
RNF38Q9H0F5 SNORA62.1-201ENST00000364287 154 ntBASIC4.79□□□□□ -1.64
RNF38Q9H0F5 Y_RNA.301-201ENST00000364990 103 ntBASIC4.79□□□□□ -1.64
RNF38Q9H0F5 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
RNF38Q9H0F5 Z98745.1-201ENST00000402553 494 ntBASIC4.79□□□□□ -1.64
RNF38Q9H0F5 MIR548F5-201ENST00000408421 86 ntBASIC4.79□□□□□ -1.64
RNF38Q9H0F5 RPS12P23-201ENST00000419579 400 ntBASIC4.79□□□□□ -1.64
RNF38Q9H0F5 RPL36AP10-201ENST00000421785 322 ntBASIC4.79□□□□□ -1.64
RNF38Q9H0F5 CKS1BP6-201ENST00000424932 240 ntBASIC4.79□□□□□ -1.64
RNF38Q9H0F5 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.79□□□□□ -1.64
RNF38Q9H0F5 RPL7L1P10-201ENST00000427790 463 ntBASIC4.79□□□□□ -1.64
RNF38Q9H0F5 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.79□□□□□ -1.64
RNF38Q9H0F5 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.79□□□□□ -1.64
RNF38Q9H0F5 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC4.79□□□□□ -1.64
RNF38Q9H0F5 PRPS1P1-201ENST00000445305 876 ntBASIC4.79□□□□□ -1.64
RNF38Q9H0F5 RPL7P52-201ENST00000449200 742 ntBASIC4.79□□□□□ -1.64
RNF38Q9H0F5 MTND5P22-201ENST00000458380 195 ntBASIC4.79□□□□□ -1.64
RNF38Q9H0F5 snoU13.8-201ENST00000458890 104 ntBASIC4.79□□□□□ -1.64
RNF38Q9H0F5 AL049714.1-201ENST00000466686 347 ntBASIC4.79□□□□□ -1.64
RNF38Q9H0F5 ST13P14-201ENST00000474095 734 ntBASIC4.79□□□□□ -1.64
RNF38Q9H0F5 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC4.79□□□□□ -1.64
RNF38Q9H0F5 AC020893.1-201ENST00000502452 580 ntBASIC4.79□□□□□ -1.64
RNF38Q9H0F5 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC4.79□□□□□ -1.64
RNF38Q9H0F5 OR5BN1P-201ENST00000532955 829 ntBASIC4.79□□□□□ -1.64
RNF38Q9H0F5 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.79□□□□□ -1.64
RNF38Q9H0F5 AL163153.1-201ENST00000554223 283 ntBASIC4.79□□□□□ -1.64
RNF38Q9H0F5 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC4.79□□□□□ -1.64
RNF38Q9H0F5 HMGB3P26-201ENST00000560051 582 ntBASIC4.79□□□□□ -1.64
RNF38Q9H0F5 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.79□□□□□ -1.64
RNF38Q9H0F5 MIR3942-201ENST00000585264 109 ntBASIC4.79□□□□□ -1.64
RNF38Q9H0F5 HMGB2P1-201ENST00000591146 634 ntBASIC4.79□□□□□ -1.64
RNF38Q9H0F5 uc_338.12-201ENST00000616344 181 ntBASIC4.79□□□□□ -1.64
RNF38Q9H0F5 U73479.1-201ENST00000618062 168 ntBASIC4.79□□□□□ -1.64
RNF38Q9H0F5 AC091925.1-201ENST00000623204 462 ntBASIC4.79□□□□□ -1.64
RNF38Q9H0F5 AC244517.12-201ENST00000623581 663 ntBASIC4.79□□□□□ -1.64
RNF38Q9H0F5 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.79□□□□□ -1.64
RNF38Q9H0F5 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
RNF38Q9H0F5 AL359922.3-201ENST00000624779 1670 ntBASIC4.79□□□□□ -1.64
RNF38Q9H0F5 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
RNF38Q9H0F5 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
RNF38Q9H0F5 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
RNF38Q9H0F5 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RNF38Q9H0F5 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.78□□□□□ -1.64
RNF38Q9H0F5 AC108751.5-201ENST00000492880 1336 ntBASIC4.78□□□□□ -1.64
RNF38Q9H0F5 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RNF38Q9H0F5 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RNF38Q9H0F5 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.78□□□□□ -1.64
RNF38Q9H0F5 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RNF38Q9H0F5 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.78□□□□□ -1.64
RNF38Q9H0F5 RNU6-552P-201ENST00000362869 119 ntBASIC4.78□□□□□ -1.64
RNF38Q9H0F5 RNU6-522P-201ENST00000364497 107 ntBASIC4.78□□□□□ -1.64
RNF38Q9H0F5 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RNF38Q9H0F5 U3.29-201ENST00000391296 212 ntBASIC4.78□□□□□ -1.64
RNF38Q9H0F5 RNU6-370P-201ENST00000411008 104 ntBASIC4.78□□□□□ -1.64
RNF38Q9H0F5 BX323014.1-201ENST00000412876 237 ntBASIC4.78□□□□□ -1.64
RNF38Q9H0F5 FTH1P1-201ENST00000437933 532 ntBASIC4.78□□□□□ -1.64
RNF38Q9H0F5 RPL23AP93-201ENST00000440847 484 ntBASIC4.78□□□□□ -1.64
RNF38Q9H0F5 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.78□□□□□ -1.64
RNF38Q9H0F5 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.78□□□□□ -1.64
RNF38Q9H0F5 TPT1P12-201ENST00000448968 492 ntBASIC4.78□□□□□ -1.64
RNF38Q9H0F5 PPIAP3-201ENST00000450588 505 ntBASIC4.78□□□□□ -1.64
RNF38Q9H0F5 AC009963.2-201ENST00000453431 138 ntBASIC4.78□□□□□ -1.64
RNF38Q9H0F5 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC4.78□□□□□ -1.64
RNF38Q9H0F5 RN7SL385P-201ENST00000468873 276 ntBASIC4.78□□□□□ -1.64
RNF38Q9H0F5 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.78□□□□□ -1.64
RNF38Q9H0F5 MTCO1P29-201ENST00000496868 288 ntBASIC4.78□□□□□ -1.64
RNF38Q9H0F5 AC092436.1-201ENST00000506450 503 ntBASIC4.78□□□□□ -1.64
RNF38Q9H0F5 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.78□□□□□ -1.64
RNF38Q9H0F5 AC093303.1-201ENST00000514549 295 ntBASIC4.78□□□□□ -1.64
RNF38Q9H0F5 RN7SKP219-201ENST00000516825 296 ntBASIC4.78□□□□□ -1.64
RNF38Q9H0F5 AP001804.3-201ENST00000525146 880 ntBASIC4.78□□□□□ -1.64
RNF38Q9H0F5 AP003385.6-201ENST00000531603 374 ntBASIC4.78□□□□□ -1.64
RNF38Q9H0F5 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC4.78□□□□□ -1.64
RNF38Q9H0F5 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.78□□□□□ -1.64
RNF38Q9H0F5 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.78□□□□□ -1.64
RNF38Q9H0F5 XIAPP1-201ENST00000603162 600 ntBASIC4.78□□□□□ -1.64
RNF38Q9H0F5 AL031666.3-201ENST00000609320 1006 ntBASIC4.78□□□□□ -1.64
RNF38Q9H0F5 AC006329.2-201ENST00000611491 394 ntBASIC4.78□□□□□ -1.64
RNF38Q9H0F5 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.78□□□□□ -1.64
RNF38Q9H0F5 AL731566.2-201ENST00000618971 317 ntBASIC4.78□□□□□ -1.64
RNF38Q9H0F5 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RNF38Q9H0F5 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
RNF38Q9H0F5 AL391684.1-202ENST00000641293 1636 ntBASIC4.78□□□□□ -1.64
RNF38Q9H0F5 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
RNF38Q9H0F5 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms