Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.34□□□□□ -1.55
CNTNAP4Q9C0A0 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CNTNAP4Q9C0A0 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CNTNAP4Q9C0A0 AC004972.1-201ENST00000623934 2209 ntBASIC5.34□□□□□ -1.55
CNTNAP4Q9C0A0 AC008079.2-201ENST00000623543 20396 ntBASIC5.34□□□□□ -1.55
CNTNAP4Q9C0A0 AC016588.2-201ENST00000632484 3021 ntBASIC5.34□□□□□ -1.55
CNTNAP4Q9C0A0 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
CNTNAP4Q9C0A0 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CNTNAP4Q9C0A0 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CNTNAP4Q9C0A0 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
CNTNAP4Q9C0A0 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
CNTNAP4Q9C0A0 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.33□□□□□ -1.56
CNTNAP4Q9C0A0 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CNTNAP4Q9C0A0 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
CNTNAP4Q9C0A0 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
CNTNAP4Q9C0A0 RN7SKP44-201ENST00000363602 316 ntBASIC5.33□□□□□ -1.56
CNTNAP4Q9C0A0 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC5.33□□□□□ -1.56
CNTNAP4Q9C0A0 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
CNTNAP4Q9C0A0 Y_RNA.401-201ENST00000383965 117 ntBASIC5.33□□□□□ -1.56
CNTNAP4Q9C0A0 Y_RNA.530-201ENST00000384587 101 ntBASIC5.33□□□□□ -1.56
CNTNAP4Q9C0A0 MIR454-201ENST00000390180 115 ntBASIC5.33□□□□□ -1.56
CNTNAP4Q9C0A0 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CNTNAP4Q9C0A0 DSTNP4-201ENST00000399472 474 ntBASIC5.33□□□□□ -1.56
CNTNAP4Q9C0A0 AL603908.1-201ENST00000406098 201 ntBASIC5.33□□□□□ -1.56
CNTNAP4Q9C0A0 RNU2-47P-201ENST00000410649 186 ntBASIC5.33□□□□□ -1.56
CNTNAP4Q9C0A0 Y_RNA.615-201ENST00000410769 117 ntBASIC5.33□□□□□ -1.56
CNTNAP4Q9C0A0 RNU4-6P-201ENST00000410804 122 ntBASIC5.33□□□□□ -1.56
CNTNAP4Q9C0A0 CRYBB2P1-203ENST00000415709 538 ntBASIC5.33□□□□□ -1.56
CNTNAP4Q9C0A0 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC5.33□□□□□ -1.56
CNTNAP4Q9C0A0 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC5.33□□□□□ -1.56
CNTNAP4Q9C0A0 NOTCH2P1-201ENST00000443481 624 ntBASIC5.33□□□□□ -1.56
CNTNAP4Q9C0A0 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC5.33□□□□□ -1.56
CNTNAP4Q9C0A0 IGKV1OR-3-201ENST00000446944 348 ntBASIC5.33□□□□□ -1.56
CNTNAP4Q9C0A0 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CNTNAP4Q9C0A0 AC055855.1-201ENST00000489563 579 ntBASIC5.33□□□□□ -1.56
CNTNAP4Q9C0A0 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.33□□□□□ -1.56
CNTNAP4Q9C0A0 AC005741.1-201ENST00000511094 432 ntBASIC5.33□□□□□ -1.56
CNTNAP4Q9C0A0 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC5.33□□□□□ -1.56
CNTNAP4Q9C0A0 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC5.33□□□□□ -1.56
CNTNAP4Q9C0A0 AC011979.2-201ENST00000527568 352 ntBASIC5.33□□□□□ -1.56
CNTNAP4Q9C0A0 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC5.33□□□□□ -1.56
CNTNAP4Q9C0A0 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC5.33□□□□□ -1.56
CNTNAP4Q9C0A0 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC5.33□□□□□ -1.56
CNTNAP4Q9C0A0 AC018552.3-201ENST00000567416 561 ntBASIC5.33□□□□□ -1.56
CNTNAP4Q9C0A0 AC010653.1-201ENST00000571108 881 ntBASIC5.33□□□□□ -1.56
CNTNAP4Q9C0A0 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC5.33□□□□□ -1.56
CNTNAP4Q9C0A0 POLR3GP2-201ENST00000588366 668 ntBASIC5.33□□□□□ -1.56
CNTNAP4Q9C0A0 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CNTNAP4Q9C0A0 AL669831.4-202ENST00000590817 238 ntBASIC5.33□□□□□ -1.56
CNTNAP4Q9C0A0 AC069200.1-201ENST00000609511 323 ntBASIC5.33□□□□□ -1.56
CNTNAP4Q9C0A0 AL121772.2-201ENST00000614331 297 ntBASIC5.33□□□□□ -1.56
CNTNAP4Q9C0A0 uc_338.15-201ENST00000615470 191 ntBASIC5.33□□□□□ -1.56
CNTNAP4Q9C0A0 uc_338.11-201ENST00000619132 160 ntBASIC5.33□□□□□ -1.56
CNTNAP4Q9C0A0 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC5.33□□□□□ -1.56
CNTNAP4Q9C0A0 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.33□□□□□ -1.56
CNTNAP4Q9C0A0 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CNTNAP4Q9C0A0 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.33□□□□□ -1.56
CNTNAP4Q9C0A0 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CNTNAP4Q9C0A0 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CNTNAP4Q9C0A0 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
CNTNAP4Q9C0A0 MTCO1P12-201ENST00000414273 1543 ntBASIC5.33□□□□□ -1.56
CNTNAP4Q9C0A0 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CNTNAP4Q9C0A0 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
CNTNAP4Q9C0A0 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
CNTNAP4Q9C0A0 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CNTNAP4Q9C0A0 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.32□□□□□ -1.56
CNTNAP4Q9C0A0 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CNTNAP4Q9C0A0 AC116667.1-201ENST00000604855 2072 ntBASIC5.32□□□□□ -1.56
CNTNAP4Q9C0A0 Y_RNA.197-201ENST00000364004 102 ntBASIC5.32□□□□□ -1.56
CNTNAP4Q9C0A0 Y_RNA.301-201ENST00000364990 103 ntBASIC5.32□□□□□ -1.56
CNTNAP4Q9C0A0 AC117470.1-201ENST00000381974 330 ntBASIC5.32□□□□□ -1.56
CNTNAP4Q9C0A0 MTCYBP4-201ENST00000401524 249 ntBASIC5.32□□□□□ -1.56
CNTNAP4Q9C0A0 UBE2V1P13-201ENST00000436983 439 ntBASIC5.32□□□□□ -1.56
CNTNAP4Q9C0A0 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC5.32□□□□□ -1.56
CNTNAP4Q9C0A0 AC006512.1-201ENST00000468816 291 ntBASIC5.32□□□□□ -1.56
CNTNAP4Q9C0A0 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC5.32□□□□□ -1.56
CNTNAP4Q9C0A0 TTC39CP1-201ENST00000512513 755 ntBASIC5.32□□□□□ -1.56
CNTNAP4Q9C0A0 AC018797.3-201ENST00000513388 1241 ntBASIC5.32□□□□□ -1.56
CNTNAP4Q9C0A0 AC017037.2-201ENST00000513850 890 ntBASIC5.32□□□□□ -1.56
CNTNAP4Q9C0A0 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC5.32□□□□□ -1.56
CNTNAP4Q9C0A0 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CNTNAP4Q9C0A0 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC5.32□□□□□ -1.56
CNTNAP4Q9C0A0 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CNTNAP4Q9C0A0 AC120057.2-201ENST00000571520 271 ntBASIC5.32□□□□□ -1.56
CNTNAP4Q9C0A0 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC5.32□□□□□ -1.56
CNTNAP4Q9C0A0 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC5.32□□□□□ -1.56
CNTNAP4Q9C0A0 AC244100.1-202ENST00000621554 382 ntBASIC5.32□□□□□ -1.56
CNTNAP4Q9C0A0 AL354798.1-201ENST00000622505 329 ntBASIC5.32□□□□□ -1.56
CNTNAP4Q9C0A0 AC079597.1-201ENST00000624306 508 ntBASIC5.32□□□□□ -1.56
CNTNAP4Q9C0A0 TEX41-300ENST00000631048 69 ntTSL 5 BASIC5.32□□□□□ -1.56
CNTNAP4Q9C0A0 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CNTNAP4Q9C0A0 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CNTNAP4Q9C0A0 FAM91A3P-201ENST00000456826 2544 ntBASIC5.32□□□□□ -1.56
CNTNAP4Q9C0A0 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CNTNAP4Q9C0A0 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC5.32□□□□□ -1.56
CNTNAP4Q9C0A0 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.32□□□□□ -1.56
CNTNAP4Q9C0A0 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
CNTNAP4Q9C0A0 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CNTNAP4Q9C0A0 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC5.32□□□□□ -1.56
CNTNAP4Q9C0A0 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms